Insect Symbiont Genomes

A comprehensive collection of insect symbiont genomes from both metagenome-assembled genomes (MAGs), literature records and public databases. Our database currently contains 3648 insect symbionts genomes, providing valuable resources for understanding the genomic features and evolution of insect symbionts.

3895 Total Genomes

Genome Sources

Distribution of genome sources

Genome Quality

Distribution of genome quality metrics

Note: The quality score (QS) defined as 'Completeness − 5 × Contamination' estimated with CheckM

Genome Catalog

3895 records

Catalog of insect symbiont genomes and related information.

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Source ID Host Completeness Contamination GTDB Classification Actions
GISB2436 Gluconobacter cerinus strain Dm-75
38307.31 Drosophila melanogaster 99.50% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Gluconobacter_A;s__Gluconobacter_A cerinus
GISB2437 Gluconobacter cerinus strain Dm-77
38307.32 Drosophila melanogaster 99.50% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Gluconobacter_A;s__Gluconobacter_A cerinus
GISB2438 Gluconobacter cerinus strain Dm-3
38307.33 Drosophila melanogaster 99.50% 1.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Gluconobacter_A;s__Gluconobacter_A oxydans_A
GISB2439 Gluconobacter cerinus strain Dm-76
38307.34 Drosophila melanogaster 99.50% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Gluconobacter_A;s__Gluconobacter_A cerinus
GISB2440 Gluconobacter cerinus strain Dm-69
38307.35 Drosophila melanogaster 99.50% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Gluconobacter_A;s__Gluconobacter_A cerinus
GISB2441 Gluconobacter cerinus strain Dm-79
38307.36 Drosophila melanogaster 99.50% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Gluconobacter_A;s__Gluconobacter_A cerinus
GISB2442 Gluconobacter cerinus strain Dm-13
38307.38 Drosophila melanogaster 100.00% 28.45%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Gluconobacter_A;s__Gluconobacter_A cerinus
GISB2443 Chromobacterium haemolyticum UGAL515B_03
394935.51 Aedes aegypti 99.15% 2.35%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium;s__Chromobacterium haemolyticum
GISB2444 Stenotrophomonas maltophilia strain As1
40324.267 Anopheles stephensi 93.65% 0.34%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas sp002192255
GISB2445 Stenotrophomonas maltophilia strain As1
40324.66 Anopheles stephensi 93.65% 0.34%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas sp002192255
GISB2446 Asaia sp. SF2.1
406101.3 Anopheles stephensi 93.86% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Asaia;s__Asaia bogorensis
GISB2447 Bifidobacterium sp. MRS3-bin.3
41200.21 Apis mellifera 73.36% 5.87%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium sp000499285
GISB2448 Bifidobacterium sp. GUT-bin.2
41200.211 Apis mellifera 62.96% 3.33%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__
GISB2449 Bifidobacterium sp. BHI2-bin.8
41200.212 Apis mellifera 81.20% 7.51%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium sp000499285
GISB2450 Acetobacter pasteurianus strain AD
438.17 Drosophila melanogaster 100.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter pasteurianus
GISB2451 Bacillus thuringiensis serovar kyushuensis strain BGSC 4U1
44161.3 Bombyx mori 99.27% 0.38%
d__Bacteria;p__Bacillota;c__Bacilli;o__Bacillales;f__Bacillaceae_G;g__Bacillus_A;s__Bacillus_A thuringiensis
GISB2452 Bacillus thuringiensis serovar kyushuensis strain BGSC 4U1
44161.4 Culicidae 99.34% 0.11%
d__Bacteria;p__Bacillota;c__Bacilli;o__Bacillales;f__Bacillaceae_G;g__Bacillus_A;s__Bacillus_A toyonensis
GISB2453 Lysinibacillus sphaericus C3-41
444177.22 Anopheles gambiae 96.69% 0.99%
d__Bacteria;p__Bacillota;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Lysinibacillus;s__Lysinibacillus sphaericus_A
GISB2454 Paenibacillus apiarius NRS-1439
46240.17 Apis mellifera 99.18% 0.00%
d__Bacteria;p__Bacillota;c__Bacilli;o__Paenibacillales;f__Paenibacillaceae;g__Paenibacillus_B;s__Paenibacillus_B apiarius
GISB2455 Paenibacillus apiarius strain NRRL B-23460
46240.5 Apis mellifera 99.18% 0.00%
d__Bacteria;p__Bacillota;c__Bacilli;o__Paenibacillales;f__Paenibacillaceae;g__Paenibacillus_B;s__Paenibacillus_B apiarius
GISB2456 Bartonella sp. GUT-bin.6
46358.12 Apis mellifera 94.33% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A sp946478665
GISB2457 Acinetobacter baumannii MRS2-bin.13
470.18922 Apis mellifera 86.79% 3.68%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter baumannii
GISB2458 Acinetobacter baumannii BHI2-bin.4
470.18923 Apis mellifera 100.00% 0.18%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter baumannii
GISB2459 Acinetobacter baumannii BHI1-bin.3
470.18924 Apis mellifera 100.00% 0.18%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter baumannii
GISB2460 Serratia fonticola strain AeS1
47917.16 Aedes albopictus 99.94% 0.06%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Serratia_A;s__Serratia_A fonticola_B