SRR11434324 - N. vitripennis

Basic Information

Run: SRR11434324

Assay Type: AMPLICON

Biosample: SAMN14333017

Bytes: 16252084

Center Name: HARVARD UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA611497

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: Not applicable

Sample Information

Host: N. vitripennis

Isolation: -

Biosample Model: -

Collection Date: 2024-08-15

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR11434324
15.5 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 57
Aerobic_Chemoheterotrophy 34
Fermentation 24
Animal_Parasites_Or_Symbionts 14
Human_Associated 12
Nitrate_Reduction 10
Human_Pathogens_All 6
Human_Gut 6
Mammal_Gut 6
Aromatic_Compound_Degradation 5
Nitrate_Respiration 5
Nitrogen_Respiration 5
Human_Pathogens_Nosocomia 2
Ureolysis 2
Methanol_Oxidation 1
Methylotrophy 1
Nitrate_Denitrification 1
Nitrite_Denitrification 1
Denitrification 1
Dark_Hydrogen_Oxidation 1
Nitrite_Respiration 1
Human_Pathogens_Septicemia 1
Human_Pathogens_Pneumonia 1
Aromatic_Hydrocarbon_Degradation 1
Hydrocarbon_Degradation 1
Intracellular_Parasites 1
Aerobic_Anoxygenic_Phototrophy 1
Photoheterotrophy 1
Phototrophy 1
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