Insect Symbiont Genomes

A comprehensive collection of insect symbiont genomes from both metagenome-assembled genomes (MAGs), literature records and public databases. Our database currently contains 3648 insect symbionts genomes, providing valuable resources for understanding the genomic features and evolution of insect symbionts.

3895 Total Genomes

Genome Sources

Distribution of genome sources

Genome Quality

Distribution of genome quality metrics

Note: The quality score (QS) defined as 'Completeness − 5 × Contamination' estimated with CheckM

Genome Catalog

3895 records

Catalog of insect symbiont genomes and related information.

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All Metagenome MAGs Literature Record Public Database
Source ID Host Completeness Contamination GTDB Classification Actions
SRR7986789.man.bin.12 Snodgrassella alvi
SRR7986789 Apis mellifera 94.75% 1.54%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi
SRR7986790.man.bin.2 Frischella perrara
SRR7986790 Apis mellifera 96.05% 3.35%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Frischella;s__Frischella perrara
SRR7986790.man.bin.7 Commensalibacter melissae
SRR7986790 Apis mellifera 99.00% 0.50%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
SRR7986790.man.bin.8 Snodgrassella alvi
SRR7986790 Apis mellifera 78.24% 0.00%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi
SRR7986791.man.bin.3 Bombilactobacillus mellis
SRR7986791 Apis mellifera 44.76% 0.00%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Bombilactobacillus;s__Bombilactobacillus mellis
SRR7986791.man.bin.7 Snodgrassella alvi
SRR7986791 Apis mellifera 84.20% 2.13%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi
SRR7986792.man.bin.19 Commensalibacter melissae
SRR7986792 Apis mellifera 92.29% 0.85%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
SRR7986792.man.bin.2 Bombilactobacillus mellis
SRR7986792 Apis mellifera 65.43% 0.79%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Bombilactobacillus;s__Bombilactobacillus mellis
SRR7986792.man.bin.7 Apibacter sp945280365
SRR7986792 Apis mellifera 71.82% 3.32%
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Apibacter;s__Apibacter sp945280365
SRR7986792.man.bin.9 Bifidobacterium polysaccharolyticum
SRR7986792 Apis mellifera 75.65% 1.55%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium polysaccharolyticum
SRR7986793.man.bin.1 Commensalibacter melissae
SRR7986793 Apis mellifera 95.75% 0.87%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
SRR7986793.man.bin.10 Lactobacillus apis
SRR7986793 Apis mellifera 61.72% 2.88%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus apis
SRR7986793.man.bin.15 Commensalibacter sp946699565
SRR7986793 Apis mellifera 98.07% 2.33%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter sp946699565
SRR7986793.man.bin.5 Snodgrassella alvi
SRR7986793 Apis mellifera 72.41% 0.00%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi
SRR7986794.man.bin.2 Gilliamella apicola_N
SRR7986794 Apis mellifera 88.87% 1.13%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella apicola_N
SRR7986795.man.bin.8 Snodgrassella alvi
SRR7986795 Apis mellifera 85.73% 2.35%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi
SRR7986796.man.bin.15 Bartonella_A apis
SRR7986796 Apis mellifera 49.06% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A apis
SRR7986796.man.bin.16 Serratia_A fonticola
SRR7986796 Apis mellifera 55.02% 0.20%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Serratia_A;s__Serratia_A fonticola
SRR7986796.man.bin.3 Commensalibacter melissae
SRR7986796 Apis mellifera 49.79% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
SRR7986796.man.bin.5 Snodgrassella alvi
SRR7986796 Apis mellifera 53.45% 1.72%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi
SRR7986796.man.bin.7 Bartonella_A sp945285915
SRR7986796 Apis mellifera 80.84% 3.70%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella_A;s__Bartonella_A sp945285915
SRR7986797.man.bin.3 Gilliamella apicola_N
SRR7986797 Apis mellifera 93.33% 4.24%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella apicola_N
SRR7986798.man.bin.11 Gilliamella apicola_N
SRR7986798 Apis mellifera 89.92% 6.21%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella apicola_N
SRR7986798.man.bin.5 Commensalibacter melissae
SRR7986798 Apis mellifera 94.27% 0.57%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter melissae
SRR7986798.man.bin.7 Snodgrassella alvi
SRR7986798 Apis mellifera 63.74% 0.57%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi
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