0.89 1287 1287 U 0 unclassified 99.11 143499 0 R 1 root 99.11 143499 1 R1 131567 cellular organisms 99.11 143498 192 D 2 Bacteria 94.44 136740 51 D1 1783272 Terrabacteria group 93.48 135340 130 P 1239 Bacillota 93.08 134771 13318 C 91061 Bacilli 55.35 80136 4104 O 1385 Bacillales 27.35 39606 548 F 186817 Bacillaceae 25.04 36253 846 G 1386 Bacillus 16.86 24405 817 G1 653685 Bacillus subtilis group 11.41 16515 10 G2 1938374 Bacillus amyloliquefaciens group 10.62 15373 15084 S 492670 Bacillus velezensis 0.20 289 289 S1 1385727 Bacillus velezensis NAU-B3 0.78 1131 1122 S 1390 Bacillus amyloliquefaciens 0.01 8 8 S1 1292358 Bacillus amyloliquefaciens KHG19 0.00 1 1 S1 1034836 Bacillus amyloliquefaciens XH7 0.00 1 1 S 659243 Bacillus siamensis 4.76 6894 6318 S 1423 Bacillus subtilis 0.29 421 367 S1 135461 Bacillus subtilis subsp. subtilis 0.04 52 52 S2 1302650 Bacillus subtilis subsp. subtilis str. BAB-1 0.00 2 2 S2 224308 Bacillus subtilis subsp. subtilis str. 168 0.11 155 155 S1 86029 Bacillus subtilis subsp. natto 0.05 77 77 S 1648923 Bacillus paralicheniformis 0.02 36 36 S 483913 Bacillus inaquosorum 0.02 30 30 S 1452 Bacillus atrophaeus 0.01 21 0 G2 653388 Bacillus mojavensis subgroup 0.01 21 21 S 260554 Bacillus halotolerans 0.01 14 14 S 1402 Bacillus licheniformis 0.00 1 1 S 96241 Bacillus spizizenii 2.81 4064 4064 S 561879 Bacillus safensis 2.52 3647 55 G1 86661 Bacillus cereus group 0.98 1416 1375 S 1396 Bacillus cereus 0.02 23 23 S1 1454382 Bacillus cereus D17 0.01 14 14 S1 1003239 Bacillus cereus C1L 0.00 4 4 S1 288681 Bacillus cereus E33L 0.89 1286 1226 S 1428 Bacillus thuringiensis 0.03 44 0 S1 29339 Bacillus thuringiensis serovar kurstaki 0.03 44 44 S2 1261129 Bacillus thuringiensis serovar kurstaki str. HD-1 0.01 12 12 S1 1217737 Bacillus thuringiensis HD-789 0.00 3 3 S1 412694 Bacillus thuringiensis str. Al Hakam 0.00 1 1 S1 1423143 Bacillus thuringiensis Bt18247 0.34 499 499 S 1392 Bacillus anthracis 0.19 281 281 S 64104 Bacillus pseudomycoides 0.04 54 54 S 2026186 Bacillus paranthracis 0.02 34 15 S 1405 Bacillus mycoides 0.01 19 19 S1 315730 Bacillus mycoides KBAB4 0.01 12 0 G2 2750818 unclassified Bacillus cereus group 0.01 12 12 S 1892404 Bacillus sp. ABP14 0.01 9 9 S 2026191 Bacillus luti 0.00 1 1 S 155322 Bacillus toyonensis 1.42 2057 0 G1 1792192 Bacillus altitudinis complex 1.42 2057 2057 S 293387 Bacillus altitudinis 0.74 1078 1 G1 185979 unclassified Bacillus (in: firmicutes) 0.28 406 406 S 2841656 Bacillus sp. ZHX3 0.24 351 351 S 467262 Bacillus sp. T3 0.10 142 142 S 666686 Bacillus sp. 1NLA3E 0.06 86 86 S 3077323 Bacillus sp. SI2 0.04 65 65 S 2709784 Bacillus sp. KH172YL63 0.01 19 19 S 2874284 Bacillus sp. CRB-7 0.00 4 4 S 1806216 Bacillus sp. RZ2MS9 0.00 2 2 S 2884834 Bacillus sp. CMF12 0.00 1 1 S 3129297 Bacillus sp. FJAT-52991 0.00 1 1 S 2789210 Bacillus sp. A1(2020) 0.11 154 154 S 1408 Bacillus pumilus 0.00 2 2 S 1983719 Bacillus shivajii 0.71 1021 1 G 2675230 Cytobacillus 0.38 557 557 S 665099 Cytobacillus oceanisediminis 0.31 456 456 S 1399 Cytobacillus firmus 0.00 7 7 S 3051614 Cytobacillus pseudoceanisediminis 0.35 503 31 G 2837504 Heyndrickxia 0.33 472 469 S 1398 Heyndrickxia coagulans 0.00 3 3 S1 345219 Heyndrickxia coagulans 36D1 0.32 463 1 G 2800373 Priestia 0.29 422 417 S 1404 Priestia megaterium 0.00 5 5 S1 1006007 Priestia megaterium WSH-002 0.03 40 40 S 412384 Priestia aryabhattai 0.13 190 34 G 400634 Lysinibacillus 0.04 57 0 G1 2636778 unclassified Lysinibacillus 0.04 57 57 S 2954544 Lysinibacillus sp. FSL W7-1291 0.03 50 42 S 1421 Lysinibacillus sphaericus 0.01 8 8 S1 444177 Lysinibacillus sphaericus C3-41 0.02 26 26 S 2086577 Lysinibacillus timonensis 0.01 21 21 S 2590012 Lysinibacillus agricola 0.00 2 2 S 28031 Lysinibacillus fusiformis 0.09 131 0 G 2675229 Peribacillus 0.08 116 116 S 264697 Peribacillus muralis 0.01 14 14 S 228899 Peribacillus asahii 0.00 1 1 S 1407 Peribacillus psychrosaccharolyticus 0.07 97 0 G 175304 Lentibacillus 0.07 97 0 G1 2614679 unclassified Lentibacillus 0.07 97 97 S 2518176 Lentibacillus sp. CBA3610 0.04 54 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.04 54 0 S 86665 Halalkalibacterium halodurans 0.04 54 54 S1 272558 Halalkalibacterium halodurans C-125 0.04 52 45 G 182709 Oceanobacillus 0.00 7 7 S 2052660 Oceanobacillus zhaokaii 0.03 50 0 G 2685905 Salicibibacter 0.03 50 50 S 2743001 Salicibibacter cibi 0.03 42 11 G 129337 Geobacillus 0.01 15 0 S 33940 Geobacillus thermodenitrificans 0.01 15 15 S1 420246 Geobacillus thermodenitrificans NG80-2 0.00 6 0 G1 1505648 Geobacillus thermoleovorans group 0.00 6 6 S 33941 Geobacillus thermoleovorans 0.00 6 0 G1 2642459 unclassified Geobacillus 0.00 5 5 S 1233873 Geobacillus sp. GHH01 0.00 1 1 S 1963025 Geobacillus sp. 46C-IIa 0.00 2 2 S 860353 Geobacillus proteiniphilus 0.00 2 2 S 1921421 Geobacillus genomosp. 3 0.02 36 0 G 2005375 Alkalicoccus 0.02 36 36 S 1667239 Alkalicoccus halolimnae 0.02 24 0 G 2837508 Rossellomorea 0.02 24 24 S 189381 Rossellomorea marisflavi 0.01 20 1 G 2675233 Metabacillus 0.01 17 17 S 1535204 Metabacillus endolithicus 0.00 1 1 S 2567941 Metabacillus sediminilitoris 0.00 1 1 G1 2675274 unclassified Metabacillus 0.01 19 0 G 45667 Halobacillus 0.01 17 17 S 45668 Halobacillus litoralis 0.00 2 2 S 2932258 Halobacillus shinanisalinarum 0.01 18 0 G 1494427 Tepidibacillus 0.01 18 18 S 3131995 Tepidibacillus marianensis 0.01 13 0 G 379065 Caldalkalibacillus 0.01 13 0 S 296745 Caldalkalibacillus thermarum 0.01 13 13 S1 986075 Caldalkalibacillus thermarum TA2.A1 0.01 12 1 G 459532 Terribacillus 0.00 7 0 G1 2636508 unclassified Terribacillus 0.00 4 4 S 2921447 Terribacillus sp. FSL K6-0262 0.00 3 3 S 2850441 Terribacillus sp. DMT04 0.00 4 4 S 361277 Terribacillus saccharophilus 0.01 12 0 G 150247 Anoxybacillus 0.01 8 8 G1 2639704 unclassified Anoxybacillus 0.00 2 0 S 33934 Anoxybacillus flavithermus 0.00 2 2 S1 491915 Anoxybacillus flavithermus WK1 0.00 1 1 S 198467 Anoxybacillus gonensis 0.00 1 1 S 294699 Anoxybacillus amylolyticus 0.01 10 0 G 2675231 Mesobacillus 0.01 9 9 S 285983 Mesobacillus subterraneus 0.00 1 1 S 279826 Mesobacillus foraminis 0.01 9 0 G 2785518 Radiobacillus 0.01 9 9 S 2594883 Radiobacillus deserti 0.01 8 0 G 2837506 Niallia 0.01 8 8 S 1397 Niallia circulans 0.00 5 2 G 351195 Salimicrobium 0.00 3 0 G1 2619739 unclassified Salimicrobium 0.00 3 3 S 3095364 Salimicrobium sp. PL1-032A 0.00 5 5 G 2893057 Shouchella 0.00 4 0 G 2837510 Siminovitchia 0.00 4 4 S 254758 Siminovitchia fortis 0.00 1 0 G 2675232 Neobacillus 0.00 1 0 G1 2675272 unclassified Neobacillus 0.00 1 1 S 3070677 Neobacillus sp. PS3-12 0.00 1 0 G 1433999 Domibacillus 0.00 1 0 G1 2632383 unclassified Domibacillus 0.00 1 1 S 3077789 Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016 0.00 1 0 G 484508 Ornithinibacillus 0.00 1 0 G1 2620869 unclassified Ornithinibacillus 0.00 1 1 S 2921616 Ornithinibacillus sp. FSL M8-0202 0.00 1 0 G 482460 Sediminibacillus 0.00 1 1 S 2729421 Sediminibacillus dalangtanensis 0.00 1 0 G 2804231 Lederbergia 0.00 1 1 S 1467 Lederbergia lenta 0.00 1 0 G 3033930 Fervidibacillus 0.00 1 1 S 2980026 Fervidibacillus albus 0.00 1 0 G 84406 Virgibacillus 0.00 1 1 S 447199 Virgibacillus salarius 21.23 30740 15 F 90964 Staphylococcaceae 20.70 29971 208 G 1279 Staphylococcus 19.45 28158 28101 S 1280 Staphylococcus aureus 0.04 54 54 S1 1229492 Staphylococcus aureus 08BA02176 0.00 2 2 S1 548470 Staphylococcus aureus subsp. aureus MN8 0.00 1 1 S1 273036 Staphylococcus aureus RF122 0.63 918 918 S 70255 Staphylococcus condimenti 0.21 297 297 S 1290 Staphylococcus hominis 0.13 186 186 S 29378 Staphylococcus arlettae 0.04 62 0 G1 2815305 Staphylococcus intermedius group 0.04 58 58 S 283734 Staphylococcus pseudintermedius 0.00 4 4 S 53344 Staphylococcus delphini 0.04 60 60 S 985002 Staphylococcus argenteus 0.03 46 46 S 1282 Staphylococcus epidermidis 0.01 14 14 S 28035 Staphylococcus lugdunensis 0.01 8 8 S 201828 Staphylococcus casei 0.00 5 5 S 1286 Staphylococcus simulans 0.00 4 3 S 29388 Staphylococcus capitis 0.00 1 1 S1 74703 Staphylococcus capitis subsp. urealyticus 0.00 3 3 S 170573 Staphylococcus pettenkoferi 0.00 1 0 G1 91994 unclassified Staphylococcus 0.00 1 1 S 1715860 Staphylococcus sp. AntiMn-1 0.00 1 1 S 1283 Staphylococcus haemolyticus 0.34 495 0 G 2803850 Mammaliicoccus 0.34 495 495 S 1296 Mammaliicoccus sciuri 0.17 248 0 G 45669 Salinicoccus 0.17 248 0 G1 2628837 unclassified Salinicoccus 0.17 248 248 S 3136731 Salinicoccus sp. Bachu38 0.00 6 6 G 227979 Jeotgalicoccus 0.00 5 0 G 3076173 Macrococcoides 0.00 5 5 S 69966 Macrococcoides caseolyticum 1.63 2353 3 F 186820 Listeriaceae 1.20 1738 73 G 1637 Listeria 0.55 796 796 S 1639 Listeria monocytogenes 0.51 744 0 G1 2642072 unclassified Listeria 0.51 744 744 S 1844999 Listeria sp. PSOL-1 0.08 113 0 S 1638 Listeria ivanovii 0.08 113 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.08 113 113 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.01 8 8 S 1642 Listeria innocua 0.00 3 3 S 1006155 Listeria weihenstephanensis 0.00 1 1 S 1641 Listeria grayi 0.42 612 0 G 2755 Brochothrix 0.42 612 612 S 2756 Brochothrix thermosphacta 1.38 2005 11 F 186822 Paenibacillaceae 0.64 930 23 G 44249 Paenibacillus 0.22 314 314 S 562959 Paenibacillus cellulositrophicus 0.21 309 307 S 1406 Paenibacillus polymyxa 0.00 2 2 S1 1413214 Paenibacillus polymyxa SQR-21 0.07 97 97 S 2509456 Paenibacillus protaetiae 0.03 39 2 G1 185978 unclassified Paenibacillus 0.01 11 11 S 2921709 Paenibacillus sp. FSL W8-0186 0.01 10 10 S 2921361 Paenibacillus sp. FSL E2-0178 0.00 6 6 S 2211212 Paenibacillus sp. DCT19 0.00 5 5 S 2979727 Paenibacillus sp. KS-LC4 0.00 2 2 S 2921652 Paenibacillus sp. FSL R5-0636 0.00 2 2 S 2921677 Paenibacillus sp. FSL R7-0216 0.00 1 1 S 715179 Paenibacillus sp. sptzw28 0.02 30 30 S 2565926 Paenibacillus algicola 0.02 29 29 S 61624 Paenibacillus mucilaginosus 0.02 28 28 S 682956 Paenibacillus jilunlii 0.02 23 23 S 79263 Paenibacillus chitinolyticus 0.01 8 8 S 253703 Paenibacillus antarcticus 0.00 7 7 S 1778678 Paenibacillus psychroresistens 0.00 5 5 S 1178515 Paenibacillus swuensis 0.00 5 5 S 2704463 Paenibacillus rhizovicinus 0.00 4 4 G1 2044880 Paenibacillus sonchi group 0.00 3 3 S 1333845 Paenibacillus sophorae 0.00 2 2 S 1873425 Paenibacillus tritici 0.00 1 1 S 128574 Paenibacillus brasilensis 0.00 1 1 S 1174501 Paenibacillus typhae 0.00 1 1 S 2918900 Paenibacillus aurantius 0.00 1 1 S 2495582 Paenibacillus albus 0.49 703 0 G 329857 Cohnella 0.39 559 559 S 2674991 Cohnella candidum 0.10 144 144 S 2507935 Cohnella abietis 0.24 348 0 F1 85151 Aneurinibacillus group 0.24 348 96 G 55079 Aneurinibacillus 0.17 247 247 S 1500254 Aneurinibacillus soli 0.00 5 0 G1 2642329 unclassified Aneurinibacillus 0.00 5 5 S 3022697 Aneurinibacillus sp. Ricciae_BoGa-3 0.00 7 0 G 55080 Brevibacillus 0.00 4 4 S 1465 Brevibacillus laterosporus 0.00 3 3 S 45462 Brevibacillus borstelensis 0.00 5 0 G 456492 Saccharibacillus 0.00 5 5 S 2583377 Saccharibacillus brassicae 0.00 1 0 G 76632 Thermobacillus 0.00 1 0 S 377615 Thermobacillus composti 0.00 1 1 S1 717605 Thermobacillus composti KWC4 0.43 629 0 F 186823 Alicyclobacillaceae 0.43 626 5 G 29330 Alicyclobacillus 0.43 620 620 S 2931921 Alicyclobacillus mengziensis 0.00 1 1 S 1475485 Alicyclobacillus dauci 0.00 2 2 G 1129704 Kyrpidia 0.00 1 0 G 3156481 Fodinisporobacter 0.00 1 1 S 2901836 Fodinisporobacter ferrooxydans 0.40 576 7 F 186818 Planococcaceae 0.30 434 23 G 160795 Ureibacillus 0.23 333 333 S 367743 Ureibacillus thermophilus 0.05 78 78 S 51173 Ureibacillus thermosphaericus 0.04 60 0 G 889388 Chryseomicrobium 0.04 60 0 G1 2625558 unclassified Chryseomicrobium 0.04 60 60 S 2921704 Chryseomicrobium sp. FSL W7-1435 0.03 50 0 G 651660 Paenisporosarcina 0.03 48 48 S 2320858 Paenisporosarcina cavernae 0.00 2 2 S 417367 Paenisporosarcina antarctica 0.01 14 1 G 1372 Planococcus 0.01 13 0 G1 2662419 unclassified Planococcus (in: firmicutes) 0.01 13 13 S 2058136 Planococcus sp. MB-3u-03 0.01 9 6 G 1569 Sporosarcina 0.00 3 0 G1 2647733 unclassified Sporosarcina 0.00 2 2 S 1930546 Sporosarcina sp. P37 0.00 1 1 S 2810514 Sporosarcina sp. Marseille-Q4063 0.00 2 0 G 1649 Kurthia 0.00 2 2 S 1650 Kurthia zopfii 0.05 72 0 O1 539002 Bacillales incertae sedis 0.05 72 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.05 72 53 G 33986 Exiguobacterium 0.01 19 0 S 132920 Exiguobacterium antarcticum 0.01 19 19 S1 1087448 Exiguobacterium antarcticum B7 0.02 34 0 F 539738 Gemellaceae 0.02 34 1 G 1378 Gemella 0.02 33 33 G1 2624949 unclassified Gemella 0.01 9 0 F 186824 Thermoactinomycetaceae 0.00 6 0 G 1677050 Novibacillus 0.00 6 6 S 1471761 Novibacillus thermophilus 0.00 1 0 G 2023 Thermoactinomyces 0.00 1 1 S 2026 Thermoactinomyces vulgaris 0.00 1 0 G 292635 Laceyella 0.00 1 1 S 37482 Laceyella sacchari 0.00 1 1 G 1274351 Kroppenstedtia 0.00 6 0 F 3076164 Abyssicoccaceae 0.00 6 0 G 1955413 Abyssicoccus 0.00 6 6 S 1817405 Abyssicoccus albus 0.00 2 0 F 186821 Sporolactobacillaceae 0.00 1 0 G 2077 Sporolactobacillus 0.00 1 1 S 269673 Sporolactobacillus terrae 0.00 1 0 G 475230 Pullulanibacillus 0.00 1 0 G1 2640606 unclassified Pullulanibacillus 0.00 1 1 S 3028315 Pullulanibacillus sp. KACC 23026 28.54 41317 2695 O 186826 Lactobacillales 12.15 17585 4 F 81852 Enterococcaceae 12.02 17400 355 G 1350 Enterococcus 6.31 9132 9027 S 1351 Enterococcus faecalis 0.07 105 105 S1 1201292 Enterococcus faecalis ATCC 29212 3.21 4648 4538 S 1352 Enterococcus faecium 0.06 89 89 S1 1344042 Enterococcus faecium T110 0.01 14 14 S1 1328870 Enterococcus faecium UC7251 0.00 7 7 S1 333849 Enterococcus faecium DO 2.13 3078 3031 S 1354 Enterococcus hirae 0.03 47 47 S1 768486 Enterococcus hirae ATCC 9790 0.07 103 103 S 1353 Enterococcus gallinarum 0.03 46 46 S 37734 Enterococcus casseliflavus 0.03 38 38 S 44008 Enterococcus cecorum 0.07 103 49 G 2737 Vagococcus 0.03 40 0 G1 2648499 unclassified Vagococcus 0.03 40 40 S 3109030 Vagococcus sp. B2T-5 0.01 10 10 S 633807 Vagococcus penaei 0.00 4 4 S 2714946 Vagococcus coleopterorum 0.05 78 12 G 51668 Tetragenococcus 0.04 54 54 S 51669 Tetragenococcus halophilus 0.01 8 8 S 290335 Tetragenococcus koreensis 0.00 4 4 S 526944 Tetragenococcus osmophilus 9.97 14433 1103 F 33958 Lactobacillaceae 1.72 2484 0 G 2767886 Levilactobacillus 1.66 2403 2403 S 1580 Levilactobacillus brevis 0.06 80 80 S 2292255 Levilactobacillus suantsaii 0.00 1 1 S 267363 Levilactobacillus zymae 1.30 1875 877 G 2759736 Lacticaseibacillus 0.39 567 367 S 1597 Lacticaseibacillus paracasei 0.12 180 180 S1 113557 Lacticaseibacillus paracasei subsp. tolerans 0.01 20 0 S1 47714 Lacticaseibacillus paracasei subsp. paracasei 0.01 20 20 S2 537973 Lacticaseibacillus paracasei subsp. paracasei 8700:2 0.24 341 341 S 3025672 Lacticaseibacillus pabuli 0.05 72 72 S 47715 Lacticaseibacillus rhamnosus 0.01 12 12 S 171523 Lacticaseibacillus pantheris 0.00 4 4 S 57037 Lacticaseibacillus zeae 0.00 2 2 S 3068305 Lacticaseibacillus parahuelsenbergensis 1.19 1721 0 G 2767885 Latilactobacillus 1.18 1703 1702 S 1599 Latilactobacillus sakei 0.00 1 1 S1 214326 Latilactobacillus sakei subsp. sakei 0.01 18 18 S 28038 Latilactobacillus curvatus 0.93 1353 5 G 2767842 Lactiplantibacillus 0.60 873 873 S 1589 Lactiplantibacillus pentosus 0.33 472 346 S 1590 Lactiplantibacillus plantarum 0.09 126 126 S1 337330 Lactiplantibacillus plantarum subsp. plantarum 0.00 3 3 S 60520 Lactiplantibacillus paraplantarum 0.78 1131 59 G 1578 Lactobacillus 0.19 273 273 S 47770 Lactobacillus crispatus 0.12 175 175 S 1587 Lactobacillus helveticus 0.11 159 5 G1 2620435 unclassified Lactobacillus 0.10 149 149 S 2695882 Lactobacillus sp. 3B(2020) 0.00 4 4 S 2983232 Lactobacillus sp. ESL0785 0.00 1 1 S 2983221 Lactobacillus sp. ESL0731 0.10 149 0 S 1584 Lactobacillus delbrueckii 0.07 107 1 S1 1585 Lactobacillus delbrueckii subsp. bulgaricus 0.07 102 102 S2 321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 0.00 4 4 S2 390333 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 0.02 31 31 S1 29397 Lactobacillus delbrueckii subsp. lactis 0.01 11 0 S1 83684 Lactobacillus delbrueckii subsp. delbrueckii 0.01 11 11 S2 1423823 Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 = JCM 1012 0.10 140 132 S 1579 Lactobacillus acidophilus 0.01 8 8 S1 272621 Lactobacillus acidophilus NCFM 0.08 114 114 S 147802 Lactobacillus iners 0.03 47 47 S 83683 Lactobacillus amylolyticus 0.00 7 7 S 151781 Lactobacillus intestinalis 0.00 3 3 S 267818 Lactobacillus kefiranofaciens 0.00 2 2 S 1600 Lactobacillus acetotolerans 0.00 2 2 S 2012495 Lactobacillus panisapium 0.00 1 1 S 2107999 Lactobacillus paragasseri 0.75 1089 1075 G 2767893 Lentilactobacillus 0.01 8 8 S 1588 Lentilactobacillus hilgardii 0.00 6 0 S 1581 Lentilactobacillus buchneri 0.00 6 0 S1 2737512 Lentilactobacillus buchneri subsp. silagei 0.00 6 6 S2 1071400 Lentilactobacillus buchneri subsp. silagei CD034 0.67 965 162 G 2767887 Ligilactobacillus 0.42 607 573 S 1624 Ligilactobacillus salivarius 0.02 34 34 S1 1194971 Ligilactobacillus salivarius str. Ren 0.06 83 83 S 89059 Ligilactobacillus acidipiscis 0.03 46 46 S 1605 Ligilactobacillus animalis 0.03 41 41 S 1606 Ligilactobacillus aviarius 0.01 19 19 S 1601 Ligilactobacillus agilis 0.00 6 5 S 1623 Ligilactobacillus ruminis 0.00 1 1 S1 1069534 Ligilactobacillus ruminis ATCC 27782 0.00 1 1 S 3050131 Ligilactobacillus cholophilus 0.48 698 0 G 2930384 Periweissella 0.48 698 698 S 2506420 Periweissella cryptocerci 0.29 415 3 G 2742598 Limosilactobacillus 0.21 308 308 S 1598 Limosilactobacillus reuteri 0.07 95 95 S 1613 Limosilactobacillus fermentum 0.00 4 4 S 227942 Limosilactobacillus gastricus 0.00 3 3 S 35787 Limosilactobacillus pontis 0.00 2 2 S 1633 Limosilactobacillus vaginalis 0.26 376 14 G 2767881 Fructilactobacillus 0.24 348 348 S 1625 Fructilactobacillus sanfranciscensis 0.01 10 10 S 1614 Fructilactobacillus fructivorans 0.00 2 2 S 2940297 Fructilactobacillus carniphilus 0.00 2 2 S 2940300 Fructilactobacillus hinvesii 0.20 288 72 G 2767877 Apilactobacillus 0.14 209 209 S 2923364 Apilactobacillus apisilvae 0.00 7 7 S 1218495 Apilactobacillus apinorum 0.16 231 13 G 2767878 Bombilactobacillus 0.15 216 216 S 1303590 Bombilactobacillus bombi 0.00 2 2 S 2923363 Bombilactobacillus thymidiniphilus 0.15 219 70 G 1253 Pediococcus 0.05 71 71 S 480391 Pediococcus argentinicus 0.04 63 63 S 1255 Pediococcus pentosaceus 0.01 11 0 G1 1670797 Pediococcus acidilactici group 0.01 11 11 S 1254 Pediococcus acidilactici 0.00 3 3 S 51663 Pediococcus damnosus 0.00 1 0 G1 554805 unclassified Pediococcus 0.00 1 1 S 2962679 Pediococcus sp. AC40 0.14 200 194 G 1243 Leuconostoc 0.00 2 2 S 1246 Leuconostoc lactis 0.00 2 2 S 1252 Leuconostoc carnosum 0.00 1 1 S 2766470 Leuconostoc falkenbergense 0.00 1 1 G1 3016637 Leuconostoc gelidum group 0.04 58 0 G 2767892 Secundilactobacillus 0.04 56 56 S 176292 Secundilactobacillus malefermentans 0.00 2 2 S 240427 Secundilactobacillus paracollinoides 0.03 50 16 G 2767889 Loigolactobacillus 0.02 29 26 S 1610 Loigolactobacillus coryniformis 0.00 3 0 S1 115542 Loigolactobacillus coryniformis subsp. torquens 0.00 3 3 S2 1423822 Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 0.00 4 4 S 375175 Loigolactobacillus backii 0.00 1 1 S 1607 Loigolactobacillus bifermentans 0.03 41 0 G 2767882 Furfurilactobacillus 0.03 41 41 S 231049 Furfurilactobacillus rossiae 0.03 39 0 G 2767874 Acetilactobacillus 0.03 39 39 S 1720083 Acetilactobacillus jinshanensis 0.03 37 34 G 2767888 Liquorilactobacillus 0.00 2 2 S 82688 Liquorilactobacillus nagelii 0.00 1 0 S 468911 Liquorilactobacillus hordei 0.00 1 1 S1 1423759 Liquorilactobacillus hordei DSM 19519 0.01 20 0 G 2767879 Companilactobacillus 0.01 13 13 S 1847728 Companilactobacillus allii 0.00 3 3 S 938155 Companilactobacillus futsaii 0.00 3 3 S 1007676 Companilactobacillus ginsenosidimutans 0.00 1 0 S 1602 Companilactobacillus alimentarius 0.00 1 1 S1 1423720 Companilactobacillus alimentarius DSM 20249 0.01 20 8 G 46255 Weissella 0.00 7 7 S 155866 Weissella soli 0.00 2 2 S 759620 Weissella ceti 0.00 1 1 S 1249 Weissella paramesenteroides 0.00 1 1 S 137591 Weissella cibaria 0.00 1 1 S 1631871 Weissella jogaejeotgali 0.00 5 0 G 2767884 Lapidilactobacillus 0.00 5 5 S 51664 Lapidilactobacillus dextrinicus 0.00 5 0 G 2767891 Schleiferilactobacillus 0.00 5 5 S 304207 Schleiferilactobacillus harbinensis 0.00 4 0 G 2767876 Amylolactobacillus 0.00 4 0 S 1603 Amylolactobacillus amylophilus 0.00 4 4 S1 1423721 Amylolactobacillus amylophilus DSM 20533 = JCM 1125 0.00 4 4 G 46254 Oenococcus 0.00 2 2 G 3118928 Xylocopilactobacillus 2.97 4304 10 F 1300 Streptococcaceae 2.74 3969 613 G 1301 Streptococcus 0.93 1351 1351 S 1811193 Streptococcus pantholopis 0.39 564 283 S 1308 Streptococcus thermophilus 0.14 196 196 S1 322159 Streptococcus thermophilus LMD-9 0.06 85 85 S1 767463 Streptococcus thermophilus ND03 0.33 480 439 S 1311 Streptococcus agalactiae 0.03 41 41 S1 1203670 Streptococcus agalactiae GD201008-001 0.21 311 293 S 1314 Streptococcus pyogenes 0.01 18 0 S1 301449 Streptococcus pyogenes serotype M5 0.01 18 18 S2 160491 Streptococcus pyogenes str. Manfredo 0.14 205 205 S 1310 Streptococcus sobrinus 0.08 118 118 S 1346 Streptococcus iniae 0.06 83 83 S 1345 Streptococcus ferus 0.04 58 15 S 1313 Streptococcus pneumoniae 0.03 42 42 S1 869311 Streptococcus pneumoniae SPN032672 0.00 1 1 S1 1159083 Streptococcus pneumoniae PCS8235 0.03 50 50 S 1111760 Streptococcus troglodytae 0.03 43 43 S 68892 Streptococcus infantis 0.02 34 0 G1 119603 Streptococcus dysgalactiae group 0.02 34 33 S 1334 Streptococcus dysgalactiae 0.00 1 1 S1 119602 Streptococcus dysgalactiae subsp. equisimilis 0.01 15 14 G1 2608887 unclassified Streptococcus 0.00 1 1 S 2420310 Streptococcus sp. FDAARGOS_522 0.01 11 11 S 82348 Streptococcus pluranimalium 0.01 10 0 G1 671232 Streptococcus anginosus group 0.01 8 8 S 1328 Streptococcus anginosus 0.00 2 0 S 1338 Streptococcus intermedius 0.00 2 2 S1 862967 Streptococcus intermedius B196 0.01 10 10 S 2021971 Streptococcus respiraculi 0.00 5 5 S 2173853 Streptococcus chenjunshii 0.00 4 4 S 1304 Streptococcus salivarius 0.00 2 2 S 1307 Streptococcus suis 0.00 1 1 S 2686210 Streptococcus ruminicola 0.00 1 1 S 1309 Streptococcus mutans 0.22 321 53 G 1357 Lactococcus 0.15 219 219 S 1359 Lactococcus cremoris 0.03 41 0 S 1363 Lactococcus garvieae 0.03 41 41 S1 1890280 Lactococcus garvieae subsp. garvieae 0.01 8 8 S 1358 Lactococcus lactis 0.00 4 0 G 1930830 Floricoccus 0.00 4 4 S 1859475 Floricoccus penangensis 1.25 1808 163 F 186827 Aerococcaceae 0.64 923 0 G 2862144 Ruoffia 0.64 923 923 S 87458 Ruoffia tabacinasalis 0.32 465 134 G 1375 Aerococcus 0.18 265 265 S 87541 Aerococcus christensenii 0.03 43 43 S 3078812 Aerococcus tenax 0.02 23 23 S 128944 Aerococcus urinaehominis 0.16 231 0 G 66831 Facklamia 0.16 231 231 S 178214 Facklamia hominis 0.01 19 0 G 13075 Globicatella 0.01 19 19 S 13076 Globicatella sanguinis 0.00 5 0 G 89092 Ignavigranum 0.00 5 5 S 89093 Ignavigranum ruoffiae 0.00 1 0 G 2689587 Suicoccus 0.00 1 1 S 2036206 Suicoccus acidiformans 0.00 1 0 G 2761542 Fundicoccus 0.00 1 1 S 2969821 Fundicoccus culcitae 0.34 492 73 F 186828 Carnobacteriaceae 0.17 240 0 G 117563 Granulicatella 0.12 179 179 S 137732 Granulicatella elegans 0.04 61 61 S 46124 Granulicatella adiacens 0.07 95 0 G 82800 Desemzia 0.07 95 95 S 82801 Desemzia incerta 0.03 45 10 G 2747 Carnobacterium 0.02 34 8 S 2751 Carnobacterium maltaromaticum 0.02 26 26 S1 1234679 Carnobacterium maltaromaticum LMA28 0.00 1 1 G1 257487 unclassified Carnobacterium 0.01 18 0 G 191769 Marinilactibacillus 0.01 18 0 G1 2632303 unclassified Marinilactibacillus 0.01 18 18 S 1911586 Marinilactibacillus sp. 15R 0.01 14 0 G 29393 Dolosigranulum 0.01 14 14 S 29394 Dolosigranulum pigrum 0.00 4 0 G 82802 Trichococcus 0.00 4 0 G1 189664 environmental samples 0.00 4 4 S 189665 uncultured Trichococcus sp. 0.00 3 3 G 1470540 Jeotgalibaca 0.28 401 7 C 186801 Clostridia 0.23 333 13 O 186802 Eubacteriales 0.14 197 0 O1 538999 Eubacteriales incertae sedis 0.13 186 0 G 1392389 Intestinimonas 0.13 186 186 S 1297617 Intestinimonas butyriciproducens 0.01 11 0 F 539000 Clostridiales Family XVII. Incertae Sedis 0.01 11 11 G 73918 Thermaerobacter 0.04 51 4 F 31979 Clostridiaceae 0.03 47 6 G 1485 Clostridium 0.02 30 30 S 1502 Clostridium perfringens 0.00 3 0 G1 2614128 unclassified Clostridium 0.00 1 1 S 641107 Clostridium sp. DL-VIII 0.00 1 1 S 1042156 Clostridium sp. SY8519 0.00 1 1 S 2779445 Clostridium sp. 'deep sea' 0.00 2 2 S 1491 Clostridium botulinum 0.00 2 2 S 1492 Clostridium butyricum 0.00 1 1 S 1501 Clostridium pasteurianum 0.00 1 1 S 36845 Clostridium intestinale 0.00 1 1 S 182773 Clostridium isatidis 0.00 1 1 S 1534 Clostridium kluyveri 0.02 34 5 F 216572 Oscillospiraceae 0.01 16 0 G 1263 Ruminococcus 0.01 16 16 S 2564099 Ruminococcus bovis 0.01 10 0 G 459786 Oscillibacter 0.01 10 10 S 2763056 Oscillibacter hominis 0.00 1 0 G 216851 Faecalibacterium 0.00 1 1 S 853 Faecalibacterium prausnitzii 0.00 1 0 G 244127 Anaerotruncus 0.00 1 1 S 169435 Anaerotruncus colihominis 0.00 1 0 G 946234 Flavonifractor 0.00 1 1 S 292800 Flavonifractor plautii 0.01 20 0 F 2867375 Desulfallaceae 0.01 20 0 G 2867376 Desulfoscipio 0.01 18 0 G1 2867378 unclassified Desulfoscipio 0.01 18 18 S 3144975 Desulfoscipio sp. XC116 0.00 2 0 S 102134 Desulfoscipio gibsoniae 0.00 2 2 S1 767817 Desulfoscipio gibsoniae DSM 7213 0.00 6 0 F 186807 Peptococcaceae 0.00 5 0 G 2916693 Desulforamulus 0.00 4 4 S 1833852 Desulforamulus ferrireducens 0.00 1 0 S 1564 Desulforamulus ruminis 0.00 1 1 S1 696281 Desulforamulus ruminis DSM 2154 0.00 1 0 G 471826 Candidatus Desulforudis 0.00 1 1 S 471827 Candidatus Desulforudis audaxviator 0.00 6 0 F 3046368 Aristaeellaceae 0.00 6 6 G 3046369 Aristaeella 0.00 3 2 F 31984 Heliobacteriaceae 0.00 1 0 G 79598 Heliorestis 0.00 1 1 S 356322 Heliorestis convoluta 0.00 2 0 F 3082771 Acutalibacteraceae 0.00 2 2 G 1738645 Caproiciproducens 0.00 1 1 F 186806 Eubacteriaceae 0.02 33 0 O 53433 Halanaerobiales 0.02 33 0 F 53434 Halobacteroidaceae 0.02 33 0 G 42417 Halobacteroides 0.02 33 0 S 42422 Halobacteroides halobius 0.02 33 33 S1 748449 Halobacteroides halobius DSM 5150 0.01 14 0 O 3082720 Peptostreptococcales 0.01 11 3 F 186804 Peptostreptococcaceae 0.00 5 0 G 1870884 Clostridioides 0.00 5 4 S 1496 Clostridioides difficile 0.00 1 1 S1 699033 Clostridioides difficile 2007855 0.00 3 0 G 1849822 Paraclostridium 0.00 3 3 S 1505 Paraclostridium sordellii 0.00 2 0 F 3118656 Natronincolaceae 0.00 2 0 G 1890059 Serpentinicella 0.00 2 2 S 1734049 Serpentinicella alkaliphila 0.00 1 0 F 3030910 Anaerovoracaceae 0.00 1 1 G 86331 Mogibacterium 0.01 10 0 O 3085636 Lachnospirales 0.01 10 2 F 186803 Lachnospiraceae 0.00 4 0 G 572511 Blautia 0.00 4 0 G1 2648079 unclassified Blautia 0.00 4 4 S 2479767 Blautia sp. SC05B48 0.00 2 0 G 2997360 Anaeropeptidivorans 0.00 2 2 S 2934315 Anaeropeptidivorans aminofermentans 0.00 1 1 G 1843210 Anaerocolumna 0.00 1 0 G 28050 Lachnospira 0.00 1 1 S 39485 Lachnospira eligens 0.00 2 0 O 3082768 Christensenellales 0.00 2 0 F 990719 Christensenellaceae 0.00 2 2 G 990721 Christensenella 0.00 1 0 O 68295 Thermoanaerobacterales 0.00 1 0 F 186814 Thermoanaerobacteraceae 0.00 1 0 G 42837 Ammonifex 0.00 1 0 S 42838 Ammonifex degensii 0.00 1 1 S1 429009 Ammonifex degensii KC4 0.00 1 0 O 485256 Natranaerobiales 0.00 1 0 F 2807496 Natranaerofabaceae 0.00 1 0 G 2807497 Natranaerofaba 0.00 1 1 S 2742683 Natranaerofaba carboxydovora 0.02 24 0 C 526524 Erysipelotrichia 0.02 24 1 O 526525 Erysipelotrichales 0.01 20 0 F 128827 Erysipelotrichaceae 0.01 19 0 G 1918536 Longicatena 0.01 19 19 S 1796635 Longicatena caecimuris 0.00 1 0 G 1647 Erysipelothrix 0.00 1 0 G1 2624170 unclassified Erysipelothrix 0.00 1 1 S 2714928 Erysipelothrix sp. HDW6A 0.00 2 0 F 2810281 Turicibacteraceae 0.00 2 1 G 191303 Turicibacter 0.00 1 0 G1 2638206 unclassified Turicibacter 0.00 1 1 S 1712675 Turicibacter sp. H121 0.00 1 0 F 2810280 Coprobacillaceae 0.00 1 0 G 2943184 Tannockella 0.00 1 1 S 2899121 Tannockella kyphosi 0.01 9 0 C 909932 Negativicutes 0.01 8 0 O 909929 Selenomonadales 0.00 7 0 F 1843490 Sporomusaceae 0.00 7 0 G 81463 Anaeromusa 0.00 7 0 G1 673272 environmental samples 0.00 7 7 S 673273 uncultured Anaeromusa sp. 0.00 1 0 F 1843491 Selenomonadaceae 0.00 1 1 G 970 Selenomonas 0.00 1 0 O 1843489 Veillonellales 0.00 1 0 F 31977 Veillonellaceae 0.00 1 0 G 906 Megasphaera 0.00 1 1 S 907 Megasphaera elsdenii 0.00 4 0 C 1676648 Limnochordia 0.00 4 0 O 1676649 Limnochordales 0.00 4 0 F 1676650 Limnochordaceae 0.00 4 2 G 1676651 Limnochorda 0.00 2 0 G1 2618576 unclassified Limnochorda 0.00 1 1 S 3109564 Limnochorda sp. LNt 0.00 1 1 S 3109565 Limnochorda sp. L945t 0.00 1 0 C 1737404 Tissierellia 0.00 1 0 O 1737405 Tissierellales 0.00 1 0 F 1570339 Peptoniphilaceae 0.00 1 0 G 150022 Finegoldia 0.00 1 1 S 1260 Finegoldia magna 0.89 1295 0 P 201174 Actinomycetota 0.89 1287 22 C 1760 Actinomycetes 0.82 1186 5 O 85007 Mycobacteriales 0.80 1163 0 F 1653 Corynebacteriaceae 0.80 1163 119 G 1716 Corynebacterium 0.67 976 0 S 1032851 Corynebacterium nuruki 0.67 976 976 S1 863239 Corynebacterium nuruki S6-4 0.01 12 12 S 161895 Corynebacterium phocae 0.01 8 0 S 441501 Corynebacterium massiliense 0.01 8 8 S1 1121364 Corynebacterium massiliense DSM 45435 0.00 7 7 S 61592 Corynebacterium durum 0.00 6 6 S 1719 Corynebacterium pseudotuberculosis 0.00 5 0 G1 2624378 unclassified Corynebacterium 0.00 4 4 S 1487956 Corynebacterium sp. ATCC 6931 0.00 1 1 S 2599641 Corynebacterium sp. sy039 0.00 4 4 S 1737425 Corynebacterium provencense 0.00 3 3 S 43768 Corynebacterium matruchotii 0.00 3 3 S 2080740 Corynebacterium yudongzhengii 0.00 3 3 S 2055947 Corynebacterium heidelbergense 0.00 2 2 S 108486 Corynebacterium falsenii 0.00 2 0 S 1230998 Corynebacterium frankenforstense 0.00 2 2 S1 1437875 Corynebacterium frankenforstense DSM 45800 0.00 2 2 S 38284 Corynebacterium accolens 0.00 2 0 S 89154 Corynebacterium terpenotabidum 0.00 2 2 S1 1200352 Corynebacterium terpenotabidum Y-11 0.00 2 2 S 1758466 Corynebacterium faecale 0.00 2 2 S 679663 Corynebacterium canis 0.00 1 0 S 203263 Corynebacterium aquilae 0.00 1 1 S1 1431546 Corynebacterium aquilae DSM 44791 0.00 1 0 S 225326 Corynebacterium halotolerans 0.00 1 1 S1 1121362 Corynebacterium halotolerans YIM 70093 = DSM 44683 0.00 1 1 S 3049799 Corynebacterium breve 0.00 1 1 S 43771 Corynebacterium urealyticum 0.00 1 1 S 39791 Corynebacterium glucuronolyticum 0.01 10 0 F 2805586 Lawsonellaceae 0.01 10 0 G 1847725 Lawsonella 0.01 10 10 S 1528099 Lawsonella clevelandensis 0.00 5 0 F 1762 Mycobacteriaceae 0.00 5 3 G 1763 Mycobacterium 0.00 1 1 S 1769 Mycobacterium leprae 0.00 1 0 G1 77643 Mycobacterium tuberculosis complex 0.00 1 1 S 1773 Mycobacterium tuberculosis 0.00 3 0 F 85025 Nocardiaceae 0.00 2 1 G 1827 Rhodococcus 0.00 1 0 G1 2840174 Rhodococcus erythropolis group 0.00 1 1 S 334542 Rhodococcus qingshengii 0.00 1 1 G 1817 Nocardia 0.03 42 4 O 85006 Micrococcales 0.01 21 0 F 85019 Brevibacteriaceae 0.01 21 21 G 1696 Brevibacterium 0.01 11 4 F 85023 Microbacteriaceae 0.00 2 0 G 33882 Microbacterium 0.00 1 1 S 69362 Microbacterium schleiferi 0.00 1 1 S 2509458 Microbacterium protaetiae 0.00 2 0 G 120212 Subtercola 0.00 2 0 G1 2648727 unclassified Subtercola 0.00 2 2 S 2846775 Subtercola sp. PAMC28395 0.00 1 0 G 447237 Frondihabitans 0.00 1 0 G1 2626248 unclassified Frondihabitans 0.00 1 1 S 1446794 Frondihabitans sp. 762G35 0.00 1 0 G 1857011 Lysinibacter 0.00 1 0 G1 2619652 unclassified Lysinibacter 0.00 1 1 S 3031408 Lysinibacter sp. HNR 0.00 1 0 F1 1655488 Luna cluster 0.00 1 0 F2 1655489 Luna-1 subcluster 0.00 1 0 G 529881 Aquiluna 0.00 1 0 G1 2617988 unclassified Aquiluna 0.00 1 1 S 1855377 Candidatus Aquiluna sp. UB-MaderosW2red 0.00 4 2 F 1268 Micrococcaceae 0.00 2 2 G 1160973 Auritidibacter 0.00 1 0 F 1331736 Ruaniaceae 0.00 1 0 G 2828348 Occultella 0.00 1 1 S 2675754 Occultella kanbiaonis 0.00 1 0 F 145360 Sanguibacteraceae 0.00 1 1 G 60919 Sanguibacter 0.01 14 0 O 85009 Propionibacteriales 0.01 11 1 F 31957 Propionibacteriaceae 0.00 6 5 G 29404 Microlunatus 0.00 1 0 G1 2619695 unclassified Microlunatus 0.00 1 1 S 2672569 Microlunatus sp. Gsoil 973 0.00 2 0 G 1912216 Cutibacterium 0.00 2 2 S 1747 Cutibacterium acnes 0.00 2 0 G 2801844 Arachnia 0.00 1 1 S 1750 Arachnia propionica 0.00 1 1 S 1547448 Arachnia rubra 0.00 2 1 F 85015 Nocardioidaceae 0.00 1 1 G 2040 Aeromicrobium 0.00 1 0 F 2805400 Actinopolymorphaceae 0.00 1 0 G 117156 Actinopolymorpha 0.00 1 1 S 117157 Actinopolymorpha singaporensis 0.01 11 0 O 85011 Kitasatosporales 0.01 11 3 F 2062 Streptomycetaceae 0.01 8 0 G 1883 Streptomyces 0.00 4 0 G1 2593676 unclassified Streptomyces 0.00 2 2 S 3075825 Streptomyces sp. AM8-1-1 0.00 1 1 S 2099583 Streptomyces sp. ICC1 0.00 1 1 S 2933779 Streptomyces sp. WAC00303 0.00 2 2 S 35621 Streptomyces mobaraensis 0.00 1 1 S 1690221 Streptomyces spongiicola 0.00 1 0 G1 1477431 Streptomyces albidoflavus group 0.00 1 1 S 1886 Streptomyces albidoflavus 0.00 4 0 O 85014 Glycomycetales 0.00 4 0 F 85034 Glycomycetaceae 0.00 4 0 G 283810 Stackebrandtia 0.00 4 0 S 283811 Stackebrandtia nassauensis 0.00 4 4 S1 446470 Stackebrandtia nassauensis DSM 44728 0.00 3 0 O 85004 Bifidobacteriales 0.00 3 0 F 31953 Bifidobacteriaceae 0.00 3 0 G 1678 Bifidobacterium 0.00 2 0 S 216816 Bifidobacterium longum 0.00 1 1 S1 1679 Bifidobacterium longum subsp. longum 0.00 1 1 S1 1682 Bifidobacterium longum subsp. infantis 0.00 1 1 S 77635 Bifidobacterium subtile 0.00 3 0 O 2037 Actinomycetales 0.00 3 2 F 2049 Actinomycetaceae 0.00 1 1 G 1654 Actinomyces 0.00 1 0 O 85010 Pseudonocardiales 0.00 1 1 F 2070 Pseudonocardiaceae 0.00 1 0 O 85012 Streptosporangiales 0.00 1 0 F 83676 Nocardiopsaceae 0.00 1 0 G 2013 Nocardiopsis 0.00 1 1 S 2831968 Nocardiopsis akebiae 0.00 4 0 C 84992 Acidimicrobiia 0.00 4 0 O 84993 Acidimicrobiales 0.00 4 0 F 633392 Iamiaceae 0.00 4 0 G 467975 Iamia 0.00 4 4 S 467976 Iamia majanohamensis 0.00 3 0 C 84998 Coriobacteriia 0.00 2 0 O 84999 Coriobacteriales 0.00 2 0 F 84107 Coriobacteriaceae 0.00 2 0 G 33870 Coriobacterium 0.00 2 0 S 33871 Coriobacterium glomerans 0.00 2 2 S1 700015 Coriobacterium glomerans PW2 0.00 1 0 O 1643822 Eggerthellales 0.00 1 0 F 1643826 Eggerthellaceae 0.00 1 0 G 84162 Cryptobacterium 0.00 1 0 S 84163 Cryptobacterium curtum 0.00 1 1 S1 469378 Cryptobacterium curtum DSM 15641 0.00 1 0 C 1497346 Thermoleophilia 0.00 1 0 O 588673 Solirubrobacterales 0.00 1 0 F 2600303 Baekduiaceae 0.00 1 0 G 3231543 Svornostia 0.00 1 1 S 2898438 Svornostia abyssi 0.02 31 10 P 544448 Mycoplasmatota 0.01 14 1 C 31969 Mollicutes 0.00 6 0 O 186328 Entomoplasmatales 0.00 4 0 F 2131 Spiroplasmataceae 0.00 4 1 G 2132 Spiroplasma 0.00 2 0 S 301585 Spiroplasma platyhelix 0.00 2 2 S1 1276218 Spiroplasma platyhelix PALS-1 0.00 1 0 G1 2637901 unclassified Spiroplasma 0.00 1 1 S 2792084 Spiroplasma endosymbiont of 'Nebria riversi' 0.00 2 0 F 33925 Entomoplasmataceae 0.00 2 0 G 46239 Mesoplasma 0.00 2 0 S 138853 Mesoplasma lactucae 0.00 2 2 S1 81460 Mesoplasma lactucae ATCC 49193 0.00 5 0 O 186329 Acholeplasmatales 0.00 5 0 F 2146 Acholeplasmataceae 0.00 5 5 G 33926 Candidatus Phytoplasma 0.00 2 0 O 2085 Mycoplasmatales 0.00 1 0 F 2092 Mycoplasmataceae 0.00 1 0 G 2093 Mycoplasma 0.00 1 0 G1 656088 Mycoplasma mycoides group 0.00 1 0 S 2095 Mycoplasma capricolum 0.00 1 1 S1 40480 Mycoplasma capricolum subsp. capripneumoniae 0.00 1 0 O1 1665628 unclassified Mycoplasmatales 0.00 1 1 S 1609546 endosymbiont DhMRE of Dentiscutata heterogama 0.00 5 0 O 2790996 Mycoplasmoidales 0.00 5 0 F 2790998 Mycoplasmoidaceae 0.00 3 2 G 2995234 Mycoplasmoides 0.00 1 1 S 92758 Mycoplasmoides fastidiosum 0.00 2 0 G 2791001 Malacoplasma 0.00 2 0 S 28227 Malacoplasma penetrans 0.00 2 2 S1 272633 Malacoplasma penetrans HF-2 0.00 2 0 C 1912503 Candidatus Izimaplasma 0.00 2 0 O 2975519 Candidatus Izemoplasmatales 0.00 2 0 F 3078170 Hujiaoplasmataceae 0.00 2 0 G 3078171 Hujiaoplasma 0.00 2 2 S 2725268 Hujiaoplasma nucleasis 0.01 11 0 P 200795 Chloroflexota 0.00 7 0 C 32061 Chloroflexia 0.00 7 0 O 3139175 Candidatus Chloroheliales 0.00 7 0 F 3139177 Candidatus Chloroheliaceae 0.00 7 0 G 3139173 Candidatus Chlorohelix 0.00 7 7 S 3003348 Candidatus Chlorohelix allophototropha 0.00 2 0 C 292625 Anaerolineae 0.00 2 0 O 292629 Anaerolineales 0.00 2 0 F 292628 Anaerolineaceae 0.00 2 0 G 233189 Anaerolinea 0.00 2 0 S 167964 Anaerolinea thermophila 0.00 2 2 S1 926569 Anaerolinea thermophila UNI-1 0.00 2 0 C 2682225 Tepidiformia 0.00 2 0 O 2682226 Tepidiformales 0.00 2 0 F 2682227 Tepidiformaceae 0.00 2 2 G 2682228 Tepidiforma 0.01 10 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.01 10 0 P 1117 Cyanobacteriota 0.01 10 2 C 3028117 Cyanophyceae 0.00 5 0 C1 1301283 Oscillatoriophycideae 0.00 5 0 O 1118 Chroococcales 0.00 5 0 F 2815910 Geminocystaceae 0.00 5 0 G 669357 Geminocystis 0.00 5 0 G1 2625037 unclassified Geminocystis 0.00 5 5 S 1615909 Geminocystis sp. NIES-3708 0.00 2 0 O 1161 Nostocales 0.00 1 0 F 1162 Nostocaceae 0.00 1 0 G 1177 Nostoc 0.00 1 0 G1 2593658 unclassified Nostoc 0.00 1 1 S 2914041 Nostoc sp. UHCC 0870 0.00 1 0 F 2661849 Calotrichaceae 0.00 1 0 G 1186 Calothrix 0.00 1 1 G1 2619626 unclassified Calothrix 0.00 1 1 O 307595 Gloeobacterales 0.00 1 0 P 1297 Deinococcota 0.00 1 0 C 188787 Deinococci 0.00 1 0 O 118964 Deinococcales 0.00 1 0 F 183710 Deinococcaceae 0.00 1 0 G 1298 Deinococcus 0.00 1 1 S 32062 Deinococcus radiophilus 0.00 1 0 P 3027942 Thermomicrobiota 0.00 1 0 C 189775 Thermomicrobia 0.00 1 0 O 85001 Sphaerobacterales 0.00 1 0 O1 255728 Sphaerobacterineae 0.00 1 0 F 85002 Sphaerobacteraceae 0.00 1 0 G 2056 Sphaerobacter 0.00 1 0 S 2057 Sphaerobacter thermophilus 0.00 1 1 S1 479434 Sphaerobacter thermophilus DSM 20745 4.52 6543 69 P 1224 Pseudomonadota 3.75 5423 132 C 28211 Alphaproteobacteria 3.37 4873 6 O 204441 Rhodospirillales 3.35 4846 380 F 433 Acetobacteraceae 2.88 4165 678 G 434 Acetobacter 2.35 3403 3403 S 1076596 Acetobacter persici 0.03 50 50 S 2592655 Acetobacter vaccinii 0.01 21 0 G1 2628570 unclassified Acetobacter 0.01 21 21 S 3157859 Acetobacter sp. A11-2 0.00 7 0 G1 151157 Acetobacter subgen. Acetobacter 0.00 7 7 S 435 Acetobacter aceti 0.00 6 6 S 65959 Acetobacter pomorum 0.05 70 0 G 1079922 Commensalibacter 0.05 70 70 S 2070537 Commensalibacter melissae 0.03 45 2 G 125216 Roseomonas 0.03 41 41 S 2768162 Roseomonas haemaphysalidis 0.00 1 1 S 1750527 Roseomonas fluvialis 0.00 1 0 G1 2617492 unclassified Roseomonas 0.00 1 1 S 2897332 Roseomonas sp. OT10 0.03 37 0 G 3027666 Aristophania 0.03 37 37 S 2697033 Aristophania vespae 0.03 37 0 G 504465 Rhodovastum 0.03 37 37 S 504468 Rhodovastum atsumiense 0.02 30 27 G 1602345 Parasaccharibacter 0.00 2 0 G1 2626400 unclassified Parasaccharibacter 0.00 2 2 S 2268025 Parasaccharibacter sp. TMW 2.1888 0.00 1 1 S 1510841 Parasaccharibacter apium 0.01 18 9 G 441 Gluconobacter 0.00 4 0 S 442 Gluconobacter oxydans 0.00 4 4 S1 1288313 Gluconobacter oxydans DSM 3504 0.00 4 4 S 318683 Gluconobacter albidus 0.00 1 1 S 38308 Gluconobacter frateurii 0.01 17 3 G 1434011 Komagataeibacter 0.00 7 0 S 1177712 Komagataeibacter medellinensis 0.00 7 7 S1 634177 Komagataeibacter medellinensis NBRC 3288 0.00 4 4 S 65958 Komagataeibacter oboediens 0.00 3 3 S 265960 Komagataeibacter nataicola 0.01 11 0 G 50709 Acidocella 0.01 11 0 G1 2648610 unclassified Acidocella 0.01 11 11 S 2697363 Acidocella sp. MX-AZ03 0.01 8 0 G 3097638 Candidatus Kirkpatrickella 0.01 8 8 S 2984322 Candidatus Kirkpatrickella diaphorinae 0.00 6 0 G 2811380 Entomobacter 0.00 6 6 S 2762277 Entomobacter blattae 0.00 5 0 G 364409 Granulibacter 0.00 5 5 S 364410 Granulibacter bethesdensis 0.00 4 0 G 91914 Asaia 0.00 4 0 S 91915 Asaia bogorensis 0.00 4 4 S1 1231624 Asaia bogorensis NBRC 16594 0.00 3 0 G 512381 Acidisoma 0.00 3 0 G1 2634065 unclassified Acidisoma 0.00 3 3 S 3040935 Acidisoma sp. PAMC 29798 0.00 3 0 G 2791118 Oecophyllibacter 0.00 3 3 S 2558360 Oecophyllibacter saccharovorans 0.00 2 0 G 1519186 Nguyenibacter 0.00 2 2 S 1216886 Nguyenibacter vanlangensis 0.00 2 0 G 35812 Roseococcus 0.00 2 2 S 2771361 Roseococcus microcysteis 0.00 1 1 G 1706033 Sediminicoccus 0.00 1 0 G 2804525 Lichenicola 0.00 1 1 S 1484109 Lichenicola cladoniae 0.00 1 0 G 2603324 Acidibrevibacterium 0.00 1 1 S 1969806 Acidibrevibacterium fodinaquatile 0.01 12 0 F 3031144 Dongiaceae 0.01 12 5 G 2705399 Hypericibacter 0.00 7 7 S 2602016 Hypericibacter adhaerens 0.00 3 0 F 41295 Rhodospirillaceae 0.00 2 0 G 1231242 Ferrovibrio 0.00 2 2 S 2594003 Ferrovibrio terrae 0.00 1 0 G 111830 Defluviicoccus 0.00 1 1 S 111831 Defluviicoccus vanus 0.00 3 0 F 597359 Kiloniellaceae 0.00 3 0 G 1647175 Aestuariispira 0.00 3 3 S 2775080 Aestuariispira ectoiniformans 0.00 2 0 F 2844601 Stellaceae 0.00 2 0 G 93 Stella 0.00 2 2 S 94 Stella humosa 0.00 1 0 F 2829815 Azospirillaceae 0.00 1 0 G 191 Azospirillum 0.00 1 1 S 1064539 Azospirillum baldaniorum 0.14 199 0 O 766 Rickettsiales 0.13 191 0 F 942 Anaplasmataceae 0.13 191 0 F1 952 Wolbachieae 0.13 191 0 G 953 Wolbachia 0.13 190 0 G1 2640676 unclassified Wolbachia 0.13 190 190 S 375919 Wolbachia endosymbiont of Drosophila pseudotakahashii 0.00 1 1 S 955 Wolbachia pipientis 0.00 7 0 F 775 Rickettsiaceae 0.00 7 3 F1 33988 Rickettsieae 0.00 4 0 G 780 Rickettsia 0.00 2 0 G1 114295 unclassified Rickettsia 0.00 1 1 S 1182263 Rickettsia sp. MEAM1 (Bemisia tabaci) 0.00 1 1 S 3066251 Rickettsia endosymbiont of Polydrusus tereticollis 0.00 2 0 G1 1129742 belli group 0.00 2 2 S 788 Rickettsia canadensis 0.00 1 0 F 1328881 Candidatus Midichloriaceae 0.00 1 0 G 411566 Candidatus Midichloria 0.00 1 0 S 234827 Candidatus Midichloria mitochondrii 0.00 1 1 S1 696127 Candidatus Midichloria mitochondrii IricVA 0.06 89 2 O 356 Hyphomicrobiales 0.02 23 1 F 82115 Rhizobiaceae 0.01 12 2 F1 227290 Rhizobium/Agrobacterium group 0.00 7 0 G 1612611 Pararhizobium 0.00 7 4 G1 2643050 unclassified Pararhizobium 0.00 3 3 S 3067903 Pararhizobium sp. IMCC21322 0.00 2 0 G 357 Agrobacterium 0.00 2 0 G1 1183400 Agrobacterium tumefaciens complex 0.00 2 2 S 358 Agrobacterium tumefaciens 0.00 1 0 G 1525371 Neorhizobium 0.00 1 1 S 515361 Neorhizobium petrolearium 0.01 8 0 F1 227292 Sinorhizobium/Ensifer group 0.01 8 0 G 28105 Sinorhizobium 0.01 8 8 S 382 Sinorhizobium meliloti 0.00 2 0 G 34019 Liberibacter 0.00 1 0 S 309868 Candidatus Liberibacter americanus 0.00 1 1 S1 1261131 Candidatus Liberibacter americanus str. Sao Paulo 0.00 1 0 S 556287 Candidatus Liberibacter solanacearum 0.00 1 1 S1 658172 Candidatus Liberibacter solanacearum CLso-ZC1 0.01 17 0 F 2813035 Parvibaculaceae 0.01 17 0 G 2838250 Kaustia 0.01 17 17 S 2593653 Kaustia mangrovi 0.01 17 0 F 772 Bartonellaceae 0.01 17 0 G 773 Bartonella 0.01 17 17 S 2267275 Bartonella krasnovii 0.01 11 0 F 45401 Hyphomicrobiaceae 0.01 11 11 G 81 Hyphomicrobium 0.00 7 2 F 41294 Nitrobacteraceae 0.00 4 0 G 1395974 Tardiphaga 0.00 4 4 S 340268 Tardiphaga alba 0.00 1 0 G 1073 Rhodopseudomonas 0.00 1 1 S 1076 Rhodopseudomonas palustris 0.00 3 0 F 118882 Brucellaceae 0.00 3 0 F1 2826938 Brucella/Ochrobactrum group 0.00 3 1 G 234 Brucella 0.00 2 0 S 29459 Brucella melitensis 0.00 2 0 S1 645169 Brucella melitensis bv. 2 0.00 2 2 S2 520465 Brucella melitensis bv. 2 str. 63/9 0.00 3 0 O1 119042 Hyphomicrobiales incertae sedis 0.00 3 0 G 212791 Enhydrobacter 0.00 3 0 G1 2632691 unclassified Enhydrobacter 0.00 3 3 S 1894999 Enhydrobacter sp. 0.00 3 0 F 255475 Aurantimonadaceae 0.00 3 1 G 414371 Aureimonas 0.00 2 0 G1 2615206 unclassified Aureimonas 0.00 2 2 S 2826993 Aureimonas sp. SA4125 0.00 1 0 F 119045 Methylobacteriaceae 0.00 1 0 G 186650 Microvirga 0.00 1 1 S 864069 Microvirga lotononidis 0.00 1 0 F 335928 Xanthobacteraceae 0.00 1 0 G 279 Xanthobacter 0.00 1 1 S 280 Xanthobacter autotrophicus 0.00 1 0 F 2843305 Phreatobacteraceae 0.00 1 0 G 1632780 Phreatobacter 0.00 1 1 S 1868589 Phreatobacter cathodiphilus 0.03 46 0 O 204457 Sphingomonadales 0.02 36 0 F 335929 Erythrobacteraceae 0.02 34 0 G 2800686 Tsuneonella 0.02 33 0 G1 2800703 unclassified Tsuneonella 0.02 33 33 S 3042152 Tsuneonella sp. CC-YZS046 0.00 1 1 S 2338327 Tsuneonella amylolytica 0.00 2 0 G 361177 Altererythrobacter 0.00 1 1 S 2173831 Altererythrobacter rubellus 0.00 1 0 G1 2614945 unclassified Altererythrobacter 0.00 1 1 S 2060312 Altererythrobacter sp. B11 0.01 8 0 F 41297 Sphingomonadaceae 0.00 4 3 G 165696 Novosphingobium 0.00 1 0 G1 2644732 unclassified Novosphingobium 0.00 1 1 S 1609758 Novosphingobium sp. P6W 0.00 2 0 G 1434046 Sphingorhabdus 0.00 2 2 S 1913578 Sphingorhabdus lutea 0.00 1 0 G 13687 Sphingomonas 0.00 1 1 S 1176646 Sphingomonas daechungensis 0.00 1 1 G 165695 Sphingobium 0.00 2 0 F 2844881 Zymomonadaceae 0.00 2 0 G 541 Zymomonas 0.00 2 2 S 542 Zymomonas mobilis 0.02 29 20 O 204455 Rhodobacterales 0.00 7 1 F 31989 Paracoccaceae 0.00 6 0 G 2816884 Qingshengfaniella 0.00 6 6 S 2599296 Qingshengfaniella alkalisoli 0.00 2 0 F 2854170 Roseobacteraceae 0.00 2 2 G 92944 Ketogulonicigenium 0.02 27 0 O 204458 Caulobacterales 0.02 27 1 F 76892 Caulobacteraceae 0.01 13 13 G 76890 Asticcacaulis 0.01 12 10 G 41275 Brevundimonas 0.00 2 2 S 172043 Brevundimonas nasdae 0.00 1 0 G 20 Phenylobacterium 0.00 1 1 S 2201350 Phenylobacterium parvum 0.01 11 0 O 3108222 Geminicoccales 0.01 11 0 F 2066434 Geminicoccaceae 0.01 11 0 G 171436 Tistrella 0.01 11 0 S 171437 Tistrella mobilis 0.01 11 11 S1 1110502 Tistrella mobilis KA081020-065 0.01 9 0 O 1921002 Holosporales 0.00 5 0 F 1777752 Candidatus Paracaedibacteraceae 0.00 3 0 G 3163645 Candidatus Bodocaedibacter 0.00 3 3 S 2741701 Candidatus Bodocaedibacter vickermanii 0.00 2 0 G 1521255 Candidatus Paracaedibacter 0.00 2 2 S 91604 Candidatus Paracaedibacter acanthamoebae 0.00 4 1 F 44746 Holosporaceae 0.00 2 0 G 2654634 Candidatus Hydrogenosomobacter 0.00 2 2 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus 0.00 1 1 G 2601574 Candidatus Cytomitobacter 0.00 4 0 O 255473 Parvularculales 0.00 4 1 F 255474 Parvularculaceae 0.00 3 0 G 208215 Parvularcula 0.00 3 0 G1 2647080 unclassified Parvularcula 0.00 3 3 S 3067902 Parvularcula sp. IMCC14364 0.00 2 0 O 54526 Candidatus Pelagibacterales 0.00 2 0 F 1655514 Candidatus Pelagibacteraceae 0.00 2 1 G 198251 Candidatus Pelagibacter 0.00 1 0 G1 2647897 unclassified Candidatus Pelagibacter 0.00 1 1 S 1002672 Candidatus Pelagibacter sp. IMCC9063 0.00 2 0 O 1191478 Magnetococcales 0.00 2 0 F 1191479 Magnetococcaceae 0.00 2 0 G 162171 Magnetococcus 0.00 2 0 S 1124597 Magnetococcus marinus 0.00 2 2 S1 156889 Magnetococcus marinus MC-1 0.64 928 102 C 1236 Gammaproteobacteria 0.25 362 28 O 91347 Enterobacterales 0.19 277 74 F 543 Enterobacteriaceae 0.03 48 0 G 590 Salmonella 0.03 48 0 S 28901 Salmonella enterica 0.03 48 4 S1 59201 Salmonella enterica subsp. enterica 0.01 18 18 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.01 16 16 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.00 4 4 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.00 3 3 S2 58712 Salmonella enterica subsp. enterica serovar Anatum 0.00 1 1 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 1 1 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.00 1 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.00 1 1 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.03 44 0 F1 2890311 Klebsiella/Raoultella group 0.03 38 0 G 570 Klebsiella 0.02 36 16 S 573 Klebsiella pneumoniae 0.01 20 10 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.01 10 10 S2 1094170 Klebsiella pneumoniae subsp. pneumoniae KPNIH10 0.00 1 0 S 244366 Klebsiella variicola 0.00 1 1 S1 640131 Klebsiella variicola At-22 0.00 1 1 S 1134687 Klebsiella michiganensis 0.00 6 0 G 160674 Raoultella 0.00 6 0 G1 2627600 unclassified Raoultella 0.00 6 6 S 2799495 Raoultella sp. XY-1 0.02 36 0 G 561 Escherichia 0.02 36 34 S 562 Escherichia coli 0.00 2 2 S1 655817 Escherichia coli ABU 83972 0.02 31 0 F1 191675 Enterobacteriaceae incertae sedis 0.02 31 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.02 27 0 F3 84564 ant endosymbionts 0.02 27 0 G 203804 Candidatus Blochmanniella 0.02 27 25 G1 711328 unclassified Candidatus Blochmanniella 0.00 2 2 S 2681987 Blochmannia endosymbiont of Colobopsis nipponica 0.00 3 0 F3 146507 aphid secondary symbionts 0.00 2 0 G 568988 Candidatus Regiella 0.00 2 0 G1 3077955 unclassified Candidatus Regiella 0.00 2 2 S 3077956 Candidatus Regiella endosymbiont of Tuberolachnus salignus 0.00 1 1 G 568987 Candidatus Hamiltonella 0.00 1 0 F3 199891 mealybug secondary endosymbionts 0.00 1 1 S 1835721 secondary endosymbiont of Trabutina mannipara 0.02 24 0 F1 36866 unclassified Enterobacteriaceae 0.02 23 23 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.00 1 1 S 2675780 Enterobacteriaceae endosymbiont of Donacia piscatrix 0.01 9 0 G 544 Citrobacter 0.01 9 0 G1 1344959 Citrobacter freundii complex 0.01 8 8 S 67827 Citrobacter werkmanii 0.00 1 0 G2 2816438 unclassified Citrobacter freundii complex 0.00 1 1 S 2077149 Citrobacter freundii complex sp. CFNIH9 0.00 6 0 G 547 Enterobacter 0.00 3 0 G1 354276 Enterobacter cloacae complex 0.00 2 2 S 299767 Enterobacter ludwigii 0.00 1 1 S 208224 Enterobacter kobei 0.00 3 0 G1 2608935 unclassified Enterobacter 0.00 2 2 S 2870346 Enterobacter sp. C2 0.00 1 1 S 2724468 Enterobacter sp. JUb54 0.00 3 3 G 401618 Candidatus Riesia 0.00 2 0 G 1081630 Candidatus Schneideria 0.00 2 2 S 1081631 Candidatus Schneideria nysicola 0.02 23 7 F 1903414 Morganellaceae 0.00 5 0 G 581 Morganella 0.00 5 5 S 582 Morganella morganii 0.00 5 1 G 583 Proteus 0.00 3 3 S 584 Proteus mirabilis 0.00 1 1 S 2050967 Proteus faecis 0.00 5 0 G 637 Arsenophonus 0.00 2 2 S 638 Arsenophonus nasoniae 0.00 2 0 G1 2627083 unclassified Arsenophonus 0.00 1 1 S 634121 Arsenophonus symbiont of Ornithomya chloropus 0.00 1 1 S 1231049 Arsenophonus endosymbiont of Aphis craccivora 0.00 1 1 S 634113 Candidatus Arsenophonus lipoptenae 0.00 1 0 G 586 Providencia 0.00 1 1 S 1715285 Candidatus Providencia siddallii 0.01 14 0 F 2812006 Bruguierivoracaceae 0.01 14 0 G 84565 Sodalis 0.01 13 13 S 2697027 Sodalis ligni 0.00 1 0 S 1486991 Candidatus Sodalis pierantonius 0.00 1 1 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.00 7 0 F 1903410 Pectobacteriaceae 0.00 4 1 G 122277 Pectobacterium 0.00 2 2 S 180957 Pectobacterium brasiliense 0.00 1 1 S 78398 Pectobacterium odoriferum 0.00 2 0 G 1082702 Lonsdalea 0.00 2 2 S 1172565 Lonsdalea populi 0.00 1 0 G 204037 Dickeya 0.00 1 1 S 1089444 Dickeya solani 0.00 7 1 F 1903411 Yersiniaceae 0.00 4 4 G 1927833 Candidatus Fukatsuia 0.00 1 0 G 613 Serratia 0.00 1 1 S 138074 Serratia symbiotica 0.00 1 0 G 629 Yersinia 0.00 1 0 G1 1649845 Yersinia pseudotuberculosis complex 0.00 1 0 S 632 Yersinia pestis 0.00 1 1 S1 748678 Yersinia pestis str. Pestoides B 0.00 6 0 F 1903409 Erwiniaceae 0.00 5 0 G 32199 Buchnera 0.00 5 1 S 9 Buchnera aphidicola 0.00 3 3 S1 1241868 Buchnera aphidicola (Mollitrichosiphum nigrofasciatum) 0.00 1 1 S1 1878935 Buchnera aphidicola (Cinara confinis) 0.00 1 0 G 551 Erwinia 0.00 1 1 S 1922217 Candidatus Erwinia haradaeae 0.15 223 6 O 72274 Pseudomonadales 0.11 154 4 F 135621 Pseudomonadaceae 0.07 98 25 G 286 Pseudomonas 0.02 30 0 G1 136841 Pseudomonas aeruginosa group 0.02 29 29 S 287 Pseudomonas aeruginosa 0.00 1 1 S 53408 Pseudomonas citronellolis 0.02 23 2 G1 196821 unclassified Pseudomonas 0.01 11 11 S 2762896 Pseudomonas sp. MPDS 0.00 6 6 S 2895472 Pseudomonas sp. B21-012 0.00 1 1 S 2954088 Pseudomonas sp. FP2262 0.00 1 1 S 1981174 Pseudomonas sp. M30-35 0.00 1 1 S 3020843 Pseudomonas sp. Q1-7 0.00 1 1 S 3002903 Pseudomonas sp. BSw22131 0.01 8 8 S 437900 Pseudomonas marincola 0.00 5 0 G1 136845 Pseudomonas putida group 0.00 5 5 S 78327 Pseudomonas mosselii 0.00 3 0 G1 136843 Pseudomonas fluorescens group 0.00 1 1 S 47878 Pseudomonas azotoformans 0.00 1 0 S 47883 Pseudomonas synxantha 0.00 1 1 S1 96901 Pseudomonas synxantha BG33R 0.00 1 1 S 200452 Pseudomonas congelans 0.00 1 1 S 489632 Pseudomonas chengduensis 0.00 1 1 S 2961893 Pseudomonas triclosanedens 0.00 1 1 G1 136842 Pseudomonas chlororaphis group 0.00 1 1 S 3136738 Pseudomonas helvetica 0.03 50 0 G 1654787 Thiopseudomonas 0.03 50 50 S 1697053 Thiopseudomonas alkaliphila 0.00 1 0 F1 351 Azotobacter group 0.00 1 1 G 352 Azotobacter 0.00 1 0 G 2901189 Halopseudomonas 0.00 1 1 S 797277 Halopseudomonas litoralis 0.04 62 0 F 2887365 Marinobacteraceae 0.04 62 62 G 2742 Marinobacter 0.00 1 0 F 3085096 Ketobacteraceae 0.00 1 0 G 2025617 Ketobacter 0.00 1 1 S 1917421 Ketobacter alkanivorans 0.03 48 1 O 135614 Lysobacterales 0.03 41 6 F 32033 Lysobacteraceae 0.01 17 0 G 338 Xanthomonas 0.01 16 16 S 29447 Xanthomonas albilineans 0.00 1 0 G1 643453 Xanthomonas citri group 0.00 1 1 S 346 Xanthomonas citri 0.01 10 8 G 68 Lysobacter 0.00 1 1 S 453783 Lysobacter soli 0.00 1 1 S 2591633 Lysobacter alkalisoli 0.00 4 3 G 40323 Stenotrophomonas 0.00 1 1 S 3003271 Stenotrophomonas oahuensis 0.00 3 0 G 2709666 Pseudolysobacter 0.00 3 3 S 2511995 Pseudolysobacter antarcticus 0.00 1 0 G 2370 Xylella 0.00 1 0 S 2371 Xylella fastidiosa 0.00 1 1 S1 698414 Xylella fastidiosa subsp. pauca 0.00 6 5 F 1775411 Rhodanobacteraceae 0.00 1 0 G 70411 Frateuria 0.00 1 0 S 81475 Frateuria aurantia 0.00 1 1 S1 767434 Frateuria aurantia DSM 6220 0.02 33 0 O 135619 Oceanospirillales 0.01 13 0 F 135620 Oceanospirillaceae 0.00 6 0 G 267849 Nitrincola 0.00 6 6 S 2614693 Nitrincola iocasae 0.00 6 0 G 3018276 Aliamphritea 0.00 6 6 S 1524258 Aliamphritea ceti 0.00 1 0 G 75687 Neptunomonas 0.00 1 0 S 417574 Neptunomonas japonica 0.00 1 1 S1 1441457 Neptunomonas japonica JAMM 1380 0.01 9 3 F 28256 Halomonadaceae 0.00 5 0 F1 114403 Zymobacter group 0.00 3 0 G 33073 Zymobacter 0.00 3 3 S 33074 Zymobacter palmae 0.00 2 0 G 235572 Candidatus Portiera 0.00 2 2 S 91844 Candidatus Portiera aleyrodidarum 0.00 1 0 G 2745 Halomonas 0.00 1 1 S 2733488 Halomonas sulfidivorans 0.00 5 0 F 224379 Hahellaceae 0.00 5 5 G 158481 Hahella 0.00 4 0 F 2066474 Endozoicomonadaceae 0.00 4 4 G 305899 Endozoicomonas 0.00 1 0 F 224372 Alcanivoracaceae 0.00 1 1 G 59753 Alcanivorax 0.00 1 0 F 2823145 Pleioneaceae 0.00 1 0 G 1502941 Pleionea 0.00 1 1 S 3070815 Pleionea litopenaei 0.02 22 0 O 135623 Vibrionales 0.02 22 7 F 641 Vibrionaceae 0.01 15 4 G 662 Vibrio 0.00 7 7 S 666 Vibrio cholerae 0.00 4 3 G1 2614977 unclassified Vibrio 0.00 1 1 S 2661921 Vibrio sp. THAF191c 0.02 22 1 O 135622 Alteromonadales 0.01 16 2 F 72275 Alteromonadaceae 0.01 11 0 G 1751872 Lacimicrobium 0.01 11 11 S 1526571 Lacimicrobium alkaliphilum 0.00 1 1 G 1172191 Catenovulum 0.00 1 0 F1 2903219 Alteromonas/Salinimonas group 0.00 1 0 G 226 Alteromonas 0.00 1 1 S 589873 Alteromonas australica 0.00 1 0 G 2905123 Paraneptunicella 0.00 1 1 S 2831148 Paraneptunicella aestuarii 0.00 2 1 F 267890 Shewanellaceae 0.00 1 0 G 22 Shewanella 0.00 1 1 S 62322 Shewanella baltica 0.00 1 0 F 267888 Pseudoalteromonadaceae 0.00 1 0 G 53246 Pseudoalteromonas 0.00 1 0 S 247523 Pseudoalteromonas aliena 0.00 1 1 S1 1314866 Pseudoalteromonas aliena SW19 0.00 1 0 F 267891 Moritellaceae 0.00 1 0 G 58050 Moritella 0.00 1 0 S 90736 Moritella marina 0.00 1 1 S1 1202962 Moritella marina ATCC 15381 0.00 1 0 F 267893 Idiomarinaceae 0.00 1 1 G 135575 Idiomarina 0.01 17 0 O 1706369 Cellvibrionales 0.01 12 0 F 1706371 Cellvibrionaceae 0.01 11 6 G 447467 Simiduia 0.00 4 0 G1 2639280 unclassified Simiduia 0.00 4 4 S 2909669 Simiduia sp. 21SJ11W-1 0.00 1 0 S 447471 Simiduia agarivorans 0.00 1 1 S1 1117647 Simiduia agarivorans SA1 = DSM 21679 0.00 1 0 G 10 Cellvibrio 0.00 1 1 G1 2624793 unclassified Cellvibrio 0.00 2 1 F 1706372 Halieaceae 0.00 1 0 G 393661 Congregibacter 0.00 1 0 S 393662 Congregibacter litoralis 0.00 1 1 S1 314285 Congregibacter litoralis KT71 0.00 2 0 F 1706375 Spongiibacteraceae 0.00 1 0 G 630749 Spongiibacter 0.00 1 1 S 1748242 Spongiibacter taiwanensis 0.00 1 0 G 1084558 Oceanicoccus 0.00 1 1 S 716816 Oceanicoccus sagamiensis 0.00 1 0 F 1706373 Microbulbiferaceae 0.00 1 0 G 48073 Microbulbifer 0.00 1 1 S 86173 Microbulbifer elongatus 0.01 17 0 O 135613 Chromatiales 0.01 16 0 F 1046 Chromatiaceae 0.01 9 0 G 2828366 Caldichromatium 0.01 9 9 S 2699430 Caldichromatium japonicum 0.00 3 0 G 156885 Thioflavicoccus 0.00 3 0 S 80679 Thioflavicoccus mobilis 0.00 3 3 S1 765912 Thioflavicoccus mobilis 8321 0.00 2 0 G 85072 Allochromatium 0.00 2 2 S 553982 Allochromatium tepidum 0.00 1 1 G 1056 Thiocapsa 0.00 1 0 G 85073 Thermochromatium 0.00 1 0 S 1050 Thermochromatium tepidum 0.00 1 1 S1 316276 Thermochromatium tepidum ATCC 43061 0.00 1 0 F 72276 Ectothiorhodospiraceae 0.00 1 0 G 106633 Thioalkalivibrio 0.00 1 0 G1 2621013 unclassified Thioalkalivibrio 0.00 1 1 S 396595 Thioalkalivibrio sp. K90mix 0.01 16 0 O 135618 Methylococcales 0.01 16 1 F 403 Methylococcaceae 0.00 7 0 G 1808977 Candidatus Methylospira 0.00 7 7 S 1808979 Candidatus Methylospira mobilis 0.00 5 0 G 1295378 Methylogaea 0.00 5 5 S 1295382 Methylogaea oryzae 0.00 1 1 G 413 Methylococcus 0.00 1 0 G 429 Methylobacter 0.00 1 0 G1 2635283 unclassified Methylobacter 0.00 1 1 S 2911520 Methylobacter sp. YRD-M1 0.00 1 0 G 762296 Methylovulum 0.00 1 1 S 1704499 Methylovulum psychrotolerans 0.01 13 0 O 135624 Aeromonadales 0.01 13 0 F 84642 Aeromonadaceae 0.00 7 5 G 642 Aeromonas 0.00 1 1 S 645 Aeromonas salmonicida 0.00 1 1 S 654 Aeromonas veronii 0.00 4 0 G 225143 Oceanisphaera 0.00 4 4 S 1903694 Oceanisphaera avium 0.00 1 0 G 43947 Tolumonas 0.00 1 0 G1 263764 environmental samples 0.00 1 1 S 263765 uncultured Tolumonas sp. 0.00 1 0 G 2802288 Dongshaea 0.00 1 1 S 2047966 Dongshaea marina 0.01 11 0 O 135615 Cardiobacteriales 0.01 10 6 F 868 Cardiobacteriaceae 0.00 2 0 G 13275 Suttonella 0.00 2 0 G1 2908647 unclassified Suttonella 0.00 2 2 S 2908648 Suttonella sp. R2A3 0.00 1 0 G 869 Dichelobacter 0.00 1 1 S 870 Dichelobacter nodosus 0.00 1 1 G 2717 Cardiobacterium 0.00 1 0 F 3018589 Ignatzschineriaceae 0.00 1 0 G 112008 Ignatzschineria 0.00 1 0 S 112009 Ignatzschineria larvae 0.00 1 1 S1 1111732 Ignatzschineria larvae DSM 13226 0.01 11 0 O 2887326 Moraxellales 0.01 11 0 F 468 Moraxellaceae 0.00 6 3 G 469 Acinetobacter 0.00 2 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.00 2 2 S 470 Acinetobacter baumannii 0.00 1 1 S 29430 Acinetobacter haemolyticus 0.00 5 1 G 475 Moraxella 0.00 4 4 S 90241 Moraxella lincolnii 0.01 10 0 O 1240482 Orbales 0.01 10 2 F 1240483 Orbaceae 0.00 5 0 G 2894762 Zophobihabitans 0.00 5 5 S 1635327 Zophobihabitans entericus 0.00 3 0 G 1335631 Frischella 0.00 3 3 S 1267021 Frischella perrara 0.00 7 0 O 72273 Thiotrichales 0.00 5 0 F 135617 Thiotrichaceae 0.00 5 5 G 1030 Thiothrix 0.00 2 0 F 135616 Piscirickettsiaceae 0.00 1 0 G 1237 Piscirickettsia 0.00 1 1 S 1238 Piscirickettsia salmonis 0.00 1 1 G 2039723 Thiomicrorhabdus 0.00 4 0 C1 118884 Gammaproteobacteria incertae sedis 0.00 4 0 G 1076625 Candidatus Steffania 0.00 4 4 S 1076626 Candidatus Steffania adelgidicola 0.00 3 0 O 118969 Legionellales 0.00 2 0 F 118968 Coxiellaceae 0.00 2 0 G 254245 Aquicella 0.00 1 1 S 254246 Aquicella lusitana 0.00 1 1 S 254247 Aquicella siphonis 0.00 1 1 F 444 Legionellaceae 0.00 2 0 O 135625 Pasteurellales 0.00 2 2 F 712 Pasteurellaceae 0.00 2 0 O 3085109 Thiohalobacterales 0.00 2 0 F 3085110 Thiohalobacteraceae 0.00 2 1 G 1273155 Thiohalobacter 0.00 1 0 G1 2631224 unclassified Thiohalobacter 0.00 1 1 S 3057176 Thiohalobacter sp. IOR34 0.00 2 0 O 2887327 Kangiellales 0.00 2 0 F 1920240 Kangiellaceae 0.00 2 2 G 261963 Kangiella 0.00 1 0 O 2975284 Candidatus Comchoanobacterales 0.00 1 0 F 2975285 Candidatus Comchoanobacteraceae 0.00 1 0 G 2975286 Candidatus Comchoanobacter 0.00 1 1 S 2919598 Candidatus Comchoanobacter bicostacola 0.08 123 9 C 28216 Betaproteobacteria 0.07 102 4 O 80840 Burkholderiales 0.05 69 4 F 80864 Comamonadaceae 0.03 40 1 G 283 Comamonas 0.03 37 37 S 1082851 Comamonas serinivorans 0.00 1 1 S 2743470 Comamonas antarctica 0.00 1 1 S 2949090 Comamonas endophytica 0.01 11 11 G 80865 Delftia 0.00 6 0 G 219181 Ottowia 0.00 6 0 G1 2645081 unclassified Ottowia 0.00 6 6 S 1658672 Ottowia sp. oral taxon 894 0.00 4 3 G 238749 Diaphorobacter 0.00 1 1 S 3036128 Diaphorobacter limosus 0.00 3 0 G 232523 Hylemonella 0.00 3 3 S 80880 Hylemonella gracilis 0.00 1 0 G 47420 Hydrogenophaga 0.00 1 1 G1 2610897 unclassified Hydrogenophaga 0.01 13 2 F 119060 Burkholderiaceae 0.00 7 0 G 32008 Burkholderia 0.00 7 0 G1 87882 Burkholderia cepacia complex 0.00 3 3 S 87883 Burkholderia multivorans 0.00 1 1 S 95486 Burkholderia cenocepacia 0.00 1 0 S 152500 Burkholderia dolosa 0.00 1 1 S1 1385930 Burkholderia dolosa PC543 0.00 1 1 S 292 Burkholderia cepacia 0.00 1 1 S 488447 Burkholderia contaminans 0.00 3 0 G 48736 Ralstonia 0.00 3 0 G1 3116862 Ralstonia solanacearum species complex 0.00 3 3 S 305 Ralstonia solanacearum 0.00 1 0 G 1822464 Paraburkholderia 0.00 1 1 S 2547399 Paraburkholderia pallida 0.00 6 0 F 2975441 Sphaerotilaceae 0.00 4 4 G 93681 Roseateles 0.00 1 0 G 34102 Sphaerotilus 0.00 1 1 S 639200 Sphaerotilus sulfidivorans 0.00 1 0 G 196013 Caldimonas 0.00 1 1 S 376175 Schlegelella aquatica 0.00 5 2 F 75682 Oxalobacteraceae 0.00 3 0 F1 2895353 Telluria group 0.00 3 2 G 149698 Massilia 0.00 1 0 G1 2609279 unclassified Massilia 0.00 1 1 S 1707785 Massilia sp. WG5 0.00 2 0 F 506 Alcaligenaceae 0.00 1 0 G 90243 Oligella 0.00 1 1 S 90244 Oligella ureolytica 0.00 1 0 G 152267 Pigmentiphaga 0.00 1 1 S 1940612 Pigmentiphaga aceris 0.00 2 2 F 995019 Sutterellaceae 0.00 1 0 O1 224471 Burkholderiales genera incertae sedis 0.00 1 0 G 32012 Thiomonas 0.00 1 0 G1 2625466 unclassified Thiomonas 0.00 1 1 S 1050370 Thiomonas sp. X19 0.00 7 1 O 32003 Nitrosomonadales 0.00 3 0 F 206379 Nitrosomonadaceae 0.00 3 3 G 914 Nitrosomonas 0.00 1 0 F 90627 Gallionellaceae 0.00 1 0 G 96 Gallionella 0.00 1 0 S 370405 Gallionella capsiferriformans 0.00 1 1 S1 395494 Gallionella capsiferriformans ES-2 0.00 1 0 F 2008793 Sterolibacteriaceae 0.00 1 0 G 1914449 Rugosibacter 0.00 1 1 S 1565605 Rugosibacter aromaticivorans 0.00 1 0 F 2772226 Sulfuricellaceae 0.00 1 0 G 1778653 Sulfuriferula 0.00 1 0 G1 2637784 unclassified Sulfuriferula 0.00 1 1 S 1985873 Sulfuriferula sp. AH1 0.00 4 1 O 206351 Neisseriales 0.00 1 0 F 481 Neisseriaceae 0.00 1 0 G 482 Neisseria 0.00 1 0 G1 2623750 unclassified Neisseria 0.00 1 1 S 2912675 Neisseria sp. Dent CA1/247 0.00 1 0 F 1499392 Chromobacteriaceae 0.00 1 0 G 535 Chromobacterium 0.00 1 1 S 1778675 Chromobacterium rhizoryzae 0.00 1 0 F 2897177 Chitinibacteraceae 0.00 1 0 G 885864 Jeongeupia 0.00 1 1 G1 2619593 unclassified Jeongeupia 0.00 1 0 O 206389 Rhodocyclales 0.00 1 0 F 2008794 Zoogloeaceae 0.00 1 0 G 2891294 Nitrogeniibacter 0.00 1 1 S 2815343 Nitrogeniibacter aestuarii 0.01 16 0 D1 1783270 FCB group 0.01 16 0 D2 68336 Bacteroidota/Chlorobiota group 0.01 16 0 P 976 Bacteroidota 0.00 7 0 C 200643 Bacteroidia 0.00 7 1 O 171549 Bacteroidales 0.00 5 0 F 815 Bacteroidaceae 0.00 5 0 G 816 Bacteroides 0.00 5 5 S 817 Bacteroides fragilis 0.00 1 0 F 2005520 Dysgonomonadaceae 0.00 1 0 G 156973 Dysgonomonas 0.00 1 1 S 45254 Dysgonomonas capnocytophagoides 0.00 5 0 C 768503 Cytophagia 0.00 5 0 O 768507 Cytophagales 0.00 3 0 F 2896860 Spirosomataceae 0.00 2 0 G 332157 Larkinella 0.00 2 2 S 332158 Larkinella insperata 0.00 1 0 G 105 Runella 0.00 1 0 G1 2631759 unclassified Runella 0.00 1 1 S 2268026 Runella sp. SP2 0.00 1 0 F 89373 Cytophagaceae 0.00 1 0 G 107 Spirosoma 0.00 1 1 S 2666025 Spirosoma endbachense 0.00 1 0 F 1853232 Hymenobacteraceae 0.00 1 0 G 89966 Hymenobacter 0.00 1 0 G1 2615202 unclassified Hymenobacter 0.00 1 1 S 1385664 Hymenobacter sp. DG25B 0.00 3 0 C 117743 Flavobacteriia 0.00 3 0 O 200644 Flavobacteriales 0.00 3 0 F 2762318 Weeksellaceae 0.00 2 0 F1 2782232 Chryseobacterium group 0.00 2 0 G 59732 Chryseobacterium 0.00 2 0 G1 2593645 unclassified Chryseobacterium 0.00 1 1 S 2864040 Chryseobacterium sp. LJ668 0.00 1 1 S 878220 Chryseobacterium sp. StRB126 0.00 1 0 G 501783 Cloacibacterium 0.00 1 1 S 2004710 Cloacibacterium caeni 0.00 1 0 C 1853228 Chitinophagia 0.00 1 0 O 1853229 Chitinophagales 0.00 1 0 F 563835 Chitinophagaceae 0.00 1 0 G 79328 Chitinophaga 0.00 1 1 S 2029983 Chitinophaga caeni 0.00 4 0 P 200940 Thermodesulfobacteriota 0.00 3 0 C 3031651 Desulfuromonadia 0.00 2 0 O 3031668 Geobacterales 0.00 2 0 F 213422 Geobacteraceae 0.00 2 1 G 28231 Geobacter 0.00 1 0 G1 2627627 unclassified Geobacter 0.00 1 1 S 2597769 Geobacter sp. FeAm09 0.00 1 0 O 69541 Desulfuromonadales 0.00 1 0 F 213421 Desulfuromonadaceae 0.00 1 0 G 890 Desulfuromonas 0.00 1 1 S 2802975 Desulfuromonas versatilis 0.00 1 0 C 67799 Thermodesulfobacteria 0.00 1 1 O 188710 Thermodesulfobacteriales 0.00 1 0 D1 2323 Bacteria incertae sedis 0.00 1 0 D2 1783234 Bacteria candidate phyla 0.00 1 0 P 95818 Candidatus Saccharibacteria 0.00 1 0 C 2093818 Candidatus Saccharimonadia 0.00 1 0 O 2093819 Candidatus Nanosynbacterales 0.00 1 0 F 2093822 Candidatus Nanosynbacteraceae 0.00 1 1 G 2093823 Candidatus Nanosynbacter 0.00 1 0 P 29547 Campylobacterota 0.00 1 0 C 3031852 Epsilonproteobacteria 0.00 1 0 O 213849 Campylobacterales 0.00 1 0 F 72293 Helicobacteraceae 0.00 1 0 G 209 Helicobacter 0.00 1 1 S 135569 Helicobacter apodemus 0.00 1 0 D1 1783257 PVC group 0.00 1 0 P 74201 Verrucomicrobiota 0.00 1 0 C 203494 Verrucomicrobiia 0.00 1 0 O 48461 Verrucomicrobiales 0.00 1 0 F 203557 Verrucomicrobiaceae 0.00 1 0 G 518753 Luteolibacter 0.00 1 0 G1 2637149 unclassified Luteolibacter 0.00 1 1 S 2995170 Luteolibacter sp. SL250