Insect Symbiont Genomes

A comprehensive collection of insect symbiont genomes from both metagenome-assembled genomes (MAGs), literature records and public databases. Our database currently contains 3648 insect symbionts genomes, providing valuable resources for understanding the genomic features and evolution of insect symbionts.

3895 Total Genomes

Genome Sources

Distribution of genome sources

Genome Quality

Distribution of genome quality metrics

Note: The quality score (QS) defined as 'Completeness − 5 × Contamination' estimated with CheckM

Genome Catalog

3895 records

Catalog of insect symbiont genomes and related information.

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Source ID Host Completeness Contamination GTDB Classification Actions
GISB3181 Bifidobacterium sp. W8114
RISB3014 Apis mellifera 97.64% 1.21%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium asteroides
GISB3182 Bifidobacterium sp. W8120
RISB3014 Apis mellifera 97.64% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium apousia
GISB3183 Commensalibacter melissae
RISB3014 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3184 Commensalibacter melissae
RISB3014 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3185 Commensalibacter melissae
RISB3014 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3186 Commensalibacter sp. B14384M2
RISB3014 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3187 Commensalibacter sp. B14384M3
RISB3014 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3188 Commensalibacter sp. M0133
RISB3014 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3189 Commensalibacter sp. M0134
RISB3014 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3190 Commensalibacter sp. M0265
RISB3014 Apis mellifera 99.00% 0.75%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3191 Commensalibacter sp. M0266
RISB3014 Apis mellifera 99.00% 0.75%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3192 Commensalibacter sp. M0267
RISB3014 Apis mellifera 99.00% 0.75%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3193 Commensalibacter sp. M0268
RISB3014 Apis mellifera 99.00% 0.75%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3194 Commensalibacter sp. M0270
RISB3014 Apis mellifera 99.00% 0.75%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3195 Commensalibacter sp. M0355
RISB3014 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3196 Commensalibacter sp. M0357
RISB3014 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3197 Commensalibacter sp. W6292M3
RISB3014 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3198 Commensalibacter sp. W8133
RISB3014 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3199 Commensalibacter sp. W8163
RISB3014 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB3200 Gilliamella sp. B14384G10
RISB3014 Apis mellifera 98.87% 0.56%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella apis_A
GISB3201 Gilliamella sp. B14384G12
RISB3014 Apis mellifera 98.87% 0.56%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella apicola_N
GISB3202 Gilliamella sp. B14384G13
RISB3014 Apis mellifera 98.87% 0.56%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella apis_A
GISB3203 Gilliamella sp. B14384G15
RISB3014 Apis mellifera 98.87% 0.56%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella apicola_N
GISB3204 Gilliamella sp. B14384G7
RISB3014 Apis mellifera 98.87% 0.56%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella apis_A
GISB3205 Gilliamella sp. B14384H2
RISB3014 Apis mellifera 98.87% 0.56%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella apis_A