SRR10765626 - missing

Basic Information

Run: SRR10765626

Assay Type: AMPLICON

Biosample: SAMN13679023

Bytes: 22311869

Center Name: NANJING AGRICULTURAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA597588

Quality Control Information

Filter Percentage: 0.0011

QC Average Length: 301

Retained Reads: 143212

Geographic Information

Country: Japan

Continent: Asia

Location Name: Japan: Ichikikushikino

Sample Information

Host: missing

Isolation: -

Biosample Model: -

Collection Date: 2017-05-29

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR10765626
21.3 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 36
Aerobic_Chemoheterotrophy 33
Aromatic_Compound_Degradation 9
Human_Associated 7
Animal_Parasites_Or_Symbionts 7
Intracellular_Parasites 7
Human_Pathogens_All 6
Nitrate_Reduction 5
Nitrate_Respiration 3
Nitrogen_Respiration 3
Ureolysis 3
Methanol_Oxidation 2
Methylotrophy 2
Nitrogen_Fixation 1
Fermentation 1
Human_Gut 1
Mammal_Gut 1
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