SRR15607250 - not collected

Basic Information

Run: SRR15607250

Assay Type: AMPLICON

Biosample: SAMN15548364

Bytes: 14264036

Center Name: HEBEI UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA646618

Geographic Information

Country: China

Continent: Asia

Location Name: China:Hebei

Latitude/Longitude: missing

Sample Information

Host: not collected

Isolation: -

Biosample Model: -

Collection Date: 2019-09-13

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

Download

VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR15607250

13.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 75

Chemoheterotrophy

Fermentation 43

Fermentation

Aerobic_Chemoheterotrophy 34

Aerobic_Chemoheterotrophy

Nitrate_Reduction 12

Nitrate_Reduction

Aromatic_Compound_Degradation 9

Aromatic_Compound_Degradation

Human_Associated 6

Human_Associated

Animal_Parasites_Or_Symbionts 6

Animal_Parasites_Or_Symbionts

Nitrate_Respiration 6

Nitrate_Respiration

Nitrogen_Respiration 6

Nitrogen_Respiration

Human_Gut 5

Human_Gut

Mammal_Gut 5

Mammal_Gut

Ureolysis 5

Ureolysis

Nitrate_Denitrification 4

Nitrate_Denitrification

Nitrite_Denitrification 4

Nitrite_Denitrification

Denitrification 4

Denitrification

Dark_Hydrogen_Oxidation 4

Dark_Hydrogen_Oxidation

Nitrite_Respiration 4

Nitrite_Respiration

Methanol_Oxidation 3

Methanol_Oxidation

Methylotrophy 3

Methylotrophy

Sulfate_Respiration 2

Sulfate_Respiration

Respiration_Of_Sulfur_Compounds 2

Respiration_Of_Sulfur_Compounds

Human_Pathogens_All 2

Human_Pathogens_All

Aromatic_Hydrocarbon_Degradation 2

Aromatic_Hydrocarbon_Degradation

Hydrocarbon_Degradation 2

Hydrocarbon_Degradation

Plastic_Degradation 2

Plastic_Degradation

Methanogenesis_By_Co2_Reduction_With_H2 1

Methanogenesis_By_Co2_Reduction_With_H2

Hydrogenotrophic_Methanogenesis 1

Hydrogenotrophic_Methanogenesis

Methanogenesis 1

Methanogenesis

Nitrogen_Fixation 1

Nitrogen_Fixation

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