SRR12794456 - Antheraea assamensis Helfer

Basic Information

Run: SRR12794456

Assay Type: CLONE

Biosample: SAMN16396679

Bytes: 81064051

Center Name: CENTRAL MUGA ERI RESEARCH AND TRAINING INSTITUTE, CENTRAL SILK BOARD, MINISTRY OF TEXTILES, GOI

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA668103

Geographic Information

Country: India

Continent: Asia

Location Name: India: Meghalaya

Sample Information

Host: Antheraea assamensis Helfer

Isolation: -

Biosample Model: -

Collection Date: 2018-10-30

Host Sex: -

Environmental Information

Broad Scale: Silkowrm

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR12794456
77.3 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 96
Aerobic_Chemoheterotrophy 71
Aromatic_Compound_Degradation 24
Nitrate_Reduction 15
Fermentation 13
Ureolysis 11
Methanol_Oxidation 9
Methylotrophy 9
Animal_Parasites_Or_Symbionts 6
Nitrate_Respiration 6
Nitrogen_Respiration 6
Human_Associated 5
Aliphatic_Non_Methane_Hydrocarbon_Degradation 5
Hydrocarbon_Degradation 5
Nitrate_Denitrification 4
Nitrite_Denitrification 4
Denitrification 4
Nitrite_Respiration 4
Human_Pathogens_All 4
Predatory_Or_Exoparasitic 4
Dark_Sulfide_Oxidation 3
Dark_Sulfur_Oxidation 3
Dark_Thiosulfate_Oxidation 3
Dark_Oxidation_Of_Sulfur_Compounds 3
Nitrogen_Fixation 1
Human_Pathogens_Nosocomia 1
Human_Gut 1
Mammal_Gut 1
Nonphotosynthetic_Cyanobacteria 1
Photosynthetic_Cyanobacteria 1
Oxygenic_Photoautotrophy 1
Photoautotrophy 1
Phototrophy 1
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