SRR10192716 - Icosta americana

Basic Information

Run: SRR10192716

Assay Type: AMPLICON

Biosample: SAMN12858642

Bytes: 17711362

Center Name: MICHIGAN STATE UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA574458

Quality Control Information

Filter Percentage: 0.9968

QC Average Length: -

Retained Reads: 316

Geographic Information

Country: USA

Continent: North America

Location Name: USA:Little Gap Banding Station

Latitude/Longitude: 40.8 N 75.529 W

Sample Information

Host: Icosta americana

Isolation: -

Biosample Model: -

Collection Date: 2015-11-23

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR10192716
16.9 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

No functional annotation data available

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