SRR11354061 - Nicotiana tabacum
Basic Information
Run: SRR11354061
Assay Type: AMPLICON
Biosample: SAMN14400872
Bytes: 9812428
Center Name: UNIVERSITY OF TEXAS AT ARLINGTON
Classification: 16S
Sequencing Information
Instrument: Illumina MiSeq
Library Layout: PAIRED
Bioproject: PRJNA613319
Quality Control Information
Filter Percentage: 0.0
QC Average Length: -
Retained Reads: -
Geographic Information
Country: USA
Continent: North America
Location Name: USA: North Carolina, Rocky Mount
Latitude/Longitude: 35.9382 N 77.7905 W
Sample Information
Environmental Information
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR11354061
9.4 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
7
Chemoheterotrophy
Aerobic_Chemoheterotrophy
4
Aerobic_Chemoheterotrophy
Nitrate_Reduction
4
Nitrate_Reduction
Fermentation
3
Fermentation
Methanol_Oxidation
2
Methanol_Oxidation
Methylotrophy
2
Methylotrophy
Nitrate_Denitrification
2
Nitrate_Denitrification
Nitrite_Denitrification
2
Nitrite_Denitrification
Denitrification
2
Denitrification
Dark_Hydrogen_Oxidation
2
Dark_Hydrogen_Oxidation
Nitrite_Respiration
2
Nitrite_Respiration
Nitrate_Respiration
2
Nitrate_Respiration
Nitrogen_Respiration
2
Nitrogen_Respiration
Human_Pathogens_All
1
Human_Pathogens_All
Human_Gut
1
Human_Gut
Human_Associated
1
Human_Associated
Mammal_Gut
1
Mammal_Gut
Animal_Parasites_Or_Symbionts
1
Animal_Parasites_Or_Symbionts
Intracellular_Parasites
1
Intracellular_Parasites
Photosynthetic_Cyanobacteria
1
Photosynthetic_Cyanobacteria
Oxygenic_Photoautotrophy
1
Oxygenic_Photoautotrophy
Photoautotrophy
1
Photoautotrophy
Phototrophy
1
Phototrophy
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