SRR10120010 - None

Basic Information

Run: SRR10120010

Assay Type: AMPLICON

Biosample: SAMN12748541

Bytes: 133800771

Center Name: CENTRAL SILK BOARD

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Bioproject: PRJNA565505

Geographic Information

Latitude/Longitude: 23.46 N 85.31 E

Sample Information

Host: -

Isolation: -

Biosample Model: -

Collection Date: 2024-10-18

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR10120010

127.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 138

Chemoheterotrophy

Aerobic_Chemoheterotrophy 100

Aerobic_Chemoheterotrophy

Fermentation 30

Fermentation

Nitrate_Reduction 24

Nitrate_Reduction

Animal_Parasites_Or_Symbionts 15

Animal_Parasites_Or_Symbionts

Aromatic_Compound_Degradation 15

Aromatic_Compound_Degradation

Human_Associated 14

Human_Associated

Human_Pathogens_All 13

Human_Pathogens_All

Nitrate_Respiration 10

Nitrate_Respiration

Nitrogen_Respiration 10

Nitrogen_Respiration

Ureolysis 10

Ureolysis

Methanol_Oxidation 7

Methanol_Oxidation

Methylotrophy 7

Methylotrophy

Nitrogen_Fixation 4

Nitrogen_Fixation

Aerobic_Ammonia_Oxidation 3

Aerobic_Ammonia_Oxidation

Nitrification 3

Nitrification

Nitrate_Denitrification 3

Nitrate_Denitrification

Nitrite_Denitrification 3

Nitrite_Denitrification

Denitrification 3

Denitrification

Nitrite_Respiration 3

Nitrite_Respiration

Hydrocarbon_Degradation 3

Hydrocarbon_Degradation

Phototrophy 3

Phototrophy

Dark_Hydrogen_Oxidation 2

Dark_Hydrogen_Oxidation

Dark_Oxidation_Of_Sulfur_Compounds 2

Dark_Oxidation_Of_Sulfur_Compounds

Human_Pathogens_Nosocomia 2

Human_Pathogens_Nosocomia

Human_Gut 2

Human_Gut

Mammal_Gut 2

Mammal_Gut

Aliphatic_Non_Methane_Hydrocarbon_Degradation 2

Aliphatic_Non_Methane_Hydrocarbon_Degradation

Nonphotosynthetic_Cyanobacteria 2

Nonphotosynthetic_Cyanobacteria

Photoautotrophy 2

Photoautotrophy

Photoheterotrophy 2

Photoheterotrophy

Dark_Sulfide_Oxidation 1

Dark_Sulfide_Oxidation

Invertebrate_Parasites 1

Invertebrate_Parasites

Human_Pathogens_Septicemia 1

Human_Pathogens_Septicemia

Human_Pathogens_Pneumonia 1

Human_Pathogens_Pneumonia

Aromatic_Hydrocarbon_Degradation 1

Aromatic_Hydrocarbon_Degradation

Dark_Iron_Oxidation 1

Dark_Iron_Oxidation

Iron_Respiration 1

Iron_Respiration

Photosynthetic_Cyanobacteria 1

Photosynthetic_Cyanobacteria

Anoxygenic_Photoautotrophy_H2_Oxidizing 1

Anoxygenic_Photoautotrophy_H2_Oxidizing

Anoxygenic_Photoautotrophy_S_Oxidizing 1

Anoxygenic_Photoautotrophy_S_Oxidizing

Anoxygenic_Photoautotrophy 1

Anoxygenic_Photoautotrophy

Oxygenic_Photoautotrophy 1

Oxygenic_Photoautotrophy

Aerobic_Anoxygenic_Phototrophy 1

Aerobic_Anoxygenic_Phototrophy

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