SRR11426226 - Harmonia axyridis

Basic Information

Run: SRR11426226

Assay Type: AMPLICON

Biosample: SAMN14450500

Bytes: 17032476

Center Name: COTTON RESEARCH INSTITUTE

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA615301

Quality Control Information

Filter Percentage: 0.0036

QC Average Length: 301

Retained Reads: 100254

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: missing

Sample Information

Host: Harmonia axyridis

Isolation: -

Biosample Model: -

Collection Date: missing

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR11426226

16.2 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 37

Chemoheterotrophy

Aerobic_Chemoheterotrophy 27

Aerobic_Chemoheterotrophy

Fermentation 8

Fermentation

Nitrate_Reduction 8

Nitrate_Reduction

Animal_Parasites_Or_Symbionts 6

Animal_Parasites_Or_Symbionts

Aromatic_Compound_Degradation 6

Aromatic_Compound_Degradation

Human_Associated 4

Human_Associated

Methylotrophy 3

Methylotrophy

Nitrate_Respiration 3

Nitrate_Respiration

Nitrogen_Respiration 3

Nitrogen_Respiration

Methanotrophy 2

Methanotrophy

Human_Pathogens_All 2

Human_Pathogens_All

Human_Gut 2

Human_Gut

Mammal_Gut 2

Mammal_Gut

Hydrocarbon_Degradation 2

Hydrocarbon_Degradation

Methanol_Oxidation 1

Methanol_Oxidation

Nitrate_Denitrification 1

Nitrate_Denitrification

Nitrite_Denitrification 1

Nitrite_Denitrification

Denitrification 1

Denitrification

Dark_Hydrogen_Oxidation 1

Dark_Hydrogen_Oxidation

Nitrogen_Fixation 1

Nitrogen_Fixation

Nitrite_Respiration 1

Nitrite_Respiration

Invertebrate_Parasites 1

Invertebrate_Parasites

Photosynthetic_Cyanobacteria 1

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 1

Oxygenic_Photoautotrophy

Photoautotrophy 1

Photoautotrophy

Phototrophy 1

Phototrophy

Ureolysis 1

Ureolysis

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