SRR11426204 - Harmonia axyridis

Basic Information

Run: SRR11426204

Assay Type: AMPLICON

Biosample: SAMN14450477

Bytes: 16975348

Center Name: COTTON RESEARCH INSTITUTE

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA615301

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: missing

Sample Information

Host: Harmonia axyridis

Isolation: -

Biosample Model: -

Collection Date: missing

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR11426204

16.2 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 117

Chemoheterotrophy

Aerobic_Chemoheterotrophy 82

Aerobic_Chemoheterotrophy

Fermentation 30

Fermentation

Nitrate_Reduction 19

Nitrate_Reduction

Animal_Parasites_Or_Symbionts 16

Animal_Parasites_Or_Symbionts

Human_Associated 15

Human_Associated

Aromatic_Compound_Degradation 13

Aromatic_Compound_Degradation

Human_Pathogens_All 10

Human_Pathogens_All

Ureolysis 10

Ureolysis

Nitrate_Respiration 8

Nitrate_Respiration

Nitrogen_Respiration 8

Nitrogen_Respiration

Human_Gut 5

Human_Gut

Mammal_Gut 5

Mammal_Gut

Methanol_Oxidation 4

Methanol_Oxidation

Methylotrophy 4

Methylotrophy

Nitrate_Denitrification 3

Nitrate_Denitrification

Nitrite_Denitrification 3

Nitrite_Denitrification

Denitrification 3

Denitrification

Chitinolysis 3

Chitinolysis

Nitrite_Respiration 3

Nitrite_Respiration

Dark_Oxidation_Of_Sulfur_Compounds 3

Dark_Oxidation_Of_Sulfur_Compounds

Photosynthetic_Cyanobacteria 3

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 3

Oxygenic_Photoautotrophy

Photoautotrophy 3

Photoautotrophy

Phototrophy 3

Phototrophy

Dark_Hydrogen_Oxidation 2

Dark_Hydrogen_Oxidation

Dark_Sulfide_Oxidation 2

Dark_Sulfide_Oxidation

Dark_Sulfur_Oxidation 2

Dark_Sulfur_Oxidation

Dark_Thiosulfate_Oxidation 2

Dark_Thiosulfate_Oxidation

Predatory_Or_Exoparasitic 2

Predatory_Or_Exoparasitic

Aerobic_Ammonia_Oxidation 1

Aerobic_Ammonia_Oxidation

Nitrification 1

Nitrification

Nitrogen_Fixation 1

Nitrogen_Fixation

Xylanolysis 1

Xylanolysis

Manganese_Oxidation 1

Manganese_Oxidation

Invertebrate_Parasites 1

Invertebrate_Parasites

Human_Pathogens_Nosocomia 1

Human_Pathogens_Nosocomia

Human_Pathogens_Diarrhea 1

Human_Pathogens_Diarrhea

Aromatic_Hydrocarbon_Degradation 1

Aromatic_Hydrocarbon_Degradation

Hydrocarbon_Degradation 1

Hydrocarbon_Degradation

Intracellular_Parasites 1

Intracellular_Parasites

Reductive_Acetogenesis 1

Reductive_Acetogenesis

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