SRR10765607 - missing

Basic Information

Run: SRR10765607

Assay Type: AMPLICON

Biosample: SAMN13679041

Bytes: 21881636

Center Name: NANJING AGRICULTURAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA597588

Quality Control Information

Filter Percentage: 0.0009

QC Average Length: 301

Retained Reads: 141690

Geographic Information

Country: Japan

Continent: Asia

Location Name: Japan: Sapporo

Sample Information

Host: missing

Isolation: -

Biosample Model: -

Collection Date: 2017-08-30

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR10765607
20.9 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Fermentation 55
Chemoheterotrophy 55
Animal_Parasites_Or_Symbionts 16
Human_Gut 11
Human_Associated 11
Mammal_Gut 11
Sulfate_Respiration 3
Respiration_Of_Sulfur_Compounds 3
Dark_Hydrogen_Oxidation 2
Nitrate_Reduction 2
Xylanolysis 1
Invertebrate_Parasites 1
Human_Pathogens_Diarrhea 1
Human_Pathogens_All 1
Nitrate_Respiration 1
Nitrogen_Respiration 1
Reductive_Acetogenesis 1
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