SRR10119795 - None

Basic Information

Run: SRR10119795

Assay Type: AMPLICON

Biosample: SAMN12748541

Bytes: 174020998

Center Name: CENTRAL SILK BOARD

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Bioproject: PRJNA565476

Geographic Information

Latitude/Longitude: 23.46 N 85.31 E

Sample Information

Host: -

Isolation: -

Biosample Model: -

Collection Date: 2024-10-18

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR10119795

166.0 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 178

Chemoheterotrophy

Aerobic_Chemoheterotrophy 126

Aerobic_Chemoheterotrophy

Fermentation 35

Fermentation

Nitrate_Reduction 26

Nitrate_Reduction

Animal_Parasites_Or_Symbionts 23

Animal_Parasites_Or_Symbionts

Human_Associated 19

Human_Associated

Human_Pathogens_All 18

Human_Pathogens_All

Ureolysis 17

Ureolysis

Aromatic_Compound_Degradation 16

Aromatic_Compound_Degradation

Nitrate_Respiration 14

Nitrate_Respiration

Nitrogen_Respiration 14

Nitrogen_Respiration

Methylotrophy 13

Methylotrophy

Methanol_Oxidation 12

Methanol_Oxidation

Nitrogen_Fixation 6

Nitrogen_Fixation

Hydrocarbon_Degradation 4

Hydrocarbon_Degradation

Predatory_Or_Exoparasitic 4

Predatory_Or_Exoparasitic

Phototrophy 4

Phototrophy

Nitrate_Denitrification 3

Nitrate_Denitrification

Nitrite_Denitrification 3

Nitrite_Denitrification

Denitrification 3

Denitrification

Nitrite_Respiration 3

Nitrite_Respiration

Human_Pathogens_Nosocomia 3

Human_Pathogens_Nosocomia

Aliphatic_Non_Methane_Hydrocarbon_Degradation 3

Aliphatic_Non_Methane_Hydrocarbon_Degradation

Photoautotrophy 3

Photoautotrophy

Sulfate_Respiration 2

Sulfate_Respiration

Respiration_Of_Sulfur_Compounds 2

Respiration_Of_Sulfur_Compounds

Dark_Hydrogen_Oxidation 2

Dark_Hydrogen_Oxidation

Dark_Oxidation_Of_Sulfur_Compounds 2

Dark_Oxidation_Of_Sulfur_Compounds

Intracellular_Parasites 2

Intracellular_Parasites

Nonphotosynthetic_Cyanobacteria 2

Nonphotosynthetic_Cyanobacteria

Photosynthetic_Cyanobacteria 2

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 2

Oxygenic_Photoautotrophy

Photoheterotrophy 2

Photoheterotrophy

Methanotrophy 1

Methanotrophy

Cellulolysis 1

Cellulolysis

Dark_Sulfide_Oxidation 1

Dark_Sulfide_Oxidation

Dark_Sulfur_Oxidation 1

Dark_Sulfur_Oxidation

Dark_Thiosulfate_Oxidation 1

Dark_Thiosulfate_Oxidation

Invertebrate_Parasites 1

Invertebrate_Parasites

Human_Gut 1

Human_Gut

Mammal_Gut 1

Mammal_Gut

Anoxygenic_Photoautotrophy_H2_Oxidizing 1

Anoxygenic_Photoautotrophy_H2_Oxidizing

Anoxygenic_Photoautotrophy 1

Anoxygenic_Photoautotrophy

Aerobic_Anoxygenic_Phototrophy 1

Aerobic_Anoxygenic_Phototrophy

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