SRR12656080 - Ellychnia corrusca

Basic Information

Run: SRR12656080

Assay Type: AMPLICON

Biosample: SAMN14678088

Bytes: 17064174

Center Name: UNIVERSITY OF CONNECTICUT

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA563849

Quality Control Information

Filter Percentage: 0.9692

QC Average Length: -

Retained Reads: 3468

Geographic Information

Country: USA

Continent: North America

Location Name: USA: 109 Wales Road Andover, CT

Latitude/Longitude: missing

Sample Information

Host: Ellychnia corrusca

Isolation: -

Biosample Model: -

Collection Date: 2017-05-23

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR12656080
16.3 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 7
Aerobic_Chemoheterotrophy 4
Fermentation 2
Methanol_Oxidation 1
Methylotrophy 1
Nitrate_Denitrification 1
Nitrite_Denitrification 1
Denitrification 1
Nitrite_Respiration 1
Nitrate_Respiration 1
Nitrate_Reduction 1
Nitrogen_Respiration 1
Photosynthetic_Cyanobacteria 1
Oxygenic_Photoautotrophy 1
Photoautotrophy 1
Phototrophy 1
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