SRR10413411 - Aphis gossypii

Basic Information

Run: SRR10413411

Assay Type: OTHER

Biosample: SAMN13189385

Bytes: 11918822

Center Name: BEIJING ACADEMY OF AGRICULTURE AND FORESTRY SCIENCES

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA587357

Geographic Information

Country: China

Continent: Asia

Location Name: China:Beijing

Latitude/Longitude: missing

Sample Information

Host: Aphis gossypii

Isolation: -

Biosample Model: -

Collection Date: 2019-05-13

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR10413411
11.4 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Aerobic_Chemoheterotrophy 21
Chemoheterotrophy 21
Aromatic_Compound_Degradation 16
Nitrate_Reduction 13
Nitrate_Respiration 3
Nitrogen_Respiration 3
Human_Pathogens_All 2
Human_Associated 2
Animal_Parasites_Or_Symbionts 2
Methanol_Oxidation 1
Methylotrophy 1
Nitrate_Denitrification 1
Nitrite_Denitrification 1
Denitrification 1
Dark_Hydrogen_Oxidation 1
Nitrite_Respiration 1
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