Insect Symbiont Genomes

A comprehensive collection of insect symbiont genomes from both metagenome-assembled genomes (MAGs), literature records and public databases. Our database currently contains 3648 insect symbionts genomes, providing valuable resources for understanding the genomic features and evolution of insect symbionts.

3895 Total Genomes

Genome Sources

Distribution of genome sources

Genome Quality

Distribution of genome quality metrics

Note: The quality score (QS) defined as 'Completeness − 5 × Contamination' estimated with CheckM

Genome Catalog

3895 records

Catalog of insect symbiont genomes and related information.

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All Metagenome MAGs Literature Record Public Database
Source ID Host Completeness Contamination GTDB Classification Actions
SRR7986805.man.bin.6 Frischella perrara
SRR7986805 Apis mellifera 85.48% 3.25%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Frischella;s__Frischella perrara
SRR7986805.man.bin.9 Lactobacillus apis
SRR7986805 Apis mellifera 71.91% 4.54%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus apis
SRR7986806.man.bin.1 Gilliamella apicola_N
SRR7986806 Apis mellifera 90.68% 3.11%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella apicola_N
SRR7986806.man.bin.11 Frischella perrara
SRR7986806 Apis mellifera 45.00% 0.00%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Frischella;s__Frischella perrara
SRR7986807.man.bin.1 Bombilactobacillus mellis
SRR7986807 Apis mellifera 91.17% 4.13%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Bombilactobacillus;s__Bombilactobacillus mellis
SRR7986807.man.bin.10 Lactobacillus apis
SRR7986807 Apis mellifera 84.81% 4.71%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus apis
SRR7986807.man.bin.17 Bartonella_A sp946478235
SRR7986807 Apis mellifera 55.04% 1.30%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A sp946478235
SRR7986807.man.bin.9 Commensalibacter melissae
SRR7986807 Apis mellifera 96.52% 0.66%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
SRR7986808.man.bin.13 Bartonella_A sp945285915
SRR7986808 Apis mellifera 47.41% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A sp945285915
SRR7986808.man.bin.25 Lactobacillus helsingborgensis
SRR7986808 Apis mellifera 89.64% 7.26%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus helsingborgensis
SRR7986808.man.bin.3 Bombilactobacillus mellis
SRR7986808 Apis mellifera 75.10% 5.24%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Bombilactobacillus;s__Bombilactobacillus mellis
SRR7986808.man.bin.5 Commensalibacter melissae
SRR7986808 Apis mellifera 96.79% 0.75%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
SRR7986808.man.bin.6 Hafnia alvei
SRR7986808 Apis mellifera 83.35% 0.64%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Hafnia;s__Hafnia alvei
SRR7986808.man.bin.8 Bartonella_A sp946479275
SRR7986808 Apis mellifera 75.90% 1.88%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A sp946479275
SRR7986810.man.bin.2 Snodgrassella alvi
SRR7986810 Apis mellifera 69.42% 2.14%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi
SRR7986811.man.bin.11 Entomomonas sp945283395
SRR7986811 Apis mellifera 79.43% 0.82%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Entomomonas;s__Entomomonas sp945283395
SRR7986811.man.bin.14 Apibacter sp945280365
SRR7986811 Apis mellifera 98.92% 2.15%
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Apibacter;s__Apibacter sp945280365
SRR7986811.man.bin.5 Commensalibacter sp945266285
SRR7986811 Apis mellifera 88.66% 1.41%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter sp945266285
SRR7986811.man.bin.7 Commensalibacter melissae
SRR7986811 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
SRR7986811.man.bin.8 Cedecea davisae
SRR7986811 Apis mellifera 99.29% 0.00%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Cedecea;s__Cedecea davisae
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