SRR11426228 - Harmonia axyridis

Basic Information

Run: SRR11426228

Assay Type: AMPLICON

Biosample: SAMN14450498

Bytes: 14594873

Center Name: COTTON RESEARCH INSTITUTE

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA615301

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: missing

Sample Information

Host: Harmonia axyridis

Isolation: -

Biosample Model: -

Collection Date: missing

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR11426228
13.9 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 53
Aerobic_Chemoheterotrophy 39
Fermentation 14
Nitrate_Reduction 11
Animal_Parasites_Or_Symbionts 10
Human_Associated 9
Aromatic_Compound_Degradation 8
Human_Gut 6
Mammal_Gut 6
Nitrate_Respiration 6
Nitrogen_Respiration 6
Human_Pathogens_All 4
Ureolysis 3
Methanol_Oxidation 2
Methylotrophy 2
Nitrate_Denitrification 2
Nitrite_Denitrification 2
Denitrification 2
Dark_Hydrogen_Oxidation 2
Nitrogen_Fixation 2
Nitrite_Respiration 2
Dark_Oxidation_Of_Sulfur_Compounds 1
Invertebrate_Parasites 1
Photosynthetic_Cyanobacteria 1
Oxygenic_Photoautotrophy 1
Photoautotrophy 1
Phototrophy 1
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