SRR10688404 - None

Basic Information

Run: SRR10688404

Assay Type: AMPLICON

Biosample: SAMN13558475

Bytes: 16737001

Center Name: SHANGHAI NORMAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina MiniSeq

Library Layout: PAIRED

Bioproject: PRJNA595480

Geographic Information

Sample Information

Host: -

Isolation: -

Biosample Model: -

Collection Date: -

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR10688404
16.0 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 35
Fermentation 20
Aerobic_Chemoheterotrophy 14
Animal_Parasites_Or_Symbionts 11
Human_Associated 9
Nitrate_Reduction 8
Human_Gut 6
Mammal_Gut 6
Human_Pathogens_All 4
Nitrate_Respiration 4
Nitrogen_Respiration 4
Ureolysis 3
Methanol_Oxidation 2
Methylotrophy 2
Aromatic_Compound_Degradation 2
Nitrate_Denitrification 1
Nitrite_Denitrification 1
Denitrification 1
Nitrite_Respiration 1
Xylanolysis 1
Dark_Sulfide_Oxidation 1
Dark_Sulfur_Oxidation 1
Dark_Thiosulfate_Oxidation 1
Dark_Oxidation_Of_Sulfur_Compounds 1
Human_Pathogens_Septicemia 1
Human_Pathogens_Meningitis 1
Human_Pathogens_Diarrhea 1
Plant_Pathogen 1
Predatory_Or_Exoparasitic 1
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