Insect Symbiont Genomes

A comprehensive collection of insect symbiont genomes from both metagenome-assembled genomes (MAGs), literature records and public databases. Our database currently contains 3648 insect symbionts genomes, providing valuable resources for understanding the genomic features and evolution of insect symbionts.

3895 Total Genomes

Genome Sources

Distribution of genome sources

Genome Quality

Distribution of genome quality metrics

Note: The quality score (QS) defined as 'Completeness − 5 × Contamination' estimated with CheckM

Genome Catalog

3895 records

Catalog of insect symbiont genomes and related information.

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All Metagenome MAGs Literature Record Public Database
Source ID Host Completeness Contamination GTDB Classification Actions
GISB2261 Bifidobacterium sp. W8107
2751004.3 Apis mellifera 97.18% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
GISB2262 Bifidobacterium sp. W8116
2751005.3 Apis mellifera 97.18% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium mellis
GISB2263 Bifidobacterium sp. M0353
2751006.3 Apis mellifera 97.18% 1.80%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
GISB2264 Bifidobacterium sp. W6238G3
2751007.3 Apis mellifera 97.12% 1.21%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium polysaccharolyticum
GISB2265 Bifidobacterium sp. M0399
2751008.3 Apis mellifera 97.12% 1.21%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium polysaccharolyticum
GISB2266 Gilliamella sp. W8128
2751010.3 Apis mellifera 98.87% 0.56%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella apis
GISB2267 Gilliamella sp. M0364
2751011.3 Apis mellifera 98.87% 0.56%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella apis
GISB2268 Snodgrassella sp. M0351
2751012.3 Apis mellifera 99.57% 1.07%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi
GISB2269 Snodgrassella sp. W6238H11
2751013.3 Apis mellifera 99.57% 1.07%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi
GISB2270 Snodgrassella sp. W6238H14
2751014.3 Apis mellifera 99.57% 1.07%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi
GISB2271 Bartonella sp. M0280
2751015.3 Apis mellifera 100.00% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A apihabitans
GISB2272 Bartonella sp. M0283
2751016.3 Apis mellifera 100.00% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A sp016100455
GISB2273 Bifidobacterium sp. M0307
2751017.3 Apis mellifera 96.31% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium indicum
GISB2274 Snodgrassella sp. W8158
2751018.3 Apis mellifera 99.57% 1.50%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi
GISB2275 Bartonella sp. W8099
2751019.3 Apis mellifera 100.00% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A apis
GISB2276 Bartonella sp. W8151
2751020.3 Apis mellifera 100.00% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A apis
GISB2277 Bartonella sp. W8152
2751021.3 Apis mellifera 100.00% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A apis
GISB2278 Bartonella sp. W8167
2751022.3 Apis mellifera 100.00% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A apis
GISB2279 Commensalibacter sp. W8163
2751023.3 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB2280 Lactobacillus sp. W8092
2751024.3 Apis mellifera 98.95% 0.00%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Bombilactobacillus;s__Bombilactobacillus mellifer
GISB2281 Lactobacillus sp. W8172
2751025.3 Apis mellifera 97.40% 0.76%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus apis_A
GISB2282 Lactobacillus sp. M0390
2751026.3 Apis mellifera 97.40% 0.76%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus apis
GISB2283 Lactobacillus sp. W8171
2751027.3 Apis mellifera 97.40% 0.65%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus melliventris
GISB2284 Lactobacillus sp. M0392
2751028.3 Apis mellifera 97.40% 0.65%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus melliventris
GISB2285 Lactobacillus sp. M0393
2751029.3 Apis mellifera 97.40% 0.65%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus melliventris
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