Insect Symbiont Genomes

A comprehensive collection of insect symbiont genomes from both metagenome-assembled genomes (MAGs), literature records and public databases. Our database currently contains 3648 insect symbionts genomes, providing valuable resources for understanding the genomic features and evolution of insect symbionts.

3895 Total Genomes

Genome Sources

Distribution of genome sources

Genome Quality

Distribution of genome quality metrics

Note: The quality score (QS) defined as 'Completeness − 5 × Contamination' estimated with CheckM

Genome Catalog

3895 records

Catalog of insect symbiont genomes and related information.

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All Metagenome MAGs Literature Record Public Database
Source ID Host Completeness Contamination GTDB Classification Actions
SRR19201359.bin.7 Variovorax sp900115375
SRR19201359 Sinoxylon 94.00% 3.48%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Variovorax;s__Variovorax sp900115375
SRR19201365.bin.2 Wolbachia sp918342435
SRR19201365 Lyctus brunneus 97.65% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Wolbachia;s__Wolbachia sp918342435
SRR19201372.bin.1
SRR19201372 Bostrychoplites zickeli 83.04% 2.90%
d__Archaea;p__Asgardarchaeota;c__Wukongarchaeia;o__;f__;g__;s__
SRR19201374.bin.1 Cutibacterium acnes
SRR19201374 Amphicerus bicaudatus 99.67% 0.00%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium;s__Cutibacterium acnes
SRR19201374.bin.2 Escherichia coli
SRR19201374 Amphicerus bicaudatus 81.75% 0.05%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli
SRR19201379.bin.3 Shikimatogenerans bostrichidophilus_B
SRR19201379 Euderia squamosa 55.66% 0.00%
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales_B;f__Blattabacteriaceae;g__Shikimatogenerans;s__Shikimatogenerans bostrichidophilus_B
SRR19201380.bin.1 Spiroplasma_D ixodetis
SRR19201380 Rhyzopertha dominica 96.24% 1.50%
d__Bacteria;p__Bacillota_I;c__Bacilli_A;o__Mycoplasmatales;f__VBWQ01;g__Spiroplasma_D;s__Spiroplasma_D ixodetis
SRR19201382.bin.1 Bostrichicola ureolyticus
SRR19201382 Dinoderus porcellus 82.80% 0.00%
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales_B;f__Blattabacteriaceae;g__Bostrichicola;s__Bostrichicola ureolyticus
SRR19201388.bin.3 Lactiplantibacillus plantarum
SRR19201388 Trogoxylon 95.68% 2.78%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactiplantibacillus;s__Lactiplantibacillus plantarum
SRR19201388.bin.8 Wolbachia sp947250775
SRR19201388 Trogoxylon 98.08% 0.75%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Wolbachia;s__Wolbachia sp947250775
SRR19543158.bin.1 Leuconostoc pseudomesenteroides
SRR19543158 Anastrepha obliqua 71.48% 0.40%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc;s__Leuconostoc pseudomesenteroides
SRR19543162.bin.1 Acetobacter papayae
SRR19543162 Anastrepha obliqua 95.86% 8.21%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter papayae
SRR19543164.bin.2 Acetobacter okinawensis_A
SRR19543164 Anastrepha obliqua 53.45% 0.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter okinawensis_A
SRR19543164.bin.3 Acetobacter ghanensis
SRR19543164 Anastrepha obliqua 95.51% 2.34%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter ghanensis
SRR19543164.bin.5
SRR19543164 Anastrepha obliqua 91.24% 1.27%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__;s__
SRR19543166.bin.1 Unclassified Bacteria
SRR19543166 Anastrepha obliqua 70.17% 1.72%
Unclassified Bacteria
SRR19543166.bin.3 Leuconostoc pseudomesenteroides
SRR19543166 Anastrepha obliqua 73.40% 0.55%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Leuconostoc;s__Leuconostoc pseudomesenteroides
SRR19543166.bin.4 Tatumella ptyseos
SRR19543166 Anastrepha obliqua 94.80% 2.38%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Tatumella;s__Tatumella ptyseos
SRR19577180.bin.11 Unclassified
SRR19577180 Aedes albopictus 93.20% 0.11%
Unclassified
SRR19577180.bin.12 Wolbachia pipientis_B
SRR19577180 Aedes albopictus 94.76% 0.53%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Wolbachia;s__Wolbachia pipientis_B
SRR21047422.bin.1 Pseudomonas_E fluorescens_CB
SRR21047422 Hybomitra lurida 87.54% 0.05%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E fluorescens_CB
SRR22536326.bin.1 Rhodococcus erythropolis_D
SRR22536326 Iatrophobia brasiliensis 92.01% 0.00%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Rhodococcus;s__Rhodococcus erythropolis_D
SRR22536686.bin.1 Williamsia muralis
SRR22536686 Iatrophobia brasiliensis 99.43% 0.41%
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Williamsia;s__Williamsia muralis
SRR22536686.bin.2 Pseudomonas_E azotoformans
SRR22536686 Iatrophobia brasiliensis 99.93% 0.08%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E azotoformans
SRR23015428.bin.1 Apilactobacillus bombintestini
SRR23015428 Apis mellifera 80.28% 1.46%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Apilactobacillus;s__Apilactobacillus bombintestini
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