DRR182988 - Sinocapritermes mushae

Basic Information

Run: DRR182988

Assay Type: AMPLICON

Biosample: SAMD00172394

Bytes: 22975752

Center Name: NIG

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJDB8349

Geographic Information

Country: Japan

Continent: Asia

Location Name: Japan:Okinawa, Iriomote

Latitude/Longitude: missing

Sample Information

Host: Sinocapritermes mushae

Isolation: -

Biosample Model: -

Collection Date: -

Host Sex: -

Environmental Information

Broad Scale: insect-associated habitat

Local Scale: intestinal

Medium: gut

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
DRR182988
21.9 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 23
Fermentation 15
Sulfate_Respiration 10
Respiration_Of_Sulfur_Compounds 10
Methanogenesis_By_Reduction_Of_Methyl_Compounds_With_H2 6
Hydrogenotrophic_Methanogenesis 6
Methanogenesis 6
Methylotrophy 6
Sulfite_Respiration 2
Dark_Hydrogen_Oxidation 1
Plastic_Degradation 1
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