SRR11426245 - Harmonia axyridis

Basic Information

Run: SRR11426245

Assay Type: AMPLICON

Biosample: SAMN14450482

Bytes: 19176072

Center Name: COTTON RESEARCH INSTITUTE

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA615301

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: missing

Sample Information

Host: Harmonia axyridis

Isolation: -

Biosample Model: -

Collection Date: missing

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR11426245

18.3 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 59

Chemoheterotrophy

Aerobic_Chemoheterotrophy 45

Aerobic_Chemoheterotrophy

Fermentation 12

Fermentation

Human_Associated 9

Human_Associated

Animal_Parasites_Or_Symbionts 9

Animal_Parasites_Or_Symbionts

Aromatic_Compound_Degradation 9

Aromatic_Compound_Degradation

Nitrate_Reduction 9

Nitrate_Reduction

Nitrogen_Respiration 6

Nitrogen_Respiration

Human_Gut 5

Human_Gut

Mammal_Gut 5

Mammal_Gut

Nitrate_Respiration 5

Nitrate_Respiration

Human_Pathogens_All 4

Human_Pathogens_All

Methylotrophy 2

Methylotrophy

Nitrite_Denitrification 2

Nitrite_Denitrification

Denitrification 2

Denitrification

Dark_Hydrogen_Oxidation 2

Dark_Hydrogen_Oxidation

Nitrite_Respiration 2

Nitrite_Respiration

Hydrocarbon_Degradation 2

Hydrocarbon_Degradation

Photosynthetic_Cyanobacteria 2

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 2

Oxygenic_Photoautotrophy

Photoautotrophy 2

Photoautotrophy

Phototrophy 2

Phototrophy

Ureolysis 2

Ureolysis

Methanotrophy 1

Methanotrophy

Methanol_Oxidation 1

Methanol_Oxidation

Nitrate_Denitrification 1

Nitrate_Denitrification

Chitinolysis 1

Chitinolysis

Xylanolysis 1

Xylanolysis

Dark_Oxidation_Of_Sulfur_Compounds 1

Dark_Oxidation_Of_Sulfur_Compounds

Human_Pathogens_Nosocomia 1

Human_Pathogens_Nosocomia

Plant_Pathogen 1

Plant_Pathogen

Aromatic_Hydrocarbon_Degradation 1

Aromatic_Hydrocarbon_Degradation

Predatory_Or_Exoparasitic 1

Predatory_Or_Exoparasitic

Reductive_Acetogenesis 1

Reductive_Acetogenesis

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