SRR10338554 - not applicable

Basic Information

Run: SRR10338554

Assay Type: AMPLICON

Biosample: SAMN13106736

Bytes: 14972993

Center Name: WESTERN SYDNEY UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA579218

Geographic Information

Country: Australia

Continent: Oceania

Location Name: Australia: Menangle, EMAI, NSW

Latitude/Longitude: 34.13 S 150.72 E

Sample Information

Host: not applicable

Isolation: -

Biosample Model: -

Collection Date: 2024-01-15

Host Sex: female

Environmental Information

Broad Scale: not collected

Local Scale: not collected

Medium: air

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR10338554
14.3 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Fermentation 2
Human_Gut 2
Human_Associated 2
Mammal_Gut 2
Animal_Parasites_Or_Symbionts 2
Chemoheterotrophy 2
Human_Pathogens_All 1
Nitrate_Reduction 1
Ureolysis 1
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