SRR15419895 - Paederus fuscipes

Basic Information

Run: SRR15419895

Assay Type: AMPLICON

Biosample: SAMN20518724

Bytes: 13982962

Center Name: CHINA WEST NORMAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina NovaSeq 6000

Library Layout: PAIRED

Bioproject: PRJNA751464

Geographic Information

Country: China

Continent: Asia

Location Name: China: Nanchong

Latitude/Longitude: 30.81 N 106.06 E

Sample Information

Host: Paederus fuscipes

Isolation: -

Biosample Model: -

Collection Date: 2019-10-05T11:05:07Z

Host Sex: -

Environmental Information

Broad Scale: Endosymbiotic bacteria of Paederus fuscipes

Local Scale: Endosymbionts

Medium: Endosymbionts

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR15419895
13.3 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 21
Aerobic_Chemoheterotrophy 11
Fermentation 10
Animal_Parasites_Or_Symbionts 7
Human_Gut 6
Human_Associated 6
Mammal_Gut 6
Methanol_Oxidation 2
Methylotrophy 2
Nitrate_Reduction 2
Intracellular_Parasites 2
Ureolysis 2
Nitrate_Denitrification 1
Nitrite_Denitrification 1
Denitrification 1
Dark_Hydrogen_Oxidation 1
Nitrite_Respiration 1
Dark_Oxidation_Of_Sulfur_Compounds 1
Human_Pathogens_All 1
Plant_Pathogen 1
Nitrate_Respiration 1
Nitrogen_Respiration 1
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