DRR182970 - Periplaneta japonica

Basic Information

Run: DRR182970

Assay Type: AMPLICON

Biosample: SAMD00172376

Bytes: 14491142

Center Name: NIG

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJDB8349

Geographic Information

Country: Japan

Continent: Asia

Location Name: Japan:Tokyo, Mt. Takao

Latitude/Longitude: missing

Sample Information

Host: Periplaneta japonica

Isolation: -

Biosample Model: -

Collection Date: -

Host Sex: -

Environmental Information

Broad Scale: insect-associated habitat

Local Scale: intestinal

Medium: gut

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

Download
OTU Sequences

FASTA file of OTU sequences

Download
FAPROTAX Report

Functional annotation of Amplicon

Download
VSEARCH Taxon

VSEARCH taxonomic composition classification

Download
QIIME Taxon

QIIME2 taxonomic composition classification

Download

Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
DRR182970
13.8 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 73
Fermentation 64
Respiration_Of_Sulfur_Compounds 6
Sulfate_Respiration 5
Methanogenesis 3
Aerobic_Chemoheterotrophy 3
Methanogenesis_By_Disproportionation_Of_Methyl_Groups 2
Methanogenesis_By_Reduction_Of_Methyl_Compounds_With_H2 1
Hydrogenotrophic_Methanogenesis 1
Methylotrophy 1
Sulfur_Respiration 1
Sulfite_Respiration 1
Intracellular_Parasites 1
Ureolysis 1
Back to Amplicons List
Back to Table