SRR10831427 - Araucaria araucana

Basic Information

Run: SRR10831427

Assay Type: AMPLICON

Biosample: SAMN10823064

Bytes: 416600

Center Name: UNIVERSIDAD ANDRES BELLO

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA517193

Quality Control Information

Filter Percentage: 0.0

QC Average Length: -

Retained Reads: -

Geographic Information

Country: Chile

Continent: South America

Location Name: Chile: Ralco

Latitude/Longitude: 37.93518 S 71.36392 W

Sample Information

Host: Araucaria araucana

Isolation: -

Biosample Model: -

Collection Date: 2017-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR10831427
406.8 KB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Fermentation 10
Chemoheterotrophy 10
Animal_Parasites_Or_Symbionts 2
Nitrate_Reduction 2
Human_Pathogens_Diarrhea 1
Human_Pathogens_All 1
Human_Associated 1
Photosynthetic_Cyanobacteria 1
Oxygenic_Photoautotrophy 1
Photoautotrophy 1
Phototrophy 1
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