SRR15332013 - Drosophila melanogaster

Basic Information

Run: SRR15332013

Assay Type: AMPLICON

Biosample: SAMN20524413

Bytes: 7561651

Center Name: SHANGHAI INSTITUTE OF PLANT PHYSIOLOGY AND ECOLOGY, CAS

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Bioproject: PRJNA751631

Geographic Information

Country: China

Continent: Asia

Location Name: China:Shanghai

Latitude/Longitude: 31.2 N 121.4 E

Sample Information

Host: Drosophila melanogaster

Isolation: -

Biosample Model: -

Collection Date: 2024-03-21

Host Sex: female

Environmental Information

Broad Scale: Fruit fly body surface

Local Scale: Ten days post eclosion

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR15332013
7.2 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 4
Aerobic_Chemoheterotrophy 2
Fermentation 1
Aromatic_Hydrocarbon_Degradation 1
Aromatic_Compound_Degradation 1
Hydrocarbon_Degradation 1
Ureolysis 1
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