SRR14350750 - Drosophila melanogaster

Basic Information

Run: SRR14350750

Assay Type: AMPLICON

Biosample: SAMN18914798

Bytes: 76229853

Center Name: WEST CHESTER UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA725902

Geographic Information

Country: Canada

Continent: North America

Location Name: Canada: Nunavut

Latitude/Longitude: 68.87 N 93.13 W

Sample Information

Host: Drosophila melanogaster

Isolation: -

Biosample Model: -

Collection Date: 2020-08-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR14350750
72.7 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 119
Fermentation 79
Aerobic_Chemoheterotrophy 39
Animal_Parasites_Or_Symbionts 34
Human_Associated 14
Nitrate_Respiration 10
Nitrate_Reduction 10
Nitrogen_Respiration 10
Human_Pathogens_All 9
Sulfate_Respiration 6
Respiration_Of_Sulfur_Compounds 6
Human_Gut 5
Mammal_Gut 5
Aromatic_Compound_Degradation 5
Methanol_Oxidation 2
Methylotrophy 2
Nitrate_Denitrification 2
Nitrite_Denitrification 2
Denitrification 2
Dark_Hydrogen_Oxidation 2
Nitrite_Respiration 2
Nitrogen_Fixation 1
Photosynthetic_Cyanobacteria 1
Oxygenic_Photoautotrophy 1
Photoautotrophy 1
Phototrophy 1
Ureolysis 1
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