SRR11426211 - Harmonia axyridis

Basic Information

Run: SRR11426211

Assay Type: AMPLICON

Biosample: SAMN14450513

Bytes: 16563411

Center Name: COTTON RESEARCH INSTITUTE

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA615301

Quality Control Information

Filter Percentage: 0.0031

QC Average Length: 301

Retained Reads: 98182

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: missing

Sample Information

Host: Harmonia axyridis

Isolation: -

Biosample Model: -

Collection Date: missing

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR11426211
15.8 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 7
Aerobic_Chemoheterotrophy 4
Nitrate_Reduction 4
Fermentation 2
Methanol_Oxidation 1
Methylotrophy 1
Human_Pathogens_All 1
Human_Associated 1
Animal_Parasites_Or_Symbionts 1
Nitrate_Respiration 1
Nitrogen_Respiration 1
Ureolysis 1
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