SRR13162414 - Sargassum

Basic Information

Run: SRR13162414

Assay Type: AMPLICON

Biosample: SAMN14833234

Bytes: 485982

Center Name: MAX PLANCK INSTITUTE FOR TERRESTRIAL MICROBIOLOGY

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: SINGLE

Bioproject: PRJNA630532

Geographic Information

Country: France

Continent: Europe

Location Name: France: Guadeloupe

Latitude/Longitude: 16.205037 N 61.49697 W

Sample Information

Host: Sargassum

Isolation: -

Biosample Model: -

Collection Date: 2018-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR13162414

474.6 KB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

No functional annotation data available

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