Amplicon

Our database features a diverse collection of 14,992 amplicon sequencing samples, representing various insect species from multiple geographical regions. Raw sequencing data were retrieved from NCBI, curated manually to ensure quality. Data preprocessing involved quality control and merging with Fastp, primer sequence trimming with Seqtk, and a standardized removal of 20 bp from the 5' ends of both forward and reverse reads. Taxonomic composition was analyzed using QIIME2 and Vsearch. Operational Taxonomic Units (OTUs) were classified with two workflows: QIIME2 utilized a pre-trained Greengenes classifier (gg_2022_10_backbone_full_length.nb.qza), while Vsearch employed the SINTAX algorithm with the Greengenes v13.5 reference database. Results were visualized using Krona for an interactive exploration of taxonomic distributions.

15035 Total Samples

Amplicon Types

Distribution of 16S and ITS sequences

Geographic Distribution

Sample distribution by continent

Amplicons

15035 records

Amplicon records associated with insect symbionts from public databases worldwide.

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All 16S Others
Run Assay Type Classification Host Area Env Info Collection Year
SRR18964167 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964168 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964169 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964170 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964171 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964172 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964173 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964174 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964175 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964176 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964177 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964178 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964179 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964180 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964181 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964182 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964183 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR18964184 AMPLICON 16S Galleria mellonella Russia - Europe microbial feature [ENVO:01000007] - animal-associated environment [ENVO:01001002] 2017
SRR1914365 AMPLICON 16S Helicoverpa armigera India - Asia 2014
SRR19147663 AMPLICON 16S Gromphadorhina portentosa Germany - Europe Insect-associated gut microbiome - Blaberidae foregut microbiome 2019
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