SRR10830008 - Araucaria araucana

Basic Information

Run: SRR10830008

Assay Type: AMPLICON

Biosample: SAMN10822876

Bytes: 8772916

Center Name: UNIVERSIDAD ANDRES BELLO

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA517193

Geographic Information

Country: Chile

Continent: South America

Location Name: Chile: Trongol

Latitude/Longitude: 37.69487 S 73.12185 W

Sample Information

Host: Araucaria araucana

Isolation: -

Biosample Model: -

Collection Date: 2017-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR10830008
8.4 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 27
Aerobic_Chemoheterotrophy 18
Nitrogen_Fixation 3
Xylanolysis 1
Manganese_Oxidation 1
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