SRR1300755 - None

Basic Information

Run: SRR1300755

Assay Type: AMPLICON

Biosample: SAMN02799485

Bytes: 222891410

Center Name: THE UNIVERSITY OF QUEENSLAND

Classification: 16S

Sequencing Information

Instrument: 454 GS FLX Titanium

Library Layout: SINGLE

Bioproject: PRJNA248567

Geographic Information

Country: Australia

Continent: Oceania

Location Name: Australia: Queensland""US, North America

Sample Information

Host: -

Isolation: -

Biosample Model: -

Collection Date: 2012\, 2011\, 2008

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR1300755
212.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 80
Fermentation 65
Reductive_Acetogenesis 21
Methanogenesis 14
Hydrogenotrophic_Methanogenesis 13
Dark_Hydrogen_Oxidation 11
Methanogenesis_By_Co2_Reduction_With_H2 6
Aerobic_Chemoheterotrophy 6
Methanogenesis_By_Reduction_Of_Methyl_Compounds_With_H2 2
Methylotrophy 2
Nitrogen_Fixation 2
Intracellular_Parasites 2
Nonphotosynthetic_Cyanobacteria 2
Ureolysis 2
Methanogenesis_By_Disproportionation_Of_Methyl_Groups 1
Methanogenesis_Using_Formate 1
Sulfate_Respiration 1
Respiration_Of_Sulfur_Compounds 1
Photosynthetic_Cyanobacteria 1
Oxygenic_Photoautotrophy 1
Photoautotrophy 1
Phototrophy 1
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