SRR12656161 - Pyractomena borealis
Basic Information
Run: SRR12656161
Assay Type: AMPLICON
Biosample: SAMN14678243
Bytes: 30295678
Center Name: UNIVERSITY OF CONNECTICUT
Classification: 16S
Sequencing Information
Instrument: Illumina MiSeq
Library Layout: PAIRED
Bioproject: PRJNA563849
Geographic Information
Country: USA
Continent: North America
Location Name: USA: Raised in Smedley lab, Trinity College, Hartford, Connecticut
Latitude/Longitude: missing
Sample Information
Environmental Information
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR12656161
28.9 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
28
Chemoheterotrophy
Aerobic_Chemoheterotrophy
22
Aerobic_Chemoheterotrophy
Fermentation
6
Fermentation
Aromatic_Compound_Degradation
6
Aromatic_Compound_Degradation
Nitrate_Reduction
5
Nitrate_Reduction
Nitrate_Respiration
3
Nitrate_Respiration
Nitrogen_Respiration
3
Nitrogen_Respiration
Methanol_Oxidation
2
Methanol_Oxidation
Methylotrophy
2
Methylotrophy
Nitrate_Denitrification
2
Nitrate_Denitrification
Nitrite_Denitrification
2
Nitrite_Denitrification
Denitrification
2
Denitrification
Dark_Hydrogen_Oxidation
2
Dark_Hydrogen_Oxidation
Nitrogen_Fixation
2
Nitrogen_Fixation
Nitrite_Respiration
2
Nitrite_Respiration
Aerobic_Ammonia_Oxidation
1
Aerobic_Ammonia_Oxidation
Nitrification
1
Nitrification
Plant_Pathogen
1
Plant_Pathogen
Intracellular_Parasites
1
Intracellular_Parasites
Photoheterotrophy
1
Photoheterotrophy
Phototrophy
1
Phototrophy
Ureolysis
1
Ureolysis
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