SRR11450917 - Halyomorpha halys

Basic Information

Run: SRR11450917

Assay Type: RNA-Seq

Biosample: SAMN14483515

Bytes: 45252084

Center Name: KAUST

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA616191

Geographic Information

Country: Italy

Continent: Europe

Location Name: Italy

Latitude/Longitude: 45.05 N 7.58 E

Sample Information

Host: Halyomorpha halys

Isolation: -

Biosample Model: -

Collection Date: 2018-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR11450917
43.2 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 129
Aerobic_Chemoheterotrophy 99
Aromatic_Compound_Degradation 78
Fermentation 30
Nitrogen_Fixation 13
Nonphotosynthetic_Cyanobacteria 1
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