SRR14646262 - Apis mellifera scutellata x spp.

Basic Information

Run: SRR14646262

Assay Type: AMPLICON

Biosample: SAMN19328791

Bytes: 26292467

Center Name: LAPOA-FEDERAL UNIVERSITY OF PARAIBA (UFPB)

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA732391

Geographic Information

Country: Brazil

Continent: South America

Location Name: Brazil: PARAIBA,AREIA

Latitude/Longitude: 6.972298 S 35.721283 W

Sample Information

Host: Apis mellifera scutellata x spp.

Isolation: -

Biosample Model: -

Collection Date: 2019-01-01

Host Sex: -

Environmental Information

Broad Scale: Atlantic Forest

Local Scale: Bee-gut

Medium: Insect gut content

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR14646262
25.1 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Fermentation 27
Chemoheterotrophy 27
Aerobic_Chemoheterotrophy 6
Nitrate_Reduction 6
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