Insect Symbiont Genomes

A comprehensive collection of insect symbiont genomes from both metagenome-assembled genomes (MAGs), literature records and public databases. Our database currently contains 3648 insect symbionts genomes, providing valuable resources for understanding the genomic features and evolution of insect symbionts.

3895 Total Genomes

Genome Sources

Distribution of genome sources

Genome Quality

Distribution of genome quality metrics

Note: The quality score (QS) defined as 'Completeness − 5 × Contamination' estimated with CheckM

Genome Catalog

3895 records

Catalog of insect symbiont genomes and related information.

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All Metagenome MAGs Literature Record Public Database
Source ID Host Completeness Contamination GTDB Classification Actions
SRR23015432.bin.27 Bombella sp946476985
SRR23015432 Apis mellifera 86.59% 4.29%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Bombella;s__Bombella sp946476985
SRR23015432.bin.33 Apilactobacillus bombintestini
SRR23015432 Apis mellifera 68.39% 0.00%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Apilactobacillus;s__Apilactobacillus bombintestini
SRR23015432.bin.40 Fructobacillus fructosus
SRR23015432 Apis mellifera 47.12% 0.00%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Fructobacillus;s__Fructobacillus fructosus
SRR23015432.bin.41 Bombella saccharophila
SRR23015432 Apis mellifera 74.20% 0.95%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Bombella;s__Bombella saccharophila
SRR23015432.bin.9 Gilliamella sp945271295
SRR23015432 Apis mellifera 79.59% 0.56%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella sp945271295
SRR23015433.bin.1 Apilactobacillus waqarii
SRR23015433 Apis mellifera 71.40% 2.00%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Apilactobacillus;s__Apilactobacillus waqarii
SRR23015433.bin.14 Unclassified
SRR23015433 Apis mellifera 92.96% 2.36%
Unclassified
SRR23015433.bin.16 Unclassified Archaea
SRR23015433 Apis mellifera 71.55% 0.00%
Unclassified Archaea
SRR23015433.bin.17 Bombella sp946476985
SRR23015433 Apis mellifera 87.50% 1.16%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Bombella;s__Bombella sp946476985
SRR23015433.bin.5 Spiroplasma melliferum
SRR23015433 Apis mellifera 98.12% 0.73%
d__Bacteria;p__Bacillota_I;c__Bacilli_A;o__Mycoplasmatales;f__Mycoplasmataceae;g__Spiroplasma;s__Spiroplasma melliferum
SRR23015433.bin.9 Apilactobacillus bombintestini
SRR23015433 Apis mellifera 66.55% 1.72%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Apilactobacillus;s__Apilactobacillus bombintestini
SRR23015434.bin.14 Melissococcus plutonius
SRR23015434 Apis mellifera 91.21% 0.00%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Melissococcus;s__Melissococcus plutonius
SRR23015434.bin.21
SRR23015434 Apis mellifera 75.89% 1.66%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Melissococcus;s__
SRR23015434.bin.24 Gilliamella sp945271295
SRR23015434 Apis mellifera 43.97% 0.00%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Gilliamella;s__Gilliamella sp945271295
SRR23015434.bin.31 Arsenophonus apicola
SRR23015434 Apis mellifera 99.46% 0.00%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Arsenophonus;s__Arsenophonus apicola
SRR23015434.bin.32 Fructobacillus fructosus
SRR23015434 Apis mellifera 95.90% 0.79%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Fructobacillus;s__Fructobacillus fructosus
SRR23015434.bin.5 Bombella sp946476985
SRR23015434 Apis mellifera 56.21% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Bombella;s__Bombella sp946476985
SRR23015439.bin.15 Apilactobacillus apinorum
SRR23015439 Apis mellifera 94.70% 2.12%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Apilactobacillus;s__Apilactobacillus apinorum
SRR23015439.bin.24 Unclassified Archaea
SRR23015439 Apis mellifera 94.34% 1.17%
Unclassified Archaea
SRR23015439.bin.28 Apilactobacillus bombintestini
SRR23015439 Apis mellifera 75.89% 1.01%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Apilactobacillus;s__Apilactobacillus bombintestini
SRR23015439.bin.6 Fructobacillus fructosus
SRR23015439 Apis mellifera 97.73% 1.18%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Fructobacillus;s__Fructobacillus fructosus
SRR23015448.bin.1 Melissococcus plutonius
SRR23015448 Apis mellifera 42.20% 0.00%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Melissococcus;s__Melissococcus plutonius
SRR23015448.bin.11 Unclassified Bacteria
SRR23015448 Apis mellifera 87.46% 4.74%
Unclassified Bacteria
SRR23015448.bin.18 Unclassified Bacteria
SRR23015448 Apis mellifera 99.71% 0.00%
Unclassified Bacteria
SRR23015448.bin.2 Melissococcus plutonius
SRR23015448 Apis mellifera 51.72% 0.00%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Melissococcus;s__Melissococcus plutonius
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