SRR12656142 - Photuris sp.

Basic Information

Run: SRR12656142

Assay Type: AMPLICON

Biosample: SAMN14678032

Bytes: 5930478

Center Name: UNIVERSITY OF CONNECTICUT

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA563849

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: missing

Latitude/Longitude: missing

Sample Information

Host: Photuris sp.

Isolation: -

Biosample Model: -

Collection Date: 2017-03-18

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

Download
OTU Sequences

FASTA file of OTU sequences

Download
FAPROTAX Report

Functional annotation of Amplicon

Download
VSEARCH Taxon

VSEARCH taxonomic composition classification

Download
QIIME Taxon

QIIME2 taxonomic composition classification

Download

Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR12656142
5.7 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Aerobic_Chemoheterotrophy 34
Chemoheterotrophy 34
Nitrate_Respiration 5
Nitrate_Reduction 5
Nitrogen_Respiration 5
Nitrogen_Fixation 4
Aromatic_Compound_Degradation 4
Aerobic_Ammonia_Oxidation 3
Nitrification 3
Human_Pathogens_All 3
Human_Associated 3
Animal_Parasites_Or_Symbionts 3
Intracellular_Parasites 3
Ureolysis 3
Nitrate_Denitrification 2
Nitrite_Denitrification 2
Denitrification 2
Nitrite_Respiration 2
Dark_Oxidation_Of_Sulfur_Compounds 2
Predatory_Or_Exoparasitic 2
Methanol_Oxidation 1
Methylotrophy 1
Dark_Hydrogen_Oxidation 1
Dark_Sulfide_Oxidation 1
Dark_Sulfur_Oxidation 1
Dark_Thiosulfate_Oxidation 1
Nonphotosynthetic_Cyanobacteria 1
Back to Amplicons List
Back to Table