SRR10569570 - Camponotus japonicus

Basic Information

Run: SRR10569570

Assay Type: AMPLICON

Biosample: SAMN13424830

Bytes: 648650785

Center Name: NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA592376

Quality Control Information

Filter Percentage: 0.0027

QC Average Length: 251

Retained Reads: 5674156

Geographic Information

Country: Japan

Continent: Asia

Location Name: Japan: Tsukuba

Latitude/Longitude: 36.2 N 140.1 E

Sample Information

Host: Camponotus japonicus

Isolation: -

Biosample Model: -

Collection Date: 2017-05-11

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR10569570
618.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Aerobic_Chemoheterotrophy 7
Chemoheterotrophy 7
Aromatic_Compound_Degradation 2
Nitrogen_Fixation 1
Nitrate_Reduction 1
Predatory_Or_Exoparasitic 1
Nonphotosynthetic_Cyanobacteria 1
Ureolysis 1
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