Insect Symbiont Genomes

A comprehensive collection of insect symbiont genomes from both metagenome-assembled genomes (MAGs), literature records and public databases. Our database currently contains 3648 insect symbionts genomes, providing valuable resources for understanding the genomic features and evolution of insect symbionts.

3895 Total Genomes

Genome Sources

Distribution of genome sources

Genome Quality

Distribution of genome quality metrics

Note: The quality score (QS) defined as 'Completeness − 5 × Contamination' estimated with CheckM

Genome Catalog

3895 records

Catalog of insect symbiont genomes and related information.

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All Metagenome MAGs Literature Record Public Database
Source ID Host Completeness Contamination GTDB Classification Actions
GISB2236 Bifidobacterium sp. M0404
2750977.3 Apis mellifera 97.12% 1.67%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium polysaccharolyticum
GISB2237 Commensalibacter sp. M0355
2750978.3 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB2238 Commensalibacter sp. M0357
2750979.3 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB2239 Commensalibacter sp. M0402
2750980.3 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB2240 Commensalibacter sp. W6292M3
2750981.3 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
GISB2241 Gilliamella sp. W8136
2750982.3 Apis mellifera 98.87% 0.56%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella apicola_N
GISB2242 Lactobacillus sp. M0345
2750984.3 Apis mellifera 97.76% 1.25%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Apilactobacillus;s__Apilactobacillus waqarii
GISB2243 Snodgrassella sp. W8135
2750985.3 Apis mellifera 99.57% 0.85%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi
GISB2244 Snodgrassella sp. W8134
2750986.3 Apis mellifera 99.57% 0.85%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi
GISB2245 Bifidobacterium sp. W8113
2750987.3 Apis mellifera 97.18% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
GISB2246 Bifidobacterium sp. W8114
2750988.3 Apis mellifera 97.64% 1.21%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium asteroides
GISB2247 Bifidobacterium sp. B14448H7
2750989.3 Apis mellifera 97.18% 1.21%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium polysaccharolyticum
GISB2248 Gilliamella sp. W8145
2750990.3 Apis mellifera 98.87% 0.56%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella apis_A
GISB2249 Gilliamella sp. W8129
2750991.3 Apis mellifera 98.87% 0.56%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella apis
GISB2250 Gilliamella sp. W8123
2750992.3 Apis mellifera 98.87% 0.56%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella apis
GISB2251 Snodgrassella sp. W8124
2750993.3 Apis mellifera 99.57% 0.85%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi
GISB2252 Snodgrassella sp. W8132
2750994.3 Apis mellifera 99.57% 1.07%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi
GISB2253 Bartonella sp. W8125
2750995.3 Apis mellifera 100.00% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A choladocola
GISB2254 Bifidobacterium sp. W8115
2750997.3 Apis mellifera 97.64% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium apousia
GISB2255 Bifidobacterium sp. W8120
2750998.3 Apis mellifera 97.64% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium apousia
GISB2256 Bifidobacterium sp. W8101
2750999.3 Apis mellifera 97.18% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
GISB2257 Bifidobacterium sp. W8103
2751000.3 Apis mellifera 97.18% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
GISB2258 Bifidobacterium sp. W8104
2751001.3 Apis mellifera 96.73% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
GISB2259 Bifidobacterium sp. W8105
2751002.3 Apis mellifera 97.18% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
GISB2260 Bifidobacterium sp. W8106
2751003.3 Apis mellifera 96.73% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choladohabitans
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