Insect Symbiont Genomes

A comprehensive collection of insect symbiont genomes from both metagenome-assembled genomes (MAGs), literature records and public databases. Our database currently contains 3648 insect symbionts genomes, providing valuable resources for understanding the genomic features and evolution of insect symbionts.

3895 Total Genomes

Genome Sources

Distribution of genome sources

Genome Quality

Distribution of genome quality metrics

Note: The quality score (QS) defined as 'Completeness − 5 × Contamination' estimated with CheckM

Genome Catalog

3895 records

Catalog of insect symbiont genomes and related information.

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All Metagenome MAGs Literature Record Public Database
Source ID Host Completeness Contamination GTDB Classification Actions
GISB1461 Bifidobacterium asteroides strain ESL0200
1684.14 Apis mellifera 97.12% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium asteroides_G
GISB1462 Bifidobacterium asteroides strain ESL0198
1684.15 Apis mellifera 97.12% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium polysaccharolyticum
GISB1463 Bifidobacterium asteroides strain ESL0199
1684.16 Apis mellifera 97.12% 1.02%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium asteroides_F
GISB1464 Bifidobacterium asteroides strain ESL0170
1684.17 Apis mellifera 97.64% 1.33%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium asteroides
GISB1465 Bifidobacterium asteroides strain W8111
1684.24 Apis mellifera 97.12% 1.67%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium polysaccharolyticum
GISB1466 Bifidobacterium asteroides strain W8102
1684.25 Apis mellifera 97.64% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium apousia
GISB1467 Bifidobacterium asteroides strain VRA_9sq_n
1684.26 Apis mellifera 97.18% 0.98%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium asteroides_H
GISB1468 Bifidobacterium asteroides strain wkB204
1684.3 Apis mellifera 96.21% 3.58%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium polysaccharolyticum
GISB1469 Bifidobacterium asteroides strain Bin2
1684.4 Apis mellifera 97.03% 0.87%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium asteroides_J
GISB1470 Bifidobacterium asteroides strain Bin7
1684.5 Apis mellifera 97.18% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium mellis
GISB1471 Bifidobacterium asteroides strain Hma3
1684.6 Apis mellifera 97.12% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium polysaccharolyticum
GISB1472 Bartonella apis MRS2-bin.4
1686310.32 Apis mellifera 100.00% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A apis
GISB1473 Bartonella apis MRS1-bin.1
1686310.33 Apis mellifera 99.57% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A apis
GISB1474 Bartonella apis GUT-bin.12
1686310.34 Apis mellifera 99.78% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A apis
GISB1475 Bartonella apis strain PEB0150
1686310.4 Apis mellifera 100.00% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A apis
GISB1476 Bartonella apis strain PEB0122
1686310.5 Apis mellifera 100.00% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A apis
GISB1477 Bartonella apis strain PEB0149
1686310.6 Apis mellifera 100.00% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A apis
GISB1478 Bartonella apis strain BBC0178
1686310.7 Apis mellifera 100.00% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A apihabitans
GISB1479 Bartonella apis strain BBC0244
1686310.8 Apis mellifera 100.00% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A apihabitans
GISB1480 Bartonella apis strain BBC0122
1686310.9 Apis mellifera 100.00% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A choladocola
GISB1481 Bifidobacterium coryneforme strain LMG 18911
1687.3 Apis mellifera 95.71% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium indicum
GISB1482 Bifidobacterium coryneforme strain Bma6
1687.6 Apis mellifera 95.86% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium indicum
GISB1483 Bifidobacterium indicum strain ESL0197
1691.3 Apis mellifera 96.31% 0.76%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium indicum
GISB1484 Acinetobacter sp. NRRL B-65365
1785092.3 Diaphorina citri 100.00% 0.55%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter vivianii
GISB1485 Bombella apis MRS3-bin.2
1785988.1 Apis mellifera 92.67% 0.51%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Bombella;s__Bombella apis
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