Insect Symbiont Genomes

A comprehensive collection of insect symbiont genomes from both metagenome-assembled genomes (MAGs), literature records and public databases. Our database currently contains 3648 insect symbionts genomes, providing valuable resources for understanding the genomic features and evolution of insect symbionts.

3895 Total Genomes

Genome Sources

Distribution of genome sources

Genome Quality

Distribution of genome quality metrics

Note: The quality score (QS) defined as 'Completeness − 5 × Contamination' estimated with CheckM

Genome Catalog

3895 records

Catalog of insect symbiont genomes and related information.

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Source ID Host Completeness Contamination GTDB Classification Actions
GISB3156 Bartonella sp. W8167
RISB3014 Apis mellifera 100.00% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A apis
GISB3157 Bifidobacterium apousia
RISB3014 Apis mellifera 97.64% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium apousia
GISB3158 Bifidobacterium apousia
RISB3014 Apis mellifera 97.64% 1.78%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium apousia
GISB3159 Bifidobacterium asteroides
RISB3014 Apis mellifera 97.64% 1.78%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium asteroides
GISB3160 Bifidobacterium asteroides
RISB3014 Apis mellifera 97.64% 1.21%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium asteroides
GISB3161 Bifidobacterium asteroides
RISB3014 Apis mellifera 97.43% 1.78%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium asteroides
GISB3162 Bifidobacterium choladohabitans
RISB3014 Apis mellifera 97.18% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
GISB3163 Bifidobacterium choladohabitans
RISB3014 Apis mellifera 97.18% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
GISB3164 Bifidobacterium choladohabitans
RISB3014 Apis mellifera 97.18% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
GISB3165 Bifidobacterium choladohabitans
RISB3014 Apis mellifera 96.73% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
GISB3166 Bifidobacterium choladohabitans
RISB3014 Apis mellifera 97.18% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium mellis
GISB3167 Bifidobacterium polysaccharolyticum
RISB3014 Apis mellifera 97.12% 1.21%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium polysaccharolyticum
GISB3168 Bifidobacterium polysaccharolyticum
RISB3014 Apis mellifera 97.18% 1.21%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium polysaccharolyticum
GISB3169 Bifidobacterium polysaccharolyticum
RISB3014 Apis mellifera 97.12% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium polysaccharolyticum
GISB3170 Bifidobacterium sp. M0307
RISB3014 Apis mellifera 96.31% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium indicum
GISB3171 Bifidobacterium sp. M0353
RISB3014 Apis mellifera 97.18% 1.80%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
GISB3172 Bifidobacterium sp. M0399
RISB3014 Apis mellifera 97.12% 1.21%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium polysaccharolyticum
GISB3173 Bifidobacterium sp. M0404
RISB3014 Apis mellifera 97.12% 1.67%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium polysaccharolyticum
GISB3174 Bifidobacterium sp. W8103
RISB3014 Apis mellifera 97.18% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
GISB3175 Bifidobacterium sp. W8104
RISB3014 Apis mellifera 96.73% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
GISB3176 Bifidobacterium sp. W8105
RISB3014 Apis mellifera 97.18% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
GISB3177 Bifidobacterium sp. W8107
RISB3014 Apis mellifera 97.18% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
GISB3178 Bifidobacterium sp. W8108
RISB3014 Apis mellifera 96.31% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium indicum
GISB3179 Bifidobacterium sp. W8110
RISB3014 Apis mellifera 97.64% 1.78%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium asteroides
GISB3180 Bifidobacterium sp. W8112
RISB3014 Apis mellifera 97.64% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium apousia