Insect Symbiont Genomes

A comprehensive collection of insect symbiont genomes from both metagenome-assembled genomes (MAGs), literature records and public databases. Our database currently contains 3648 insect symbionts genomes, providing valuable resources for understanding the genomic features and evolution of insect symbionts.

3895 Total Genomes

Genome Sources

Distribution of genome sources

Genome Quality

Distribution of genome quality metrics

Note: The quality score (QS) defined as 'Completeness − 5 × Contamination' estimated with CheckM

Genome Catalog

3895 records

Catalog of insect symbiont genomes and related information.

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Source ID Host Completeness Contamination GTDB Classification Actions
SRR24358075 Aedes koreicus larvae 96.95% 0.72%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JALORV01;s__
SRR24358075 Aedes koreicus larvae 89.95% 0.00%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Thorsellia;s__
SRR24540813.bin.4 Corynebacterium sp012837295
SRR24540813 Musca domestica 93.75% 0.00%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium;s__Corynebacterium sp012837295
SRR24540813 Musca domestica 91.85% 1.24%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Vagococcaceae;g__Vagococcus;s__
SRR24540813 Musca domestica 81.87% 1.38%
d__Bacteria;p__Bacillota;c__Bacilli;o__Culicoidibacterales;f__BHER01;g__BHER01;s__
SRR24540814 Musca domestica 98.36% 0.27%
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Dysgonomonadaceae;g__Dysgonomonas;s__
SRR24540814.bin.3 Corynebacterium sp012837295
SRR24540814 Musca domestica 92.06% 1.69%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium;s__Corynebacterium sp012837295
SRR24540842.bin.13 Empedobacter stercoris
SRR24540842 Musca domestica 92.97% 3.63%
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Empedobacter;s__Empedobacter stercoris
SRR24540842.bin.14 Acinetobacter faecalis
SRR24540842 Musca domestica 68.10% 0.00%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter faecalis
SRR24540842.bin.15 Psychrobacter pasteurii
SRR24540842 Musca domestica 87.76% 2.31%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Psychrobacter;s__Psychrobacter pasteurii
SRR24540842.bin.2 Ignatzschineria larvae
SRR24540842 Musca domestica 94.83% 1.98%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Cardiobacteriales;f__Wohlfahrtiimonadaceae;g__Ignatzschineria;s__Ignatzschineria larvae
SRR24540842.bin.3 Unclassified Bacteria
SRR24540842 Musca domestica 95.42% 0.95%
Unclassified Bacteria
SRR24540842.bin.4 Thiopseudomonas caeni
SRR24540842 Musca domestica 53.69% 0.58%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Thiopseudomonas;s__Thiopseudomonas caeni
SRR24540842.bin.8 Kluyvera cryocrescens
SRR24540842 Musca domestica 95.56% 3.20%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Kluyvera;s__Kluyvera cryocrescens
SRR24540843.bin.10 Flavobacterium odoratimimum
SRR24540843 Musca domestica 93.36% 0.47%
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium odoratimimum
SRR24540843 Musca domestica 95.86% 1.68%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Cardiobacteriales;f__Wohlfahrtiimonadaceae;g__Wohlfahrtiimonas;s__
SRR24540843.bin.12 Kluyvera cryocrescens
SRR24540843 Musca domestica 93.56% 0.99%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Kluyvera;s__Kluyvera cryocrescens
SRR24540843.bin.13 Unclassified Bacteria
SRR24540843 Musca domestica 80.88% 1.29%
Unclassified Bacteria
SRR24540843.bin.15 Klebsiella ornithinolytica
SRR24540843 Musca domestica 90.12% 8.43%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Klebsiella;s__Klebsiella ornithinolytica
SRR24540843.bin.19 Ignatzschineria larvae
SRR24540843 Musca domestica 84.80% 1.17%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Cardiobacteriales;f__Wohlfahrtiimonadaceae;g__Ignatzschineria;s__Ignatzschineria larvae
SRR24540843.bin.20 Acinetobacter pseudolwoffii
SRR24540843 Musca domestica 80.31% 2.06%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter pseudolwoffii
SRR24540843.bin.4 Psychrobacter faecalis
SRR24540843 Musca domestica 86.96% 0.71%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Psychrobacter;s__Psychrobacter faecalis
SRR24540843 Musca domestica 92.16% 5.07%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__
SRR24540843.bin.7 Staphylococcus equorum
SRR24540843 Musca domestica 72.03% 3.29%
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus equorum
SRR24540843.bin.9 Vagococcus teuberi
SRR24540843 Musca domestica 62.86% 0.88%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Vagococcaceae;g__Vagococcus;s__Vagococcus teuberi