0.08 261 261 U 0 unclassified 99.92 323706 0 R 1 root 99.92 323706 0 R1 131567 cellular organisms 99.92 323706 358 D 2 Bacteria 56.48 182963 101 D1 1783272 Terrabacteria group 51.62 167242 186 P 1239 Bacillota 51.39 166484 16525 C 91061 Bacilli 30.32 98242 5100 O 1385 Bacillales 15.09 48872 715 F 186817 Bacillaceae 13.81 44746 1108 G 1386 Bacillus 9.32 30198 1008 G1 653685 Bacillus subtilis group 6.34 20541 20 G2 1938374 Bacillus amyloliquefaciens group 5.94 19232 18931 S 492670 Bacillus velezensis 0.09 301 301 S1 1385727 Bacillus velezensis NAU-B3 0.40 1289 1275 S 1390 Bacillus amyloliquefaciens 0.00 14 14 S1 1292358 Bacillus amyloliquefaciens KHG19 2.60 8412 7668 S 1423 Bacillus subtilis 0.17 540 473 S1 135461 Bacillus subtilis subsp. subtilis 0.02 59 59 S2 1302650 Bacillus subtilis subsp. subtilis str. BAB-1 0.00 8 8 S2 224308 Bacillus subtilis subsp. subtilis str. 168 0.06 204 204 S1 86029 Bacillus subtilis subsp. natto 0.03 100 100 S 1648923 Bacillus paralicheniformis 0.02 53 53 S 1452 Bacillus atrophaeus 0.01 37 0 G2 653388 Bacillus mojavensis subgroup 0.01 37 37 S 260554 Bacillus halotolerans 0.01 33 33 S 483913 Bacillus inaquosorum 0.00 13 13 S 1402 Bacillus licheniformis 0.00 1 1 S 96241 Bacillus spizizenii 1.57 5094 5094 S 561879 Bacillus safensis 1.38 4478 61 G1 86661 Bacillus cereus group 0.53 1714 1674 S 1396 Bacillus cereus 0.01 19 19 S1 1454382 Bacillus cereus D17 0.00 12 12 S1 1003239 Bacillus cereus C1L 0.00 7 7 S1 572264 Bacillus cereus 03BB102 0.00 2 2 S1 288681 Bacillus cereus E33L 0.51 1657 1604 S 1428 Bacillus thuringiensis 0.01 43 0 S1 29339 Bacillus thuringiensis serovar kurstaki 0.01 43 43 S2 1261129 Bacillus thuringiensis serovar kurstaki str. HD-1 0.00 7 7 S1 1217737 Bacillus thuringiensis HD-789 0.00 2 2 S1 412694 Bacillus thuringiensis str. Al Hakam 0.00 1 1 S1 1423143 Bacillus thuringiensis Bt18247 0.19 603 603 S 1392 Bacillus anthracis 0.10 326 326 S 64104 Bacillus pseudomycoides 0.02 66 66 S 2026186 Bacillus paranthracis 0.01 31 13 S 1405 Bacillus mycoides 0.01 18 18 S1 315730 Bacillus mycoides KBAB4 0.00 13 0 G2 2750818 unclassified Bacillus cereus group 0.00 13 13 S 1892404 Bacillus sp. ABP14 0.00 5 5 S 2026191 Bacillus luti 0.00 2 2 S 155322 Bacillus toyonensis 0.75 2416 0 G1 1792192 Bacillus altitudinis complex 0.75 2416 2416 S 293387 Bacillus altitudinis 0.39 1274 1 G1 185979 unclassified Bacillus (in: firmicutes) 0.17 537 537 S 2841656 Bacillus sp. ZHX3 0.13 422 422 S 467262 Bacillus sp. T3 0.04 137 137 S 666686 Bacillus sp. 1NLA3E 0.02 78 78 S 3077323 Bacillus sp. SI2 0.02 73 73 S 2709784 Bacillus sp. KH172YL63 0.01 19 19 S 2874284 Bacillus sp. CRB-7 0.00 4 4 S 1806216 Bacillus sp. RZ2MS9 0.00 2 2 S 2884834 Bacillus sp. CMF12 0.00 1 1 S 3229854 Bacillus sp. Bos-x628 0.05 177 177 S 1408 Bacillus pumilus 0.00 1 1 S 1983719 Bacillus shivajii 0.37 1205 0 G 2675230 Cytobacillus 0.22 705 705 S 665099 Cytobacillus oceanisediminis 0.15 490 490 S 1399 Cytobacillus firmus 0.00 10 10 S 3051614 Cytobacillus pseudoceanisediminis 0.21 687 36 G 2837504 Heyndrickxia 0.20 651 646 S 1398 Heyndrickxia coagulans 0.00 5 5 S1 345219 Heyndrickxia coagulans 36D1 0.17 556 0 G 2800373 Priestia 0.16 518 515 S 1404 Priestia megaterium 0.00 3 3 S1 1006007 Priestia megaterium WSH-002 0.01 38 38 S 412384 Priestia aryabhattai 0.05 169 27 G 400634 Lysinibacillus 0.02 63 0 G1 2636778 unclassified Lysinibacillus 0.02 63 63 S 2954544 Lysinibacillus sp. FSL W7-1291 0.01 39 28 S 1421 Lysinibacillus sphaericus 0.00 11 11 S1 444177 Lysinibacillus sphaericus C3-41 0.01 25 25 S 2086577 Lysinibacillus timonensis 0.00 14 14 S 2590012 Lysinibacillus agricola 0.00 1 1 S 1145276 Lysinibacillus varians 0.04 136 0 G 175304 Lentibacillus 0.04 124 0 G1 2614679 unclassified Lentibacillus 0.04 124 124 S 2518176 Lentibacillus sp. CBA3610 0.00 10 10 S 1472767 Lentibacillus amyloliquefaciens 0.00 2 2 S 2911514 Lentibacillus daqui 0.04 121 0 G 2675229 Peribacillus 0.03 101 101 S 264697 Peribacillus muralis 0.00 14 14 S 228899 Peribacillus asahii 0.00 5 5 S 1407 Peribacillus psychrosaccharolyticus 0.00 1 1 S 450367 Peribacillus frigoritolerans 0.02 68 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.02 68 0 S 86665 Halalkalibacterium halodurans 0.02 68 68 S1 272558 Halalkalibacterium halodurans C-125 0.02 66 59 G 182709 Oceanobacillus 0.00 6 6 S 2052660 Oceanobacillus zhaokaii 0.00 1 1 G1 2630292 unclassified Oceanobacillus 0.02 61 0 G 2685905 Salicibibacter 0.02 61 61 S 2743001 Salicibibacter cibi 0.02 57 56 G 2893057 Shouchella 0.00 1 0 S 300825 Shouchella lehensis 0.00 1 1 S1 1246626 Shouchella lehensis G1 0.02 50 17 G 129337 Geobacillus 0.01 24 3 S 33940 Geobacillus thermodenitrificans 0.01 21 21 S1 420246 Geobacillus thermodenitrificans NG80-2 0.00 4 0 G1 1505648 Geobacillus thermoleovorans group 0.00 4 4 S 33941 Geobacillus thermoleovorans 0.00 3 3 S 1921421 Geobacillus genomosp. 3 0.00 2 0 G1 2642459 unclassified Geobacillus 0.00 1 1 S 550542 Geobacillus sp. Y412MC52 0.00 1 1 S 1963025 Geobacillus sp. 46C-IIa 0.01 35 0 G 2837508 Rossellomorea 0.01 35 35 S 189381 Rossellomorea marisflavi 0.01 34 0 G 2005375 Alkalicoccus 0.01 34 34 S 1667239 Alkalicoccus halolimnae 0.01 28 0 G 45667 Halobacillus 0.01 24 24 S 45668 Halobacillus litoralis 0.00 4 4 S 2932258 Halobacillus shinanisalinarum 0.01 24 6 G 2675233 Metabacillus 0.00 14 14 S 1535204 Metabacillus endolithicus 0.00 3 2 G1 2675274 unclassified Metabacillus 0.00 1 1 S 2806989 Metabacillus sp. cB07 0.00 1 1 S 2567941 Metabacillus sediminilitoris 0.01 22 0 G 2675231 Mesobacillus 0.01 22 22 S 285983 Mesobacillus subterraneus 0.01 19 1 G 459532 Terribacillus 0.00 12 0 G1 2636508 unclassified Terribacillus 0.00 10 10 S 2850441 Terribacillus sp. DMT04 0.00 2 2 S 2921447 Terribacillus sp. FSL K6-0262 0.00 6 6 S 361277 Terribacillus saccharophilus 0.01 18 0 G 1494427 Tepidibacillus 0.01 18 18 S 3131995 Tepidibacillus marianensis 0.00 13 0 G 150247 Anoxybacillus 0.00 12 12 G1 2639704 unclassified Anoxybacillus 0.00 1 1 S 294699 Anoxybacillus amylolyticus 0.00 9 0 G 2785518 Radiobacillus 0.00 8 8 S 2594883 Radiobacillus deserti 0.00 1 1 S 2844358 Radiobacillus kanasensis 0.00 9 0 G 379065 Caldalkalibacillus 0.00 9 0 S 296745 Caldalkalibacillus thermarum 0.00 9 9 S1 986075 Caldalkalibacillus thermarum TA2.A1 0.00 6 0 G 2837506 Niallia 0.00 5 5 S 1397 Niallia circulans 0.00 1 0 G1 2837522 unclassified Niallia 0.00 1 1 S 3082444 Niallia sp. XMNu-256 0.00 3 0 G 351195 Salimicrobium 0.00 2 0 G1 2619739 unclassified Salimicrobium 0.00 2 2 S 3095364 Salimicrobium sp. PL1-032A 0.00 1 1 S 1230341 Salimicrobium jeotgali 0.00 3 0 G 1433999 Domibacillus 0.00 3 0 G1 2632383 unclassified Domibacillus 0.00 3 3 S 3077789 Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016 0.00 3 1 G 3033930 Fervidibacillus 0.00 2 2 S 2980026 Fervidibacillus albus 0.00 2 0 G 2837510 Siminovitchia 0.00 2 2 S 254758 Siminovitchia fortis 0.00 1 0 G 2893058 Pseudalkalibacillus 0.00 1 1 S 208199 Pseudalkalibacillus hwajinpoensis 0.00 1 0 G 2675232 Neobacillus 0.00 1 0 G1 2675272 unclassified Neobacillus 0.00 1 1 S 3070677 Neobacillus sp. PS3-12 0.00 1 0 G 2804231 Lederbergia 0.00 1 1 S 1467 Lederbergia lenta 0.00 1 0 G 289201 Pontibacillus 0.00 1 1 S 265426 Pontibacillus chungwhensis 0.00 1 0 G 1884449 Salipaludibacillus 0.00 1 0 G1 2635229 unclassified Salipaludibacillus 0.00 1 1 S 2924031 Salipaludibacillus sp. LMS25 0.00 1 0 G 1400133 Allobacillus 0.00 1 1 S 570278 Allobacillus halotolerans 0.00 1 0 G 2675234 Alkalihalobacillus 0.00 1 0 G1 2675276 unclassified Alkalihalobacillus 0.00 1 1 S 2924032 Alkalihalobacillus sp. LMS39 11.43 37037 16 F 90964 Staphylococcaceae 11.14 36088 249 G 1279 Staphylococcus 10.47 33920 33876 S 1280 Staphylococcus aureus 0.01 40 40 S1 1229492 Staphylococcus aureus 08BA02176 0.00 4 4 S1 548470 Staphylococcus aureus subsp. aureus MN8 0.33 1064 1064 S 70255 Staphylococcus condimenti 0.11 354 354 S 1290 Staphylococcus hominis 0.09 281 281 S 29378 Staphylococcus arlettae 0.02 70 70 S 985002 Staphylococcus argenteus 0.02 54 53 S 1282 Staphylococcus epidermidis 0.00 1 1 S1 176280 Staphylococcus epidermidis ATCC 12228 0.02 53 0 G1 2815305 Staphylococcus intermedius group 0.02 52 52 S 283734 Staphylococcus pseudintermedius 0.00 1 1 S 53344 Staphylococcus delphini 0.00 13 13 S 201828 Staphylococcus casei 0.00 9 9 S 28035 Staphylococcus lugdunensis 0.00 7 5 S 29388 Staphylococcus capitis 0.00 2 2 S1 74703 Staphylococcus capitis subsp. urealyticus 0.00 5 5 S 170573 Staphylococcus pettenkoferi 0.00 5 5 S 1283 Staphylococcus haemolyticus 0.00 1 1 S 3051183 Staphylococcus hsinchuensis 0.00 1 0 G1 91994 unclassified Staphylococcus 0.00 1 1 S 1715860 Staphylococcus sp. AntiMn-1 0.00 1 1 S 1292 Staphylococcus warneri 0.00 1 1 S 1286 Staphylococcus simulans 0.20 641 1 G 2803850 Mammaliicoccus 0.20 640 640 S 1296 Mammaliicoccus sciuri 0.08 273 0 G 45669 Salinicoccus 0.08 273 0 G1 2628837 unclassified Salinicoccus 0.08 273 273 S 3136731 Salinicoccus sp. Bachu38 0.00 13 0 G 3076173 Macrococcoides 0.00 13 13 S 69966 Macrococcoides caseolyticum 0.00 5 5 G 227979 Jeotgalicoccus 0.00 1 0 G 489909 Nosocomiicoccus 0.00 1 1 S 1232430 Nosocomiicoccus massiliensis 0.93 2999 3 F 186820 Listeriaceae 0.68 2193 79 G 1637 Listeria 0.33 1084 1084 S 1639 Listeria monocytogenes 0.27 865 0 G1 2642072 unclassified Listeria 0.27 865 865 S 1844999 Listeria sp. PSOL-1 0.05 149 0 S 1638 Listeria ivanovii 0.05 149 0 S1 202751 Listeria ivanovii subsp. ivanovii 0.05 149 149 S2 881621 Listeria ivanovii subsp. ivanovii PAM 55 0.00 10 10 S 1642 Listeria innocua 0.00 4 4 S 1006155 Listeria weihenstephanensis 0.00 1 1 S 1641 Listeria grayi 0.00 1 1 S 1497681 Listeria newyorkensis 0.25 803 0 G 2755 Brochothrix 0.25 803 803 S 2756 Brochothrix thermosphacta 0.80 2585 18 F 186822 Paenibacillaceae 0.39 1266 119 G 44249 Paenibacillus 0.13 409 404 S 1406 Paenibacillus polymyxa 0.00 5 5 S1 1413214 Paenibacillus polymyxa SQR-21 0.10 321 321 S 562959 Paenibacillus cellulositrophicus 0.04 145 145 S 2509456 Paenibacillus protaetiae 0.02 54 5 G1 185978 unclassified Paenibacillus 0.00 8 8 S 2921709 Paenibacillus sp. FSL W8-0186 0.00 8 8 S 2918901 Paenibacillus sp. MBLB1832 0.00 8 8 S 2211212 Paenibacillus sp. DCT19 0.00 8 8 S 2921361 Paenibacillus sp. FSL E2-0178 0.00 3 3 S 715179 Paenibacillus sp. sptzw28 0.00 3 3 S 2871175 Paenibacillus sp. DR312 0.00 3 3 S 2979727 Paenibacillus sp. KS-LC4 0.00 2 2 S 2921652 Paenibacillus sp. FSL R5-0636 0.00 2 2 S 2878915 Paenibacillus sp. YPG26 0.00 1 1 S 2921648 Paenibacillus sp. FSL R5-0519 0.00 1 1 S 2926710 Paenibacillus sp. CC-CFT742 0.00 1 1 S 2921677 Paenibacillus sp. FSL R7-0216 0.00 1 1 S 2954691 Paenibacillus sp. FSL R10-2734 0.02 52 52 S 682956 Paenibacillus jilunlii 0.01 45 45 S 2565926 Paenibacillus algicola 0.01 26 26 S 61624 Paenibacillus mucilaginosus 0.01 19 19 S 79263 Paenibacillus chitinolyticus 0.00 14 14 S 253703 Paenibacillus antarcticus 0.00 10 10 S 2704463 Paenibacillus rhizovicinus 0.00 8 8 S 1333845 Paenibacillus sophorae 0.00 8 8 S 1178515 Paenibacillus swuensis 0.00 7 7 S 1778678 Paenibacillus psychroresistens 0.00 5 5 S 1462996 Paenibacillus yonginensis 0.00 4 4 G1 2044880 Paenibacillus sonchi group 0.00 4 4 S 1619311 Paenibacillus physcomitrellae 0.00 3 3 S 44252 Paenibacillus macerans 0.00 2 2 S 1464 Paenibacillus larvae 0.00 2 2 S 528191 Paenibacillus xylanexedens 0.00 2 2 S 49283 Paenibacillus thiaminolyticus 0.00 1 1 S 1451 Paenibacillus amylolyticus 0.00 1 1 S 2918900 Paenibacillus aurantius 0.00 1 1 S 130049 Paenibacillus dendritiformis 0.00 1 1 S 2020716 Paenibacillus konkukensis 0.00 1 1 S 3050112 Paenibacillus polygoni 0.00 1 1 S 1873425 Paenibacillus tritici 0.00 1 1 S 375489 Paenibacillus cellulosilyticus 0.27 863 1 G 329857 Cohnella 0.21 686 686 S 2674991 Cohnella candidum 0.05 176 176 S 2507935 Cohnella abietis 0.13 425 0 F1 85151 Aneurinibacillus group 0.13 425 86 G 55079 Aneurinibacillus 0.10 321 321 S 1500254 Aneurinibacillus soli 0.01 18 0 G1 2642329 unclassified Aneurinibacillus 0.01 18 18 S 3022697 Aneurinibacillus sp. Ricciae_BoGa-3 0.00 10 1 G 55080 Brevibacillus 0.00 5 5 S 45462 Brevibacillus borstelensis 0.00 4 4 S 1465 Brevibacillus laterosporus 0.00 3 0 G 456492 Saccharibacillus 0.00 3 3 S 2583377 Saccharibacillus brassicae 0.23 735 6 F 186818 Planococcaceae 0.17 543 43 G 160795 Ureibacillus 0.12 403 403 S 367743 Ureibacillus thermophilus 0.03 97 97 S 51173 Ureibacillus thermosphaericus 0.02 65 0 G 889388 Chryseomicrobium 0.02 65 0 G1 2625558 unclassified Chryseomicrobium 0.02 65 65 S 2921704 Chryseomicrobium sp. FSL W7-1435 0.02 55 0 G 651660 Paenisporosarcina 0.02 52 52 S 2320858 Paenisporosarcina cavernae 0.00 3 3 S 417367 Paenisporosarcina antarctica 0.01 35 35 G 1569 Sporosarcina 0.01 26 1 G 1372 Planococcus 0.01 25 0 G1 2662419 unclassified Planococcus (in: firmicutes) 0.01 25 25 S 2058136 Planococcus sp. MB-3u-03 0.00 4 0 G 1649 Kurthia 0.00 2 2 S 1650 Kurthia zopfii 0.00 2 0 G1 2644826 unclassified Kurthia 0.00 2 2 S 1750719 Kurthia sp. 11kri321 0.00 1 0 G 648800 Solibacillus 0.00 1 0 S 76853 Solibacillus silvestris 0.00 1 1 S1 1002809 Solibacillus silvestris StLB046 0.23 729 0 F 186823 Alicyclobacillaceae 0.22 727 3 G 29330 Alicyclobacillus 0.22 724 724 S 2931921 Alicyclobacillus mengziensis 0.00 1 0 G 432330 Tumebacillus 0.00 1 1 S 1903704 Tumebacillus avium 0.00 1 0 G 3156481 Fodinisporobacter 0.00 1 1 S 2901836 Fodinisporobacter ferrooxydans 0.04 115 0 O1 539002 Bacillales incertae sedis 0.04 115 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.04 115 75 G 33986 Exiguobacterium 0.01 37 0 S 132920 Exiguobacterium antarcticum 0.01 37 37 S1 1087448 Exiguobacterium antarcticum B7 0.00 2 0 G1 2644629 unclassified Exiguobacterium 0.00 1 1 S 360911 Exiguobacterium sp. AT1b 0.00 1 1 S 2829816 Exiguobacterium sp. PFWT01 0.00 1 1 S 1428684 Exiguobacterium alkaliphilum 0.02 49 0 F 539738 Gemellaceae 0.02 49 1 G 1378 Gemella 0.01 48 48 G1 2624949 unclassified Gemella 0.00 13 0 F 186824 Thermoactinomycetaceae 0.00 8 0 G 1677050 Novibacillus 0.00 8 8 S 1471761 Novibacillus thermophilus 0.00 4 0 G 1348505 Polycladomyces 0.00 4 4 S 1125966 Polycladomyces abyssicola 0.00 1 0 G 292635 Laceyella 0.00 1 1 S 37482 Laceyella sacchari 0.00 7 0 F 3076164 Abyssicoccaceae 0.00 7 0 G 1955413 Abyssicoccus 0.00 7 7 S 1817405 Abyssicoccus albus 0.00 1 0 F 186821 Sporolactobacillaceae 0.00 1 0 G 2077 Sporolactobacillus 0.00 1 1 S 269673 Sporolactobacillus terrae 15.96 51717 3350 O 186826 Lactobacillales 6.66 21562 4 F 81852 Enterococcaceae 6.59 21354 421 G 1350 Enterococcus 3.50 11338 11186 S 1351 Enterococcus faecalis 0.05 152 152 S1 1201292 Enterococcus faecalis ATCC 29212 1.73 5605 5510 S 1352 Enterococcus faecium 0.03 86 86 S1 1344042 Enterococcus faecium T110 0.00 7 7 S1 1328870 Enterococcus faecium UC7251 0.00 2 2 S1 333849 Enterococcus faecium DO 1.16 3756 3698 S 1354 Enterococcus hirae 0.02 58 58 S1 768486 Enterococcus hirae ATCC 9790 0.04 130 130 S 1353 Enterococcus gallinarum 0.02 60 60 S 37734 Enterococcus casseliflavus 0.01 44 44 S 44008 Enterococcus cecorum 0.03 110 41 G 2737 Vagococcus 0.01 30 0 G1 2648499 unclassified Vagococcus 0.01 30 30 S 3109030 Vagococcus sp. B2T-5 0.01 21 21 S 633807 Vagococcus penaei 0.00 16 16 S 2714946 Vagococcus coleopterorum 0.00 1 1 S 519472 Vagococcus teuberi 0.00 1 1 S 2991418 Vagococcus intermedius 0.03 94 16 G 51668 Tetragenococcus 0.02 71 71 S 51669 Tetragenococcus halophilus 0.00 4 4 S 290335 Tetragenococcus koreensis 0.00 3 3 S 526944 Tetragenococcus osmophilus 5.76 18670 2044 F 33958 Lactobacillaceae 1.16 3768 2 G 2767886 Levilactobacillus 1.13 3668 3668 S 1580 Levilactobacillus brevis 0.03 96 96 S 2292255 Levilactobacillus suantsaii 0.00 1 1 S 267363 Levilactobacillus zymae 0.00 1 1 S 380393 Levilactobacillus namurensis 0.68 2196 1 G 2767885 Latilactobacillus 0.67 2160 2159 S 1599 Latilactobacillus sakei 0.00 1 1 S1 214326 Latilactobacillus sakei subsp. sakei 0.01 35 35 S 28038 Latilactobacillus curvatus 0.60 1939 20 G 2767842 Lactiplantibacillus 0.35 1136 1136 S 1589 Lactiplantibacillus pentosus 0.24 776 597 S 1590 Lactiplantibacillus plantarum 0.06 179 179 S1 337330 Lactiplantibacillus plantarum subsp. plantarum 0.00 7 7 S 60520 Lactiplantibacillus paraplantarum 0.43 1408 72 G 1578 Lactobacillus 0.10 318 318 S 47770 Lactobacillus crispatus 0.07 215 0 S 1584 Lactobacillus delbrueckii 0.05 167 0 S1 1585 Lactobacillus delbrueckii subsp. bulgaricus 0.05 157 157 S2 321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 0.00 10 10 S2 390333 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 0.01 35 35 S1 29397 Lactobacillus delbrueckii subsp. lactis 0.00 13 0 S1 83684 Lactobacillus delbrueckii subsp. delbrueckii 0.00 13 13 S2 1423823 Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 = JCM 1012 0.06 207 207 S 1587 Lactobacillus helveticus 0.06 198 4 G1 2620435 unclassified Lactobacillus 0.06 191 191 S 2695882 Lactobacillus sp. 3B(2020) 0.00 2 2 S 2983232 Lactobacillus sp. ESL0785 0.00 1 1 S 2983221 Lactobacillus sp. ESL0731 0.05 176 164 S 1579 Lactobacillus acidophilus 0.00 12 12 S1 272621 Lactobacillus acidophilus NCFM 0.05 151 151 S 147802 Lactobacillus iners 0.01 39 39 S 83683 Lactobacillus amylolyticus 0.01 17 17 S 2012495 Lactobacillus panisapium 0.00 5 5 S 267818 Lactobacillus kefiranofaciens 0.00 3 3 S 2269374 Lactobacillus terrae 0.00 2 2 S 1596 Lactobacillus gasseri 0.00 1 1 S 109790 Lactobacillus jensenii 0.00 1 1 S 1600 Lactobacillus acetotolerans 0.00 1 1 S 151781 Lactobacillus intestinalis 0.00 1 1 S 508451 Lactobacillus taiwanensis 0.00 1 1 S 2107999 Lactobacillus paragasseri 0.41 1342 1331 G 2767893 Lentilactobacillus 0.00 11 8 S 1581 Lentilactobacillus buchneri 0.00 3 0 S1 2737512 Lentilactobacillus buchneri subsp. silagei 0.00 3 3 S2 1071400 Lentilactobacillus buchneri subsp. silagei CD034 0.39 1263 223 G 2767887 Ligilactobacillus 0.25 819 780 S 1624 Ligilactobacillus salivarius 0.01 39 39 S1 1194971 Ligilactobacillus salivarius str. Ren 0.03 100 100 S 89059 Ligilactobacillus acidipiscis 0.02 54 54 S 1605 Ligilactobacillus animalis 0.01 47 47 S 1606 Ligilactobacillus aviarius 0.00 13 13 S 1601 Ligilactobacillus agilis 0.00 5 5 S 762833 Ligilactobacillus faecis 0.00 2 2 S 1623 Ligilactobacillus ruminis 0.28 923 0 G 2930384 Periweissella 0.28 923 923 S 2506420 Periweissella cryptocerci 0.23 736 11 G 2759736 Lacticaseibacillus 0.13 405 405 S 3025672 Lacticaseibacillus pabuli 0.07 228 51 S 1597 Lacticaseibacillus paracasei 0.05 174 174 S1 113557 Lacticaseibacillus paracasei subsp. tolerans 0.00 3 0 S1 47714 Lacticaseibacillus paracasei subsp. paracasei 0.00 3 3 S2 537973 Lacticaseibacillus paracasei subsp. paracasei 8700:2 0.03 86 86 S 47715 Lacticaseibacillus rhamnosus 0.00 4 4 S 171523 Lacticaseibacillus pantheris 0.00 2 2 S 3068305 Lacticaseibacillus parahuelsenbergensis 0.22 697 673 G 1243 Leuconostoc 0.00 13 13 S 1252 Leuconostoc carnosum 0.00 4 4 S 1246 Leuconostoc lactis 0.00 3 0 G1 2685106 unclassified Leuconostoc 0.00 3 3 S 979982 Leuconostoc sp. C2 0.00 2 1 G1 3016637 Leuconostoc gelidum group 0.00 1 1 S 115778 Leuconostoc gasicomitatum 0.00 1 1 S 1245 Leuconostoc mesenteroides 0.00 1 1 S 2766470 Leuconostoc falkenbergense 0.16 511 7 G 2742598 Limosilactobacillus 0.11 372 372 S 1598 Limosilactobacillus reuteri 0.04 117 117 S 1613 Limosilactobacillus fermentum 0.00 9 9 S 227942 Limosilactobacillus gastricus 0.00 3 3 S 1633 Limosilactobacillus vaginalis 0.00 2 2 S 35787 Limosilactobacillus pontis 0.00 1 1 S 1632 Limosilactobacillus oris 0.15 499 16 G 2767881 Fructilactobacillus 0.13 426 426 S 1625 Fructilactobacillus sanfranciscensis 0.01 40 40 S 1614 Fructilactobacillus fructivorans 0.00 15 15 S 2940300 Fructilactobacillus hinvesii 0.00 1 1 S 53444 Fructilactobacillus lindneri 0.00 1 1 S 2940297 Fructilactobacillus carniphilus 0.10 340 83 G 2767877 Apilactobacillus 0.08 247 247 S 2923364 Apilactobacillus apisilvae 0.00 9 9 S 1218495 Apilactobacillus apinorum 0.00 1 1 S 2419772 Apilactobacillus bombintestini 0.08 275 21 G 2767878 Bombilactobacillus 0.08 254 254 S 1303590 Bombilactobacillus bombi 0.07 233 86 G 1253 Pediococcus 0.02 75 75 S 480391 Pediococcus argentinicus 0.02 59 59 S 1255 Pediococcus pentosaceus 0.00 12 0 G1 1670797 Pediococcus acidilactici group 0.00 12 12 S 1254 Pediococcus acidilactici 0.00 1 0 G1 554805 unclassified Pediococcus 0.00 1 1 S 2962679 Pediococcus sp. AC40 0.03 96 80 G 2767888 Liquorilactobacillus 0.00 11 11 S 82688 Liquorilactobacillus nagelii 0.00 5 2 S 468911 Liquorilactobacillus hordei 0.00 3 3 S1 1423759 Liquorilactobacillus hordei DSM 19519 0.03 84 0 G 2767874 Acetilactobacillus 0.03 84 84 S 1720083 Acetilactobacillus jinshanensis 0.03 81 0 G 2767892 Secundilactobacillus 0.02 74 74 S 176292 Secundilactobacillus malefermentans 0.00 7 7 S 240427 Secundilactobacillus paracollinoides 0.02 63 15 G 2767889 Loigolactobacillus 0.01 41 35 S 1610 Loigolactobacillus coryniformis 0.00 6 0 S1 115542 Loigolactobacillus coryniformis subsp. torquens 0.00 6 6 S2 1423822 Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 0.00 6 6 S 375175 Loigolactobacillus backii 0.00 1 1 S 1607 Loigolactobacillus bifermentans 0.02 61 0 G 2767882 Furfurilactobacillus 0.02 61 61 S 231049 Furfurilactobacillus rossiae 0.01 45 18 G 46255 Weissella 0.00 9 9 S 1249 Weissella paramesenteroides 0.00 8 8 S 155866 Weissella soli 0.00 5 5 S 1631871 Weissella jogaejeotgali 0.00 3 3 S 759620 Weissella ceti 0.00 2 2 S 137591 Weissella cibaria 0.01 27 5 G 2767879 Companilactobacillus 0.00 7 7 S 938155 Companilactobacillus futsaii 0.00 7 7 S 1007676 Companilactobacillus ginsenosidimutans 0.00 7 7 S 1847728 Companilactobacillus allii 0.00 1 0 S 1602 Companilactobacillus alimentarius 0.00 1 1 S1 1423720 Companilactobacillus alimentarius DSM 20249 0.00 14 0 G 2767891 Schleiferilactobacillus 0.00 14 14 S 304207 Schleiferilactobacillus harbinensis 0.00 8 0 G 2767884 Lapidilactobacillus 0.00 8 8 S 51664 Lapidilactobacillus dextrinicus 0.00 5 0 G 2767876 Amylolactobacillus 0.00 5 0 S 1603 Amylolactobacillus amylophilus 0.00 5 5 S1 1423721 Amylolactobacillus amylophilus DSM 20533 = JCM 1125 0.00 4 4 G 3118928 Xylocopilactobacillus 0.00 3 0 G 559173 Fructobacillus 0.00 3 3 S 2940302 Fructobacillus americanaquae 0.00 3 2 G 46254 Oenococcus 0.00 1 0 S 336988 Oenococcus kitaharae 0.00 1 1 S1 1045004 Oenococcus kitaharae DSM 17330 0.00 2 1 G 2767890 Paucilactobacillus 0.00 1 1 S 1296540 Paucilactobacillus nenjiangensis 1.67 5396 6 F 1300 Streptococcaceae 1.55 5023 779 G 1301 Streptococcus 0.52 1677 1677 S 1811193 Streptococcus pantholopis 0.22 701 399 S 1308 Streptococcus thermophilus 0.06 206 206 S1 322159 Streptococcus thermophilus LMD-9 0.03 96 96 S1 767463 Streptococcus thermophilus ND03 0.20 651 605 S 1311 Streptococcus agalactiae 0.01 46 46 S1 1203670 Streptococcus agalactiae GD201008-001 0.10 337 318 S 1314 Streptococcus pyogenes 0.01 19 0 S1 301449 Streptococcus pyogenes serotype M5 0.01 19 19 S2 160491 Streptococcus pyogenes str. Manfredo 0.08 268 268 S 1310 Streptococcus sobrinus 0.05 146 146 S 1346 Streptococcus iniae 0.03 108 108 S 1345 Streptococcus ferus 0.02 77 27 S 1313 Streptococcus pneumoniae 0.02 50 50 S1 869311 Streptococcus pneumoniae SPN032672 0.02 64 64 S 68892 Streptococcus infantis 0.02 61 61 S 1111760 Streptococcus troglodytae 0.02 56 56 S 82348 Streptococcus pluranimalium 0.01 41 0 G1 119603 Streptococcus dysgalactiae group 0.01 41 35 S 1334 Streptococcus dysgalactiae 0.00 5 5 S1 99822 Streptococcus dysgalactiae subsp. dysgalactiae 0.00 1 1 S1 119602 Streptococcus dysgalactiae subsp. equisimilis 0.01 17 16 G1 2608887 unclassified Streptococcus 0.00 1 1 S 2420310 Streptococcus sp. FDAARGOS_522 0.00 14 14 S 2021971 Streptococcus respiraculi 0.00 9 9 S 1304 Streptococcus salivarius 0.00 7 0 G1 671232 Streptococcus anginosus group 0.00 7 7 S 1328 Streptococcus anginosus 0.00 2 2 S 1309 Streptococcus mutans 0.00 2 2 S 1341 Streptococcus ratti 0.00 2 2 S 2173853 Streptococcus chenjunshii 0.00 1 1 S 2686210 Streptococcus ruminicola 0.00 1 1 S 1348 Streptococcus parauberis 0.00 1 0 S 1307 Streptococcus suis 0.00 1 1 S1 1340847 Streptococcus suis T15 0.00 1 1 S 400065 Streptococcus merionis 0.11 365 48 G 1357 Lactococcus 0.08 248 247 S 1359 Lactococcus cremoris 0.00 1 0 S1 2816960 Lactococcus cremoris subsp. cremoris 0.00 1 1 S2 1104322 Lactococcus cremoris subsp. cremoris A76 0.02 58 0 S 1363 Lactococcus garvieae 0.02 58 58 S1 1890280 Lactococcus garvieae subsp. garvieae 0.00 11 11 S 1358 Lactococcus lactis 0.00 2 0 G 1930830 Floricoccus 0.00 2 2 S 1859475 Floricoccus penangensis 0.65 2117 193 F 186827 Aerococcaceae 0.32 1043 0 G 2862144 Ruoffia 0.32 1043 1043 S 87458 Ruoffia tabacinasalis 0.16 508 152 G 1375 Aerococcus 0.09 283 283 S 87541 Aerococcus christensenii 0.01 41 41 S 3078812 Aerococcus tenax 0.01 32 32 S 128944 Aerococcus urinaehominis 0.10 337 0 G 66831 Facklamia 0.10 337 337 S 178214 Facklamia hominis 0.01 24 0 G 13075 Globicatella 0.01 24 24 S 13076 Globicatella sanguinis 0.00 10 0 G 89092 Ignavigranum 0.00 10 10 S 89093 Ignavigranum ruoffiae 0.00 2 0 G 2761542 Fundicoccus 0.00 2 2 S 2969821 Fundicoccus culcitae 0.19 622 89 F 186828 Carnobacteriaceae 0.09 306 0 G 117563 Granulicatella 0.07 222 222 S 137732 Granulicatella elegans 0.03 84 84 S 46124 Granulicatella adiacens 0.03 112 0 G 82800 Desemzia 0.03 112 112 S 82801 Desemzia incerta 0.02 57 19 G 2747 Carnobacterium 0.01 36 5 S 2751 Carnobacterium maltaromaticum 0.01 31 31 S1 1234679 Carnobacterium maltaromaticum LMA28 0.00 2 2 G1 257487 unclassified Carnobacterium 0.01 33 0 G 191769 Marinilactibacillus 0.01 33 0 G1 2632303 unclassified Marinilactibacillus 0.01 33 33 S 1911586 Marinilactibacillus sp. 15R 0.00 16 0 G 29393 Dolosigranulum 0.00 15 15 S 29394 Dolosigranulum pigrum 0.00 1 0 G1 2622049 unclassified Dolosigranulum 0.00 1 1 S 3110289 Dolosigranulum sp. MSK312 0.00 7 0 G 82802 Trichococcus 0.00 7 0 G1 189664 environmental samples 0.00 7 7 S 189665 uncultured Trichococcus sp. 0.00 2 1 G 1470540 Jeotgalibaca 0.00 1 1 S 1868793 Jeotgalibaca porci 0.16 533 10 C 186801 Clostridia 0.14 468 17 O 186802 Eubacteriales 0.08 269 0 O1 538999 Eubacteriales incertae sedis 0.08 258 0 G 1392389 Intestinimonas 0.08 258 258 S 1297617 Intestinimonas butyriciproducens 0.00 9 0 F 539000 Clostridiales Family XVII. Incertae Sedis 0.00 9 9 G 73918 Thermaerobacter 0.00 2 1 G 1686313 Fenollaria 0.00 1 1 S 938288 Fenollaria massiliensis 0.02 66 3 F 31979 Clostridiaceae 0.02 63 9 G 1485 Clostridium 0.01 45 45 S 1502 Clostridium perfringens 0.00 2 0 G1 2614128 unclassified Clostridium 0.00 2 2 S 3070996 Clostridium sp. MB40-C1 0.00 2 2 S 182773 Clostridium isatidis 0.00 2 2 S 36845 Clostridium intestinale 0.00 1 1 S 36839 Clostridium felsineum 0.00 1 1 S 1520 Clostridium beijerinckii 0.00 1 1 S 1491 Clostridium botulinum 0.02 65 14 F 216572 Oscillospiraceae 0.01 28 0 G 459786 Oscillibacter 0.01 28 28 S 2763056 Oscillibacter hominis 0.01 17 0 G 1263 Ruminococcus 0.00 16 16 S 2564099 Ruminococcus bovis 0.00 1 1 S 1161942 Ruminococcus champanellensis 0.00 3 0 G 2842531 Solibaculum 0.00 3 3 S 2780922 Solibaculum mannosilyticum 0.00 1 0 G 35829 Acetivibrio 0.00 1 1 S 1515 Acetivibrio thermocellus 0.00 1 0 G 3048127 Thermocaproicibacter 0.00 1 1 S 2966552 Thermocaproicibacter melissae 0.00 1 0 G 946234 Flavonifractor 0.00 1 1 S 292800 Flavonifractor plautii 0.00 15 0 F 2867375 Desulfallaceae 0.00 15 0 G 2867376 Desulfoscipio 0.00 15 0 G1 2867378 unclassified Desulfoscipio 0.00 15 15 S 3144975 Desulfoscipio sp. XC116 0.00 14 0 F 186807 Peptococcaceae 0.00 14 0 G 2916693 Desulforamulus 0.00 13 13 S 1833852 Desulforamulus ferrireducens 0.00 1 0 S 1564 Desulforamulus ruminis 0.00 1 1 S1 696281 Desulforamulus ruminis DSM 2154 0.00 12 0 F 3046368 Aristaeellaceae 0.00 12 12 G 3046369 Aristaeella 0.00 4 0 F 31984 Heliobacteriaceae 0.00 4 0 G 79598 Heliorestis 0.00 4 4 S 356322 Heliorestis convoluta 0.00 4 1 F 3082771 Acutalibacteraceae 0.00 3 3 G 1738645 Caproiciproducens 0.00 1 0 F 68298 Syntrophomonadaceae 0.00 1 0 G 129001 Syntrophothermus 0.00 1 0 S 86170 Syntrophothermus lipocalidus 0.00 1 1 S1 643648 Syntrophothermus lipocalidus DSM 12680 0.00 1 0 F 2937909 Desulfitobacteriaceae 0.00 1 1 G 56112 Dehalobacter 0.01 37 0 O 53433 Halanaerobiales 0.01 34 0 F 53434 Halobacteroidaceae 0.01 34 0 G 42417 Halobacteroides 0.01 34 0 S 42422 Halobacteroides halobius 0.01 34 34 S1 748449 Halobacteroides halobius DSM 5150 0.00 2 0 F 972 Halanaerobiaceae 0.00 2 0 G 2330 Halanaerobium 0.00 2 0 S 2331 Halanaerobium praevalens 0.00 2 2 S1 572479 Halanaerobium praevalens DSM 2228 0.00 1 0 O1 387655 Halanaerobiales incertae sedis 0.00 1 0 G 1769008 Anoxybacter 0.00 1 1 S 1323375 Anoxybacter fermentans 0.00 12 0 O 3085636 Lachnospirales 0.00 12 2 F 186803 Lachnospiraceae 0.00 4 0 G 572511 Blautia 0.00 4 0 G1 2648079 unclassified Blautia 0.00 4 4 S 2479767 Blautia sp. SC05B48 0.00 3 0 G 28050 Lachnospira 0.00 3 3 S 39485 Lachnospira eligens 0.00 1 0 G 3031933 Chordicoccus 0.00 1 1 S 2709410 Chordicoccus furentiruminis 0.00 1 0 G 2997360 Anaeropeptidivorans 0.00 1 1 S 2934315 Anaeropeptidivorans aminofermentans 0.00 1 0 G 2944195 Qiania 0.00 1 1 S 2763669 Qiania dongpingensis 0.00 3 0 O 3082720 Peptostreptococcales 0.00 3 3 F 186804 Peptostreptococcaceae 0.00 2 0 O 68295 Thermoanaerobacterales 0.00 1 0 F 186814 Thermoanaerobacteraceae 0.00 1 1 G 28895 Thermoanaerobacterium 0.00 1 0 F 543372 Thermoanaerobacterales Family IV. Incertae Sedis 0.00 1 0 G 252965 Mahella 0.00 1 0 S 252966 Mahella australiensis 0.00 1 1 S1 697281 Mahella australiensis 50-1 BON 0.00 1 0 C1 189325 Clostridia incertae sedis 0.00 1 0 G 3136917 Helicovermis 0.00 1 1 S 3065157 Helicovermis profundi 0.01 24 0 C 526524 Erysipelotrichia 0.01 24 0 O 526525 Erysipelotrichales 0.01 23 0 F 128827 Erysipelotrichaceae 0.01 20 0 G 1918536 Longicatena 0.01 20 20 S 1796635 Longicatena caecimuris 0.00 3 1 G 1647 Erysipelothrix 0.00 2 0 G1 2624170 unclassified Erysipelothrix 0.00 1 1 S 2714928 Erysipelothrix sp. HDW6A 0.00 1 1 S 2714929 Erysipelothrix sp. HDW6B 0.00 1 0 F 2810280 Coprobacillaceae 0.00 1 0 G 2943184 Tannockella 0.00 1 1 S 2899121 Tannockella kyphosi 0.00 9 0 C 909932 Negativicutes 0.00 8 0 O 909929 Selenomonadales 0.00 6 0 F 1843490 Sporomusaceae 0.00 5 0 G 81463 Anaeromusa 0.00 5 0 G1 673272 environmental samples 0.00 5 5 S 673273 uncultured Anaeromusa sp. 0.00 1 1 G 2375 Sporomusa 0.00 2 0 F 1843491 Selenomonadaceae 0.00 1 1 G 970 Selenomonas 0.00 1 1 G 158846 Megamonas 0.00 1 0 O 1843489 Veillonellales 0.00 1 0 F 31977 Veillonellaceae 0.00 1 0 G 39948 Dialister 0.00 1 1 S 39950 Dialister pneumosintes 0.00 4 0 C 1737404 Tissierellia 0.00 4 0 O 1737405 Tissierellales 0.00 4 2 F 1570339 Peptoniphilaceae 0.00 2 0 G 150022 Finegoldia 0.00 2 2 S 1260 Finegoldia magna 0.00 2 0 C 1676648 Limnochordia 0.00 2 0 O 1676649 Limnochordales 0.00 2 0 F 1676650 Limnochordaceae 0.00 2 1 G 1676651 Limnochorda 0.00 1 0 G1 2618576 unclassified Limnochorda 0.00 1 1 S 3109565 Limnochorda sp. L945t 4.80 15551 8 P 201174 Actinomycetota 4.79 15514 97 C 1760 Actinomycetes 4.66 15108 50 O 85007 Mycobacteriales 4.56 14769 0 F 1653 Corynebacteriaceae 4.56 14769 1469 G 1716 Corynebacterium 3.83 12416 0 S 1032851 Corynebacterium nuruki 3.83 12416 12416 S1 863239 Corynebacterium nuruki S6-4 0.04 126 126 S 161895 Corynebacterium phocae 0.04 123 0 S 441501 Corynebacterium massiliense 0.04 123 123 S1 1121364 Corynebacterium massiliense DSM 45435 0.02 72 0 G1 2624378 unclassified Corynebacterium 0.02 67 67 S 1487956 Corynebacterium sp. ATCC 6931 0.00 5 5 S 2599641 Corynebacterium sp. sy039 0.02 68 68 S 108486 Corynebacterium falsenii 0.02 55 55 S 1737425 Corynebacterium provencense 0.01 46 46 S 2080740 Corynebacterium yudongzhengii 0.01 41 0 S 575200 Corynebacterium maris 0.01 41 41 S1 1224163 Corynebacterium maris DSM 45190 0.01 40 40 S 38284 Corynebacterium accolens 0.01 38 38 S 1719 Corynebacterium pseudotuberculosis 0.01 34 34 S 679663 Corynebacterium canis 0.01 30 30 S 61592 Corynebacterium durum 0.01 29 29 S 2055947 Corynebacterium heidelbergense 0.01 28 0 S 1727 Corynebacterium variabile 0.01 28 28 S1 858619 Corynebacterium variabile DSM 44702 0.01 24 1 S 1718 Corynebacterium glutamicum 0.01 23 23 S1 1079988 Corynebacterium glutamicum ATCC 14067 0.01 20 0 S 1230998 Corynebacterium frankenforstense 0.01 20 20 S1 1437875 Corynebacterium frankenforstense DSM 45800 0.00 16 16 S 1758466 Corynebacterium faecale 0.00 14 14 S 2709394 Corynebacterium lizhenjunii 0.00 11 0 S 203263 Corynebacterium aquilae 0.00 11 11 S1 1431546 Corynebacterium aquilae DSM 44791 0.00 10 10 S 43768 Corynebacterium matruchotii 0.00 9 9 S 43771 Corynebacterium urealyticum 0.00 8 8 S 2675218 Corynebacterium comes 0.00 7 7 S 39791 Corynebacterium glucuronolyticum 0.00 7 0 S 89154 Corynebacterium terpenotabidum 0.00 7 7 S1 1200352 Corynebacterium terpenotabidum Y-11 0.00 6 6 S 2709392 Corynebacterium qintianiae 0.00 5 0 S 1121358 Corynebacterium doosanense 0.00 5 5 S1 558173 Corynebacterium doosanense CAU 212 = DSM 45436 0.00 4 0 S 225326 Corynebacterium halotolerans 0.00 4 4 S1 1121362 Corynebacterium halotolerans YIM 70093 = DSM 44683 0.00 4 4 S 191610 Corynebacterium atypicum 0.00 4 4 S 3049799 Corynebacterium breve 0.00 2 2 S 65058 Corynebacterium ulcerans 0.00 2 0 S 227319 Corynebacterium ciconiae 0.00 2 2 S1 1121356 Corynebacterium ciconiae DSM 44920 0.00 1 0 S 1404244 Corynebacterium glyciniphilum 0.00 1 1 S1 1404245 Corynebacterium glyciniphilum AJ 3170 0.07 217 0 F 2805586 Lawsonellaceae 0.07 217 0 G 1847725 Lawsonella 0.07 217 217 S 1528099 Lawsonella clevelandensis 0.01 31 0 F 1762 Mycobacteriaceae 0.01 26 11 G 1763 Mycobacterium 0.00 9 9 S 1769 Mycobacterium leprae 0.00 4 0 G1 77643 Mycobacterium tuberculosis complex 0.00 4 4 S 1773 Mycobacterium tuberculosis 0.00 1 0 G1 2642494 unclassified Mycobacterium 0.00 1 1 S 2857059 Mycobacterium sp. SMC-4 0.00 1 1 S 39689 Mycobacterium gallinarum 0.00 5 0 G 1866885 Mycolicibacterium 0.00 3 3 S 1792 Mycolicibacterium chitae 0.00 1 1 S 1286180 Mycolicibacterium sediminis 0.00 1 1 S 1534348 Mycolicibacterium sarraceniae 0.01 27 0 F 85029 Dietziaceae 0.01 27 24 G 37914 Dietzia 0.00 3 3 S 499555 Dietzia timorensis 0.00 12 0 F 85025 Nocardiaceae 0.00 7 6 G 1827 Rhodococcus 0.00 1 0 G1 192944 unclassified Rhodococcus (in: high G+C Gram-positive bacteria) 0.00 1 1 S 679318 Rhodococcus sp. WMMA185 0.00 5 0 G 1817 Nocardia 0.00 3 3 S 37332 Nocardia seriolae 0.00 1 1 S 2755382 Nocardia huaxiensis 0.00 1 0 G1 2637762 unclassified Nocardia 0.00 1 1 S 2975998 Nocardia sp. NBC_01730 0.00 2 0 F 85026 Gordoniaceae 0.00 2 0 G 2053 Gordonia 0.00 2 0 G1 2657482 unclassified Gordonia (in: high G+C Gram-positive bacteria) 0.00 2 2 S 2742602 Gordonia sp. X0973 0.04 132 21 O 85006 Micrococcales 0.02 49 0 F 85019 Brevibacteriaceae 0.01 47 45 G 1696 Brevibacterium 0.00 1 1 S 33889 Brevibacterium casei 0.00 1 0 G1 2614124 unclassified Brevibacterium 0.00 1 1 S 2777556 Brevibacterium sp. SMBL_HHYL_HB1 0.00 2 0 G 3162691 Saxibacter 0.00 2 2 S 2909229 Saxibacter everestensis 0.01 35 14 F 85023 Microbacteriaceae 0.00 3 3 G 33882 Microbacterium 0.00 3 0 G 1857011 Lysinibacter 0.00 3 0 G1 2619652 unclassified Lysinibacter 0.00 3 3 S 3031408 Lysinibacter sp. HNR 0.00 3 0 F1 1655488 Luna cluster 0.00 3 2 F2 1655489 Luna-1 subcluster 0.00 1 0 G 529881 Aquiluna 0.00 1 0 G1 2617988 unclassified Aquiluna 0.00 1 1 S 1855377 Candidatus Aquiluna sp. UB-MaderosW2red 0.00 3 0 G 447237 Frondihabitans 0.00 3 0 G1 2626248 unclassified Frondihabitans 0.00 3 3 S 1446794 Frondihabitans sp. 762G35 0.00 3 0 G 120212 Subtercola 0.00 3 0 G1 2648727 unclassified Subtercola 0.00 3 3 S 2846775 Subtercola sp. PAMC28395 0.00 2 2 G 33877 Agromyces 0.00 1 0 G 2034 Curtobacterium 0.00 1 0 G1 257496 unclassified Curtobacterium 0.00 1 1 S 2862880 Curtobacterium sp. TC1 0.00 1 0 G 3108736 Antiquaquibacter 0.00 1 1 S 2880260 Antiquaquibacter oligotrophicus 0.00 1 1 G 33886 Rathayibacter 0.00 1 1 G 55968 Leucobacter 0.01 17 4 F 1268 Micrococcaceae 0.00 7 6 G 32207 Rothia 0.00 1 1 S 172042 Rothia aeria 0.00 3 3 G 57493 Kocuria 0.00 1 0 G 1663 Arthrobacter 0.00 1 0 G1 235627 unclassified Arthrobacter 0.00 1 1 S 2991715 Arthrobacter sp. ATA002 0.00 1 1 G 57494 Nesterenkonia 0.00 1 1 G 1160973 Auritidibacter 0.00 3 0 F 2805590 Ornithinimicrobiaceae 0.00 2 2 G 125287 Ornithinimicrobium 0.00 1 1 G 265976 Serinicoccus 0.00 2 1 F 85020 Dermabacteraceae 0.00 1 1 G 43668 Brachybacterium 0.00 2 0 F 145360 Sanguibacteraceae 0.00 2 2 G 60919 Sanguibacter 0.00 1 0 F 85016 Cellulomonadaceae 0.00 1 0 G 1707 Cellulomonas 0.00 1 0 G1 2620175 unclassified Cellulomonas 0.00 1 1 S 2704467 Cellulomonas sp. H30R-01 0.00 1 0 F 85017 Promicromonosporaceae 0.00 1 0 G 186188 Xylanimonas 0.00 1 0 S 186189 Xylanimonas cellulosilytica 0.00 1 1 S1 446471 Xylanimonas cellulosilytica DSM 15894 0.00 1 0 F 145358 Bogoriellaceae 0.00 1 0 G 154116 Georgenia 0.00 1 1 S 2585135 Georgenia wutianyii 0.01 43 5 O 85009 Propionibacteriales 0.01 32 3 F 31957 Propionibacteriaceae 0.01 23 16 G 29404 Microlunatus 0.00 7 0 G1 2619695 unclassified Microlunatus 0.00 7 7 S 2672569 Microlunatus sp. Gsoil 973 0.00 3 0 G 1912216 Cutibacterium 0.00 2 2 S 1747 Cutibacterium acnes 0.00 1 1 S 2559073 Cutibacterium modestum 0.00 1 1 G 72763 Tessaracoccus 0.00 1 0 G 203133 Propionimicrobium 0.00 1 0 G1 2633994 unclassified Propionimicrobium 0.00 1 1 S 3052086 Propionimicrobium sp. PCR01-08-3 0.00 1 0 G 1912215 Acidipropionibacterium 0.00 1 1 S 1749 Acidipropionibacterium jensenii 0.00 5 2 F 85015 Nocardioidaceae 0.00 2 0 G 1839 Nocardioides 0.00 1 1 S 160826 Nocardioides aquaticus 0.00 1 0 S 450734 Nocardioides dokdonensis 0.00 1 1 S1 1300347 Nocardioides dokdonensis FR1436 0.00 1 0 G 2040 Aeromicrobium 0.00 1 1 S 2079793 Aeromicrobium chenweiae 0.00 1 0 F 2726069 Kribbellaceae 0.00 1 1 G 182639 Kribbella 0.01 38 0 O 2037 Actinomycetales 0.01 38 20 F 2049 Actinomycetaceae 0.00 5 0 G 2888879 Nanchangia 0.00 5 5 S 2692125 Nanchangia anserum 0.00 3 3 G 1069494 Trueperella 0.00 3 0 G 2815785 Scrofimicrobium 0.00 3 0 G1 2815815 unclassified Scrofimicrobium 0.00 3 3 S 3079930 Scrofimicrobium sp. R131 0.00 2 0 G 1654 Actinomyces 0.00 2 0 G1 2609248 unclassified Actinomyces 0.00 1 1 S 1851395 Actinomyces sp. Chiba101 0.00 1 1 S 2708340 Actinomyces sp. zg-332 0.00 2 2 G 2529408 Schaalia 0.00 1 0 G 184869 Varibaculum 0.00 1 1 S 2811781 Varibaculum prostatecancerukia 0.00 1 1 G 1522056 Flaviflexus 0.00 1 1 G 2692113 Gleimia 0.01 34 0 O 85010 Pseudonocardiales 0.01 34 30 F 2070 Pseudonocardiaceae 0.00 2 2 G 65496 Actinoalloteichus 0.00 1 0 G 1835 Saccharopolyspora 0.00 1 1 S 524884 Saccharopolyspora rosea 0.00 1 1 G 1847 Pseudonocardia 0.01 27 0 O 85011 Kitasatosporales 0.01 27 0 F 2062 Streptomycetaceae 0.01 26 0 G 1883 Streptomyces 0.01 19 19 S 35621 Streptomyces mobaraensis 0.00 4 0 G1 2593676 unclassified Streptomyces 0.00 1 1 S 2750025 Streptomyces sp. CB00271 0.00 1 1 S 3062782 Streptomyces sp. HUAS CX7 0.00 1 1 S 2898276 Streptomyces sp. MRC013 0.00 1 1 S 2781734 Streptomyces sp. A2-16 0.00 1 1 S 33900 Streptomyces murinus 0.00 1 0 G1 2839105 Streptomyces violaceusniger group 0.00 1 1 S 1226757 Streptomyces rapamycinicus 0.00 1 1 S 42684 Streptomyces collinus 0.00 1 0 G 2805681 Yinghuangia 0.00 1 0 G1 2846306 unclassified Yinghuangia 0.00 1 1 S 2896848 Yinghuangia sp. ASG 101 0.00 13 0 O 85004 Bifidobacteriales 0.00 13 0 F 31953 Bifidobacteriaceae 0.00 13 2 G 1678 Bifidobacterium 0.00 8 0 S 216816 Bifidobacterium longum 0.00 5 5 S1 1682 Bifidobacterium longum subsp. infantis 0.00 3 3 S1 1931217 Bifidobacterium longum subsp. suillum 0.00 2 2 S 77635 Bifidobacterium subtile 0.00 1 0 S 1686 Bifidobacterium catenulatum 0.00 1 1 S1 1447716 Bifidobacterium catenulatum PV20-2 0.00 9 0 O 85014 Glycomycetales 0.00 9 0 F 85034 Glycomycetaceae 0.00 6 0 G 283810 Stackebrandtia 0.00 6 0 S 283811 Stackebrandtia nassauensis 0.00 6 6 S1 446470 Stackebrandtia nassauensis DSM 44728 0.00 3 0 G 2838311 Natronoglycomyces 0.00 3 3 S 2811108 Natronoglycomyces albus 0.00 4 0 O 85013 Frankiales 0.00 4 0 F 74712 Frankiaceae 0.00 2 0 G 1854 Frankia 0.00 2 2 S 106370 Frankia casuarinae 0.00 2 0 G 2994361 Protofrankia 0.00 2 2 S 2716812 Candidatus Protofrankia datiscae 0.00 3 0 O 85012 Streptosporangiales 0.00 2 0 F 2004 Streptosporangiaceae 0.00 1 0 G 2005 Microbispora 0.00 1 1 S 568844 Microbispora hainanensis 0.00 1 0 G 147067 Thermobispora 0.00 1 1 S 2006 Thermobispora bispora 0.00 1 0 F 83676 Nocardiopsaceae 0.00 1 0 G 104204 Streptomonospora 0.00 1 1 S 2498135 Streptomonospora litoralis 0.00 3 0 O 2039638 Candidatus Nanopelagicales 0.00 3 2 F 2162846 Candidatus Nanopelagicaceae 0.00 1 0 G 622681 Candidatus Planktophila 0.00 1 1 S 1884913 Candidatus Planktophila lacus 0.00 1 0 O 85008 Micromonosporales 0.00 1 0 F 28056 Micromonosporaceae 0.00 1 0 G 168694 Salinispora 0.00 1 0 S 168695 Salinispora tropica 0.00 1 1 S1 369723 Salinispora tropica CNB-440 0.00 1 0 O 622450 Actinopolysporales 0.00 1 0 F 622451 Actinopolysporaceae 0.00 1 0 G 1849 Actinopolyspora 0.00 1 1 S 414996 Actinopolyspora erythraea 0.00 1 0 O 1643682 Geodermatophilales 0.00 1 1 F 85030 Geodermatophilaceae 0.00 12 1 C 84998 Coriobacteriia 0.00 10 0 O 1643822 Eggerthellales 0.00 10 3 F 1643826 Eggerthellaceae 0.00 6 0 G 84162 Cryptobacterium 0.00 6 0 S 84163 Cryptobacterium curtum 0.00 6 6 S1 469378 Cryptobacterium curtum DSM 15641 0.00 1 0 G 79603 Denitrobacterium 0.00 1 1 S 79604 Denitrobacterium detoxificans 0.00 1 0 O 84999 Coriobacteriales 0.00 1 1 F 1643824 Atopobiaceae 0.00 10 0 C 84992 Acidimicrobiia 0.00 10 0 O 84993 Acidimicrobiales 0.00 10 0 F 633392 Iamiaceae 0.00 10 0 G 467975 Iamia 0.00 10 10 S 467976 Iamia majanohamensis 0.00 6 0 C 1497346 Thermoleophilia 0.00 5 1 O 588673 Solirubrobacterales 0.00 4 0 F 2600303 Baekduiaceae 0.00 4 0 G 3231543 Svornostia 0.00 4 4 S 2898438 Svornostia abyssi 0.00 1 0 O 588674 Thermoleophilales 0.00 1 0 F 320796 Thermoleophilaceae 0.00 1 0 G 192992 Thermoleophilum 0.00 1 1 S 29539 Thermoleophilum album 0.00 1 0 C 908620 Nitriliruptoria 0.00 1 0 O 1747768 Egibacterales 0.00 1 0 F 1747769 Egibacteraceae 0.00 1 0 G 1747770 Egibacter 0.00 1 1 S 1670831 Egibacter rhizosphaerae 0.01 47 18 P 544448 Mycoplasmatota 0.01 18 2 C 31969 Mollicutes 0.00 7 0 O 186328 Entomoplasmatales 0.00 7 0 F 2131 Spiroplasmataceae 0.00 7 2 G 2132 Spiroplasma 0.00 3 0 S 301585 Spiroplasma platyhelix 0.00 3 3 S1 1276218 Spiroplasma platyhelix PALS-1 0.00 1 1 G1 2637901 unclassified Spiroplasma 0.00 1 1 S 2133 Spiroplasma citri 0.00 7 0 O 186329 Acholeplasmatales 0.00 7 0 F 2146 Acholeplasmataceae 0.00 6 6 G 33926 Candidatus Phytoplasma 0.00 1 0 G 2903100 Mariniplasma 0.00 1 1 S 2735436 Mariniplasma anaerobium 0.00 2 0 O 2085 Mycoplasmatales 0.00 1 0 F 2092 Mycoplasmataceae 0.00 1 0 G 2093 Mycoplasma 0.00 1 0 G1 656088 Mycoplasma mycoides group 0.00 1 0 S 2095 Mycoplasma capricolum 0.00 1 1 S1 40480 Mycoplasma capricolum subsp. capripneumoniae 0.00 1 0 O1 1665628 unclassified Mycoplasmatales 0.00 1 1 S 1609546 endosymbiont DhMRE of Dentiscutata heterogama 0.00 10 0 O 2790996 Mycoplasmoidales 0.00 9 0 F 2790998 Mycoplasmoidaceae 0.00 7 0 G 2791001 Malacoplasma 0.00 7 0 S 28227 Malacoplasma penetrans 0.00 7 7 S1 272633 Malacoplasma penetrans HF-2 0.00 2 2 G 2995234 Mycoplasmoides 0.00 1 0 F 2895623 Metamycoplasmataceae 0.00 1 0 G 2767358 Mycoplasmopsis 0.00 1 1 S 33923 Mycoplasmopsis felis 0.00 1 0 C 1912503 Candidatus Izimaplasma 0.00 1 0 O 2975519 Candidatus Izemoplasmatales 0.00 1 0 F 3078170 Hujiaoplasmataceae 0.00 1 0 G 3078171 Hujiaoplasma 0.00 1 1 S 2725268 Hujiaoplasma nucleasis 0.00 12 0 P 200795 Chloroflexota 0.00 5 0 C 32061 Chloroflexia 0.00 5 0 O 3139175 Candidatus Chloroheliales 0.00 5 0 F 3139177 Candidatus Chloroheliaceae 0.00 5 0 G 3139173 Candidatus Chlorohelix 0.00 5 5 S 3003348 Candidatus Chlorohelix allophototropha 0.00 4 0 C 292625 Anaerolineae 0.00 4 0 O 292629 Anaerolineales 0.00 4 0 F 292628 Anaerolineaceae 0.00 2 0 G 233189 Anaerolinea 0.00 2 0 S 167964 Anaerolinea thermophila 0.00 2 2 S1 926569 Anaerolinea thermophila UNI-1 0.00 2 0 G 1649478 Pelolinea 0.00 2 2 S 913107 Pelolinea submarina 0.00 2 0 C 2682225 Tepidiformia 0.00 2 0 O 2682226 Tepidiformales 0.00 2 0 F 2682227 Tepidiformaceae 0.00 2 2 G 2682228 Tepidiforma 0.00 1 0 C 301297 Dehalococcoidia 0.00 1 0 C1 648176 SAR202 cluster 0.00 1 0 O 3143247 Candidatus Lucifugimonadales 0.00 1 0 F 3143248 Candidatus Lucifugimonadaceae 0.00 1 0 G 3143249 Candidatus Lucifugimonas 0.00 1 1 S 3038979 Candidatus Lucifugimonas marina 0.00 8 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.00 8 0 P 1117 Cyanobacteriota 0.00 8 2 C 3028117 Cyanophyceae 0.00 4 0 O 1161 Nostocales 0.00 3 0 F 2661849 Calotrichaceae 0.00 3 0 G 1186 Calothrix 0.00 3 3 G1 2619626 unclassified Calothrix 0.00 1 1 F 1162 Nostocaceae 0.00 2 0 C1 1301283 Oscillatoriophycideae 0.00 1 0 O 1118 Chroococcales 0.00 1 0 F 2815910 Geminocystaceae 0.00 1 0 G 669357 Geminocystis 0.00 1 0 G1 2625037 unclassified Geminocystis 0.00 1 1 S 1615909 Geminocystis sp. NIES-3708 0.00 1 0 O 1150 Oscillatoriales 0.00 1 0 F 1892254 Oscillatoriaceae 0.00 1 0 G 1198 Phormidium 0.00 1 0 S 2974039 Phormidium yuhuli 0.00 1 1 S1 2940671 Phormidium yuhuli AB48 0.00 2 0 P 3027942 Thermomicrobiota 0.00 2 0 C 189775 Thermomicrobia 0.00 2 0 O 85001 Sphaerobacterales 0.00 2 0 O1 255728 Sphaerobacterineae 0.00 2 0 F 85002 Sphaerobacteraceae 0.00 2 0 G 2056 Sphaerobacter 0.00 2 0 S 2057 Sphaerobacter thermophilus 0.00 2 2 S1 479434 Sphaerobacter thermophilus DSM 20745 43.31 140325 155 P 1224 Pseudomonadota 37.06 120048 254 C 28211 Alphaproteobacteria 36.79 119192 53 O 204441 Rhodospirillales 36.75 119073 2080 F 433 Acetobacteraceae 34.75 112580 9182 G 434 Acetobacter 31.62 102442 102442 S 1076596 Acetobacter persici 0.22 728 728 S 2592655 Acetobacter vaccinii 0.03 97 0 G1 2628570 unclassified Acetobacter 0.03 97 97 S 3157859 Acetobacter sp. A11-2 0.02 74 74 S 65959 Acetobacter pomorum 0.02 57 0 G1 151157 Acetobacter subgen. Acetobacter 0.02 57 57 S 435 Acetobacter aceti 0.96 3108 111 G 1434011 Komagataeibacter 0.89 2899 0 S 1177712 Komagataeibacter medellinensis 0.89 2899 2899 S1 634177 Komagataeibacter medellinensis NBRC 3288 0.02 56 56 S 65958 Komagataeibacter oboediens 0.01 38 38 S 265960 Komagataeibacter nataicola 0.00 2 2 S 28448 Komagataeibacter xylinus 0.00 2 2 S 265959 Komagataeibacter saccharivorans 0.09 306 0 G 1079922 Commensalibacter 0.09 306 306 S 2070537 Commensalibacter melissae 0.06 198 12 G 125216 Roseomonas 0.05 173 173 S 2768162 Roseomonas haemaphysalidis 0.00 12 12 S 1750527 Roseomonas fluvialis 0.00 1 1 S 2768161 Roseomonas marmotae 0.06 195 0 G 504465 Rhodovastum 0.06 195 195 S 504468 Rhodovastum atsumiense 0.03 96 89 G 1602345 Parasaccharibacter 0.00 5 5 S 1510841 Parasaccharibacter apium 0.00 2 0 G1 2626400 unclassified Parasaccharibacter 0.00 2 2 S 2268025 Parasaccharibacter sp. TMW 2.1888 0.02 80 0 G 512381 Acidisoma 0.02 80 0 G1 2634065 unclassified Acidisoma 0.02 80 80 S 3040935 Acidisoma sp. PAMC 29798 0.02 75 0 G 3027666 Aristophania 0.02 75 75 S 2697033 Aristophania vespae 0.02 68 0 G 2811380 Entomobacter 0.02 68 68 S 2762277 Entomobacter blattae 0.02 59 22 G 441 Gluconobacter 0.01 26 0 S 442 Gluconobacter oxydans 0.01 26 26 S1 1288313 Gluconobacter oxydans DSM 3504 0.00 10 10 S 318683 Gluconobacter albidus 0.00 1 1 S 38308 Gluconobacter frateurii 0.01 39 0 G 50709 Acidocella 0.01 39 0 G1 2648610 unclassified Acidocella 0.01 39 39 S 2697363 Acidocella sp. MX-AZ03 0.01 33 0 G 364409 Granulibacter 0.01 33 33 S 364410 Granulibacter bethesdensis 0.01 29 0 G 2804525 Lichenicola 0.01 29 29 S 1484109 Lichenicola cladoniae 0.01 27 0 G 91914 Asaia 0.01 27 0 S 91915 Asaia bogorensis 0.01 27 27 S1 1231624 Asaia bogorensis NBRC 16594 0.01 27 0 G 3097638 Candidatus Kirkpatrickella 0.01 27 27 S 2984322 Candidatus Kirkpatrickella diaphorinae 0.01 18 0 G 2791118 Oecophyllibacter 0.01 18 18 S 2558360 Oecophyllibacter saccharovorans 0.00 12 0 G 2870717 Pseudoroseomonas 0.00 12 12 S 204525 Pseudoroseomonas cervicalis 0.00 7 0 G 89583 Gluconacetobacter 0.00 7 0 S 33996 Gluconacetobacter diazotrophicus 0.00 7 7 S1 272568 Gluconacetobacter diazotrophicus PA1 5 0.00 7 0 G 1519186 Nguyenibacter 0.00 7 7 S 1216886 Nguyenibacter vanlangensis 0.00 5 0 G 153497 Kozakia 0.00 5 5 S 153496 Kozakia baliensis 0.00 5 0 G 1223423 Neokomagataea 0.00 5 5 S 661191 Neokomagataea tanensis 0.00 5 5 G 522 Acidiphilium 0.00 5 0 G 2952773 Formicincola 0.00 5 5 S 2558361 Formicincola oecophyllae 0.00 3 0 G 320496 Neoasaia 0.00 3 3 S 320497 Neoasaia chiangmaiensis 0.00 2 0 G 35812 Roseococcus 0.00 2 2 S 2771361 Roseococcus microcysteis 0.00 2 2 G 1706033 Sediminicoccus 0.00 1 0 G 2870712 Pararoseomonas 0.00 1 0 G1 2870718 unclassified Pararoseomonas 0.00 1 1 S 3114537 Pararoseomonas sp. SCSIO 73927 0.00 1 0 G 2603324 Acidibrevibacterium 0.00 1 1 S 1969806 Acidibrevibacterium fodinaquatile 0.01 20 1 F 41295 Rhodospirillaceae 0.00 9 0 G 1231242 Ferrovibrio 0.00 9 9 S 2594003 Ferrovibrio terrae 0.00 4 0 G 13134 Magnetospirillum 0.00 4 4 S 55518 Magnetospirillum gryphiswaldense 0.00 3 0 G 111830 Defluviicoccus 0.00 3 3 S 111831 Defluviicoccus vanus 0.00 2 0 G 1263978 Candidatus Endolissoclinum 0.00 2 1 S 1263979 Candidatus Endolissoclinum faulkneri 0.00 1 1 S1 1401328 Candidatus Endolissoclinum faulkneri L5 0.00 1 0 G 1081 Rhodospirillum 0.00 1 1 S 1085 Rhodospirillum rubrum 0.00 14 0 F 3031144 Dongiaceae 0.00 14 4 G 2705399 Hypericibacter 0.00 10 10 S 2602016 Hypericibacter adhaerens 0.00 11 0 F 2690195 Elioraeaceae 0.00 11 0 G 457933 Elioraea 0.00 11 11 S 2843330 Elioraea tepida 0.00 9 0 F 2829815 Azospirillaceae 0.00 5 5 G 204447 Skermanella 0.00 3 0 G 191 Azospirillum 0.00 3 3 S 1064539 Azospirillum baldaniorum 0.00 1 0 G 1543704 Niveispirillum 0.00 1 1 S 1612173 Niveispirillum cyanobacteriorum 0.00 6 0 F 2844601 Stellaceae 0.00 6 0 G 93 Stella 0.00 6 6 S 94 Stella humosa 0.00 5 0 F 597359 Kiloniellaceae 0.00 5 0 G 1647175 Aestuariispira 0.00 5 5 S 2775080 Aestuariispira ectoiniformans 0.00 1 0 F 2844866 Thalassospiraceae 0.00 1 0 G 168934 Thalassospira 0.00 1 0 G1 2648997 unclassified Thalassospira 0.00 1 1 S 2785908 Thalassospira sp. A40-3 0.06 203 1 O 766 Rickettsiales 0.05 168 0 F 942 Anaplasmataceae 0.05 167 0 F1 952 Wolbachieae 0.05 167 1 G 953 Wolbachia 0.05 163 0 G1 2640676 unclassified Wolbachia 0.05 157 157 S 375919 Wolbachia endosymbiont of Drosophila pseudotakahashii 0.00 4 4 S 3080329 Wolbachia endosymbiont of Drosophila aff. chauvacae BK-2020 0.00 1 1 S 1812111 Wolbachia endosymbiont of Cruorifilaria tuberocauda 0.00 1 1 S 3066201 Wolbachia endosymbiont (group A) of Lasioglossum fulvicorne 0.00 3 3 S 955 Wolbachia pipientis 0.00 1 1 G 768 Anaplasma 0.01 28 2 F 775 Rickettsiaceae 0.01 26 17 F1 33988 Rickettsieae 0.00 5 0 G 780 Rickettsia 0.00 2 0 G1 114277 spotted fever group 0.00 1 0 S 786 Rickettsia akari 0.00 1 1 S1 293614 Rickettsia akari str. Hartford 0.00 1 0 S 33991 Rickettsia montanensis 0.00 1 1 S1 1105114 Rickettsia montanensis str. OSU 85-930 0.00 2 0 G1 1129742 belli group 0.00 2 2 S 788 Rickettsia canadensis 0.00 1 0 G1 114295 unclassified Rickettsia 0.00 1 1 S 1182263 Rickettsia sp. MEAM1 (Bemisia tabaci) 0.00 3 0 G 2601645 Candidatus Sneabacter 0.00 3 3 S 2601646 Candidatus Sneabacter namystus 0.00 1 0 G 2996317 Candidatus Tisiphia 0.00 1 0 G1 2996318 unclassified Candidatus Tisiphia 0.00 1 1 S 3066272 Candidatus Tisiphia endosymbiont of Ditula angustiorana 0.00 6 0 F 1328881 Candidatus Midichloriaceae 0.00 6 0 G 411566 Candidatus Midichloria 0.00 6 0 S 234827 Candidatus Midichloria mitochondrii 0.00 6 6 S1 696127 Candidatus Midichloria mitochondrii IricVA 0.05 148 18 O 356 Hyphomicrobiales 0.01 40 2 F 82115 Rhizobiaceae 0.01 29 4 F1 227290 Rhizobium/Agrobacterium group 0.01 19 0 G 1612611 Pararhizobium 0.01 19 13 G1 2643050 unclassified Pararhizobium 0.00 5 5 S 3067903 Pararhizobium sp. IMCC21322 0.00 1 1 S 3067904 Pararhizobium sp. IMCC3301 0.00 3 1 G 379 Rhizobium 0.00 1 0 S 29449 Rhizobium etli 0.00 1 0 S1 323733 Rhizobium etli bv. mimosae 0.00 1 1 S2 1432050 Rhizobium etli bv. mimosae str. IE4771 0.00 1 1 S 2081791 Rhizobium ruizarguesonis 0.00 2 0 G 357 Agrobacterium 0.00 2 0 G1 1183400 Agrobacterium tumefaciens complex 0.00 2 2 S 358 Agrobacterium tumefaciens 0.00 1 0 G 1525371 Neorhizobium 0.00 1 1 S 515361 Neorhizobium petrolearium 0.00 6 0 F1 227292 Sinorhizobium/Ensifer group 0.00 6 0 G 28105 Sinorhizobium 0.00 6 6 S 382 Sinorhizobium meliloti 0.00 2 0 G 34019 Liberibacter 0.00 2 0 S 556287 Candidatus Liberibacter solanacearum 0.00 2 2 S1 658172 Candidatus Liberibacter solanacearum CLso-ZC1 0.00 1 0 G 1648508 Ciceribacter 0.00 1 1 S 1969821 Ciceribacter thiooxidans 0.01 28 0 F 2813035 Parvibaculaceae 0.01 27 0 G 2838250 Kaustia 0.01 27 27 S 2593653 Kaustia mangrovi 0.00 1 0 G 444432 Anderseniella 0.00 1 0 G1 2614933 unclassified Anderseniella 0.00 1 1 S 1922226 Anderseniella sp. Alg231-50 0.01 19 0 F 45401 Hyphomicrobiaceae 0.01 18 18 G 81 Hyphomicrobium 0.00 1 0 G 119044 Filomicrobium 0.00 1 1 S 1608628 Candidatus Filomicrobium marinum 0.00 11 0 F 255475 Aurantimonadaceae 0.00 11 0 G 414371 Aureimonas 0.00 10 0 G1 2615206 unclassified Aureimonas 0.00 10 10 S 2826993 Aureimonas sp. SA4125 0.00 1 1 S 2758041 Aureimonas mangrovi 0.00 10 0 O1 119042 Hyphomicrobiales incertae sedis 0.00 10 0 G 212791 Enhydrobacter 0.00 10 0 G1 2632691 unclassified Enhydrobacter 0.00 10 10 S 1894999 Enhydrobacter sp. 0.00 7 0 F 118882 Brucellaceae 0.00 7 1 F1 2826938 Brucella/Ochrobactrum group 0.00 6 0 G 234 Brucella 0.00 3 3 S 94625 Brucella intermedia 0.00 2 0 S 29459 Brucella melitensis 0.00 2 0 S1 645169 Brucella melitensis bv. 2 0.00 2 2 S2 520465 Brucella melitensis bv. 2 str. 63/9 0.00 1 0 G1 2632610 unclassified Brucella 0.00 1 1 S 3142977 Brucella sp. BE17 0.00 6 1 F 41294 Nitrobacteraceae 0.00 4 0 G 1395974 Tardiphaga 0.00 4 4 S 340268 Tardiphaga alba 0.00 1 0 G 1649510 Variibacter 0.00 1 1 S 1333996 Variibacter gotjawalensis 0.00 3 0 F 119045 Methylobacteriaceae 0.00 2 2 G 186650 Microvirga 0.00 1 0 G 407 Methylobacterium 0.00 1 1 S 270351 Methylobacterium aquaticum 0.00 1 0 F 335928 Xanthobacteraceae 0.00 1 0 G 279 Xanthobacter 0.00 1 1 S 280 Xanthobacter autotrophicus 0.00 1 1 F 2831106 Devosiaceae 0.00 1 0 F 2831090 Blastochloridaceae 0.00 1 1 G 59282 Blastochloris 0.00 1 0 F 2821832 Stappiaceae 0.00 1 1 G 152161 Stappia 0.00 1 0 F 772 Bartonellaceae 0.00 1 0 G 773 Bartonella 0.00 1 0 G1 2645622 unclassified Bartonella 0.00 1 1 S 1933904 Bartonella sp. WD16.2 0.00 1 0 F 2843308 Pleomorphomonadaceae 0.00 1 0 G 1572860 Hartmannibacter 0.00 1 1 S 1482074 Hartmannibacter diazotrophicus 0.02 73 1 O 204457 Sphingomonadales 0.02 61 1 F 335929 Erythrobacteraceae 0.02 59 0 G 2800686 Tsuneonella 0.02 59 0 G1 2800703 unclassified Tsuneonella 0.02 59 59 S 3042152 Tsuneonella sp. CC-YZS046 0.00 1 0 G 2800685 Pelagerythrobacter 0.00 1 1 S 538382 Pelagerythrobacter marinus 0.00 10 2 F 41297 Sphingomonadaceae 0.00 4 3 G 165697 Sphingopyxis 0.00 1 0 G1 2614943 unclassified Sphingopyxis 0.00 1 1 S 2482763 Sphingopyxis sp. YF1 0.00 2 1 G 165696 Novosphingobium 0.00 1 1 S 2728851 Novosphingobium olei 0.00 1 0 G 13687 Sphingomonas 0.00 1 1 S 2319844 Sphingomonas paeninsulae 0.00 1 0 G 1434046 Sphingorhabdus 0.00 1 1 S 1913578 Sphingorhabdus lutea 0.00 1 0 F 2820280 Sphingosinicellaceae 0.00 1 0 G 335405 Sphingosinicella 0.00 1 1 S 335406 Sphingosinicella microcystinivorans 0.02 69 0 O 204458 Caulobacterales 0.02 69 1 F 76892 Caulobacteraceae 0.02 52 39 G 76890 Asticcacaulis 0.00 13 0 G1 2628350 unclassified Asticcacaulis 0.00 13 13 S 3157666 Asticcacaulis sp. MM231 0.00 16 13 G 41275 Brevundimonas 0.00 2 2 S 172043 Brevundimonas nasdae 0.00 1 0 G1 2622653 unclassified Brevundimonas 0.00 1 1 S 2591463 Brevundimonas sp. M20 0.02 55 40 O 204455 Rhodobacterales 0.00 12 0 F 31989 Paracoccaceae 0.00 10 0 G 2816884 Qingshengfaniella 0.00 10 10 S 2599296 Qingshengfaniella alkalisoli 0.00 1 0 G 265 Paracoccus 0.00 1 0 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.00 1 1 S 3030011 Paracoccus sp. S3-43 0.00 1 0 G 238783 Pseudorhodobacter 0.00 1 1 S 2500533 Pseudorhodobacter turbinis 0.00 3 1 F 2854170 Roseobacteraceae 0.00 1 1 G 92944 Ketogulonicigenium 0.00 1 0 G 1433986 Actibacterium 0.00 1 0 G1 2649852 unclassified Actibacterium 0.00 1 1 S 1609966 Actibacterium sp. EMB200-NS6 0.01 17 0 O 3108222 Geminicoccales 0.01 17 0 F 2066434 Geminicoccaceae 0.01 17 0 G 171436 Tistrella 0.01 17 0 S 171437 Tistrella mobilis 0.01 17 17 S1 1110502 Tistrella mobilis KA081020-065 0.00 10 0 O 1921002 Holosporales 0.00 6 0 F 1777752 Candidatus Paracaedibacteraceae 0.00 4 0 G 3163645 Candidatus Bodocaedibacter 0.00 4 4 S 2741701 Candidatus Bodocaedibacter vickermanii 0.00 2 0 G 1521255 Candidatus Paracaedibacter 0.00 2 2 S 91604 Candidatus Paracaedibacter acanthamoebae 0.00 4 0 F 44746 Holosporaceae 0.00 4 0 G 2654634 Candidatus Hydrogenosomobacter 0.00 4 4 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus 0.00 9 0 O 255473 Parvularculales 0.00 9 3 F 255474 Parvularculaceae 0.00 6 0 G 208215 Parvularcula 0.00 6 0 G1 2647080 unclassified Parvularcula 0.00 6 6 S 3067902 Parvularcula sp. IMCC14364 0.00 6 0 O 2800060 Hyphomonadales 0.00 6 0 F 69657 Hyphomonadaceae 0.00 5 5 G 85 Hyphomonas 0.00 1 0 G 2723 Hirschia 0.00 1 0 S 2724 Hirschia baltica 0.00 1 1 S1 582402 Hirschia baltica ATCC 49814 0.00 4 4 O 54526 Candidatus Pelagibacterales 0.00 3 3 O 362534 Kordiimonadales 0.00 2 0 O 1191478 Magnetococcales 0.00 2 0 F 1191479 Magnetococcaceae 0.00 2 0 G 162171 Magnetococcus 0.00 2 0 S 1124597 Magnetococcus marinus 0.00 2 2 S1 156889 Magnetococcus marinus MC-1 0.00 2 0 O 2800059 Maricaulales 0.00 2 0 F 2800061 Maricaulaceae 0.00 2 0 G 1649466 Marinicauda 0.00 2 2 S 2029849 Marinicauda algicola 0.00 1 0 O 2493627 Minwuiales 0.00 1 0 F 2493628 Minwuiaceae 0.00 1 0 G 2493629 Minwuia 0.00 1 1 G1 2618799 unclassified Minwuia 6.17 19987 824 C 1236 Gammaproteobacteria 4.09 13254 0 O 1240482 Orbales 4.09 13254 1174 F 1240483 Orbaceae 1.85 5985 0 G 1335631 Frischella 1.85 5985 5985 S 1267021 Frischella perrara 1.80 5833 0 G 2894762 Zophobihabitans 1.80 5833 5833 S 1635327 Zophobihabitans entericus 0.08 262 99 G 1193503 Gilliamella 0.05 163 150 G1 2685620 unclassified Gilliamella 0.00 13 13 S 2704654 Gilliamella sp. ESL0441 1.46 4729 301 O 91347 Enterobacterales 0.87 2816 255 F 543 Enterobacteriaceae 0.51 1668 0 G 1177214 Candidatus Profftia 0.51 1666 0 G1 2735709 unclassified Candidatus Profftia 0.51 1666 1666 S 2864218 Candidatus Profftia sp. (ex Adelges kitamiensis) 0.00 1 1 S 1177216 Candidatus Profftia tarda 0.00 1 1 S 1987921 Candidatus Profftia lariciata 0.08 243 0 G 561 Escherichia 0.07 242 239 S 562 Escherichia coli 0.00 1 1 S1 1322345 Escherichia coli ATCC 25922 0.00 1 1 S1 655817 Escherichia coli ABU 83972 0.00 1 1 S1 244320 Escherichia coli O55:H7 0.00 1 1 S 208962 Escherichia albertii 0.06 187 0 F1 2890311 Klebsiella/Raoultella group 0.06 179 6 G 570 Klebsiella 0.05 164 99 S 573 Klebsiella pneumoniae 0.02 65 13 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.02 52 52 S2 1094170 Klebsiella pneumoniae subsp. pneumoniae KPNIH10 0.00 5 5 S 548 Klebsiella aerogenes 0.00 2 1 S 244366 Klebsiella variicola 0.00 1 1 S1 640131 Klebsiella variicola At-22 0.00 1 0 S 1463165 Klebsiella quasipneumoniae 0.00 1 1 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.00 1 0 G1 2608929 unclassified Klebsiella 0.00 1 1 S 2829835 Klebsiella sp. P1954 0.00 8 0 G 160674 Raoultella 0.00 8 0 G1 2627600 unclassified Raoultella 0.00 8 8 S 2799495 Raoultella sp. XY-1 0.05 165 2 G 590 Salmonella 0.05 163 6 S 28901 Salmonella enterica 0.05 157 14 S1 59201 Salmonella enterica subsp. enterica 0.01 44 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.01 40 40 S3 1173427 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 0.00 3 3 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.00 1 1 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.01 39 39 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.01 19 19 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.00 16 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.00 16 16 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.00 8 8 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.00 6 2 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.00 2 2 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.00 2 2 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.00 4 4 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.00 2 2 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.00 1 0 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 1 1 S3 1454647 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 0.00 1 1 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.00 1 1 S2 29474 Salmonella enterica subsp. enterica serovar California 0.00 1 1 S2 440524 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 0.00 1 1 S2 98360 Salmonella enterica subsp. enterica serovar Dublin 0.04 115 0 F1 191675 Enterobacteriaceae incertae sedis 0.04 115 1 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.02 57 0 G 472825 Candidatus Purcelliella 0.02 57 57 S 472834 Candidatus Purcelliella pentastirinorum 0.01 33 0 F3 84564 ant endosymbionts 0.01 32 0 G 203804 Candidatus Blochmanniella 0.01 32 23 G1 711328 unclassified Candidatus Blochmanniella 0.00 7 7 S 2681987 Blochmannia endosymbiont of Colobopsis nipponica 0.00 2 2 S 1505596 Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 0.00 1 0 G 1699619 Candidatus Westeberhardia 0.00 1 1 S 1594731 Candidatus Westeberhardia cardiocondylae 0.01 17 0 F3 146507 aphid secondary symbionts 0.00 11 11 G 568987 Candidatus Hamiltonella 0.00 6 0 G 568988 Candidatus Regiella 0.00 6 0 G1 3077955 unclassified Candidatus Regiella 0.00 6 6 S 3077956 Candidatus Regiella endosymbiont of Tuberolachnus salignus 0.00 5 4 G 1302410 Candidatus Annandia 0.00 1 1 S 1345117 Candidatus Annandia pinicola 0.00 2 0 G 1906661 Candidatus Gullanella 0.00 2 2 S 1070130 Candidatus Gullanella endobia 0.02 59 0 G 547 Enterobacter 0.02 55 0 G1 354276 Enterobacter cloacae complex 0.01 31 31 S 158836 Enterobacter hormaechei 0.00 14 14 S 299767 Enterobacter ludwigii 0.00 6 6 S 61645 Enterobacter asburiae 0.00 2 0 G2 2757714 unclassified Enterobacter cloacae complex 0.00 2 2 S 2077136 Enterobacter cloacae complex sp. FDA-CDC-AR_0164 0.00 1 1 S 550 Enterobacter cloacae 0.00 1 1 S 208224 Enterobacter kobei 0.00 4 0 G1 2608935 unclassified Enterobacter 0.00 4 4 S 2870346 Enterobacter sp. C2 0.02 50 1 F1 36866 unclassified Enterobacteriaceae 0.01 37 37 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.00 10 10 S 2675780 Enterobacteriaceae endosymbiont of Donacia piscatrix 0.00 2 2 S 2675797 Enterobacteriaceae endosymbiont of Plateumaris sericea 0.01 42 0 G 1081630 Candidatus Schneideria 0.01 42 42 S 1081631 Candidatus Schneideria nysicola 0.01 18 0 G 544 Citrobacter 0.00 15 0 G1 1344959 Citrobacter freundii complex 0.00 9 9 S 67827 Citrobacter werkmanii 0.00 4 4 S 1748967 Citrobacter cronae 0.00 2 2 S 67828 Citrobacter gillenii 0.00 3 3 S 2971264 Citrobacter enshiensis 0.00 4 4 G 401618 Candidatus Riesia 0.00 3 0 G 409304 Candidatus Ishikawella 0.00 3 0 S 168169 Candidatus Ishikawella capsulata 0.00 3 3 S1 476281 Candidatus Ishikawaella capsulata Mpkobe 0.00 2 0 G 2815296 Jejubacter 0.00 2 2 S 2579935 Jejubacter calystegiae 0.00 2 1 G 413496 Cronobacter 0.00 1 1 S 413497 Cronobacter dublinensis 0.00 1 0 G 83654 Leclercia 0.00 1 1 G1 2627398 unclassified Leclercia 0.00 1 0 G 2726810 Scandinavium 0.00 1 1 S 1851514 Scandinavium goeteborgense 0.00 1 0 G 1903434 Atlantibacter 0.00 1 1 S 565 Atlantibacter hermannii 0.25 815 3 F 1903409 Erwiniaceae 0.24 783 0 G 32199 Buchnera 0.24 783 493 S 9 Buchnera aphidicola 0.06 193 193 S1 1965431 Buchnera aphidicola (Ceratoglyphina bambusae) 0.01 24 24 S1 3075416 Buchnera aphidicola (Takecallis taiwana) 0.01 23 23 S1 1241868 Buchnera aphidicola (Mollitrichosiphum nigrofasciatum) 0.00 13 13 S1 2315800 Buchnera aphidicola (Stegophylla sp.) 0.00 10 10 S1 2027478 Buchnera aphidicola (Periphyllus acericola) 0.00 9 9 S1 1265387 Buchnera aphidicola (Shivaphis celti) 0.00 5 5 S1 1241878 Buchnera aphidicola (Sarucallis kahawaluokalani) 0.00 4 4 S1 1921549 Buchnera aphidicola (Cinara strobi) 0.00 3 3 S1 1265366 Buchnera aphidicola (Kurisakia onigurumii) 0.00 3 3 S1 1241884 Buchnera aphidicola (Therioaphis trifolii) 0.00 1 1 S1 1265370 Buchnera aphidicola (Mindarus keteleerifoliae) 0.00 1 1 S1 2518975 Buchnera aphidicola (Cinara curvipes) 0.00 1 1 S1 2709429 Buchnera aphidicola (Periphyllus lyropictus) 0.00 13 0 G 551 Erwinia 0.00 10 10 S 1922217 Candidatus Erwinia haradaeae 0.00 3 0 G1 2622719 unclassified Erwinia 0.00 3 3 S 215689 Erwinia sp. Ejp617 0.00 12 0 G 53335 Pantoea 0.00 5 5 S 59814 Pantoea dispersa 0.00 4 4 S 66269 Pantoea stewartii 0.00 3 3 S 1235990 Candidatus Pantoea carbekii 0.00 4 0 G 82986 Tatumella 0.00 4 4 S 82987 Tatumella ptyseos 0.20 651 12 F 1903414 Morganellaceae 0.12 392 0 G 581 Morganella 0.12 392 392 S 582 Morganella morganii 0.05 161 0 G 583 Proteus 0.05 155 155 S 584 Proteus mirabilis 0.00 5 5 S 585 Proteus vulgaris 0.00 1 0 S 1574161 Proteus terrae 0.00 1 1 S1 626774 Proteus terrae subsp. cibarius 0.02 58 0 G 637 Arsenophonus 0.01 46 16 G1 2627083 unclassified Arsenophonus 0.00 13 13 S 3066235 Arsenophonus endosymbiont of Crataerina pallida 0.00 8 8 S 235559 Arsenophonus endosymbiont of Aleurodicus dispersus 0.00 7 7 S 1231049 Arsenophonus endosymbiont of Aphis craccivora 0.00 1 1 S 634121 Arsenophonus symbiont of Ornithomya chloropus 0.00 1 1 S 3041619 Arsenophonus sp. aPb 0.00 11 11 S 638 Arsenophonus nasoniae 0.00 1 1 S 634113 Candidatus Arsenophonus lipoptenae 0.01 20 0 G 29487 Photorhabdus 0.01 20 20 S 171438 Photorhabdus akhurstii 0.00 7 3 G 586 Providencia 0.00 2 2 S 333962 Providencia heimbachae 0.00 1 1 S 1715285 Candidatus Providencia siddallii 0.00 1 0 G1 2633465 unclassified Providencia 0.00 1 1 S 2936792 Providencia sp. PROV170 0.00 1 0 G 626 Xenorhabdus 0.00 1 1 S 628 Xenorhabdus nematophila 0.02 75 0 F 2812006 Bruguierivoracaceae 0.02 75 0 G 84565 Sodalis 0.02 65 65 S 2697027 Sodalis ligni 0.00 9 0 S 1486991 Candidatus Sodalis pierantonius 0.00 9 9 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.00 1 0 G1 2636512 unclassified Sodalis 0.00 1 1 S 1929246 Sodalis endosymbiont of Henestaris halophilus 0.01 34 2 F 1903410 Pectobacteriaceae 0.01 29 1 G 122277 Pectobacterium 0.01 24 24 S 1905730 Pectobacterium parmentieri 0.00 2 2 S 180957 Pectobacterium brasiliense 0.00 2 2 S 2485124 Pectobacterium polonicum 0.00 2 0 G 204037 Dickeya 0.00 2 2 S 1089444 Dickeya solani 0.00 1 0 G 1082702 Lonsdalea 0.00 1 1 S 1172565 Lonsdalea populi 0.01 31 1 F 1903411 Yersiniaceae 0.01 17 1 G 613 Serratia 0.00 8 1 S 82996 Serratia plymuthica 0.00 7 7 S1 1006598 Serratia plymuthica RVH1 0.00 7 7 S 61652 Serratia rubidaea 0.00 1 1 S 138074 Serratia symbiotica 0.00 12 12 G 1927833 Candidatus Fukatsuia 0.00 1 0 G 629 Yersinia 0.00 1 0 G1 1649845 Yersinia pseudotuberculosis complex 0.00 1 0 S 632 Yersinia pestis 0.00 1 1 S1 748678 Yersinia pestis str. Pestoides B 0.00 4 2 F 1903416 Budviciaceae 0.00 2 0 G 82980 Leminorella 0.00 2 2 S 82981 Leminorella grimontii 0.00 1 0 F 1903412 Hafniaceae 0.00 1 0 G 635 Edwardsiella 0.00 1 1 S 636 Edwardsiella tarda 0.00 1 0 F 3120698 Gallaecimonadaceae 0.00 1 0 G 745410 Gallaecimonas 0.00 1 1 S 3029055 Gallaecimonas kandeliae 0.12 388 9 O 72274 Pseudomonadales 0.08 275 7 F 135621 Pseudomonadaceae 0.05 170 33 G 286 Pseudomonas 0.02 64 0 G1 136841 Pseudomonas aeruginosa group 0.02 63 62 S 287 Pseudomonas aeruginosa 0.00 1 1 S1 381754 Pseudomonas aeruginosa PA7 0.00 1 1 S 53408 Pseudomonas citronellolis 0.01 39 2 G1 196821 unclassified Pseudomonas 0.01 24 24 S 2762896 Pseudomonas sp. MPDS 0.00 5 5 S 2895472 Pseudomonas sp. B21-012 0.00 3 3 S 2954088 Pseudomonas sp. FP2262 0.00 2 2 S 1027966 Pseudomonas sp. HR96 0.00 1 1 S 1981174 Pseudomonas sp. M30-35 0.00 1 1 S 3020843 Pseudomonas sp. Q1-7 0.00 1 1 S 2954080 Pseudomonas sp. FP1762 0.00 7 7 S 437900 Pseudomonas marincola 0.00 7 5 G1 136849 Pseudomonas syringae group 0.00 2 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.00 2 0 S 317 Pseudomonas syringae 0.00 2 0 S1 264449 Pseudomonas syringae group pathovars incertae sedis 0.00 2 2 S2 103796 Pseudomonas syringae pv. actinidiae 0.00 6 0 G1 136845 Pseudomonas putida group 0.00 6 6 S 78327 Pseudomonas mosselii 0.00 5 0 G1 136843 Pseudomonas fluorescens group 0.00 2 2 S 47878 Pseudomonas azotoformans 0.00 2 2 S 200452 Pseudomonas congelans 0.00 1 1 S 200450 Pseudomonas trivialis 0.00 3 3 S 46677 Pseudomonas agarici 0.00 2 2 S 2762576 Pseudomonas baltica 0.00 1 0 G1 136842 Pseudomonas chlororaphis group 0.00 1 1 S 296 Pseudomonas fragi 0.00 1 1 S 2738125 Pseudomonas hefeiensis 0.00 1 1 S 216142 Pseudomonas rhizosphaerae 0.00 1 1 S 2961893 Pseudomonas triclosanedens 0.03 94 0 G 1654787 Thiopseudomonas 0.03 94 94 S 1697053 Thiopseudomonas alkaliphila 0.00 3 0 G 2901164 Stutzerimonas 0.00 3 0 G1 136846 Stutzerimonas stutzeri group 0.00 2 0 G2 578833 Stutzerimonas stutzeri subgroup 0.00 2 2 S 316 Stutzerimonas stutzeri 0.00 1 1 S 2968969 Stutzerimonas frequens 0.00 1 0 F1 351 Azotobacter group 0.00 1 1 G 352 Azotobacter 0.03 104 0 F 2887365 Marinobacteraceae 0.03 104 103 G 2742 Marinobacter 0.00 1 0 G1 83889 unclassified Marinobacter 0.00 1 1 S 2817656 Marinobacter sp. CA1 0.06 187 3 O 135619 Oceanospirillales 0.04 121 0 F 2823145 Pleioneaceae 0.04 121 0 G 1502941 Pleionea 0.04 121 121 S 3070815 Pleionea litopenaei 0.01 24 6 F 28256 Halomonadaceae 0.00 16 0 F1 114403 Zymobacter group 0.00 10 0 G 33073 Zymobacter 0.00 10 10 S 33074 Zymobacter palmae 0.00 5 0 G 235572 Candidatus Portiera 0.00 5 5 S 91844 Candidatus Portiera aleyrodidarum 0.00 1 0 G 114185 Candidatus Carsonella 0.00 1 1 S 114186 Candidatus Carsonella ruddii 0.00 1 0 G 376488 Halotalea 0.00 1 1 S 376489 Halotalea alkalilenta 0.00 1 1 G 504090 Kushneria 0.01 21 1 F 135620 Oceanospirillaceae 0.00 8 0 G 3018276 Aliamphritea 0.00 8 8 S 1524258 Aliamphritea ceti 0.00 3 1 G 75687 Neptunomonas 0.00 2 0 S 417574 Neptunomonas japonica 0.00 2 2 S1 1441457 Neptunomonas japonica JAMM 1380 0.00 3 0 G 267849 Nitrincola 0.00 3 3 S 2614693 Nitrincola iocasae 0.00 2 1 G 28253 Marinomonas 0.00 1 1 S 119864 Marinomonas mediterranea 0.00 2 2 G 187492 Thalassolituus 0.00 1 0 G 48075 Marinobacterium 0.00 1 0 G1 2644139 unclassified Marinobacterium 0.00 1 1 S 2668067 Marinobacterium sp. LSUCC0821 0.00 1 0 G 2893036 Venatoribacter 0.00 1 1 S 2661630 Venatoribacter cucullus 0.00 7 0 F 224379 Hahellaceae 0.00 7 5 G 158481 Hahella 0.00 1 0 S 158327 Hahella chejuensis 0.00 1 1 S1 349521 Hahella chejuensis KCTC 2396 0.00 1 1 G1 2624107 unclassified Hahella 0.00 4 0 F 224372 Alcanivoracaceae 0.00 2 2 G 59753 Alcanivorax 0.00 2 2 G 3020832 Alloalcanivorax 0.00 3 0 F 255527 Saccharospirillaceae 0.00 2 0 G 231683 Saccharospirillum 0.00 2 2 S 2161747 Saccharospirillum mangrovi 0.00 1 0 G 230494 Reinekea 0.00 1 1 S 1336806 Reinekea forsetii 0.00 3 0 F 2066474 Endozoicomonadaceae 0.00 3 2 G 305899 Endozoicomonas 0.00 1 0 G1 2644528 unclassified Endozoicomonas 0.00 1 1 S 3009078 Endozoicomonas sp. GU-1 0.00 1 0 F 449732 Litorivicinaceae 0.00 1 0 G 418700 Litorivicinus 0.00 1 1 S 418701 Litorivicinus lipolyticus 0.03 100 0 O 135623 Vibrionales 0.03 100 11 F 641 Vibrionaceae 0.03 82 9 G 662 Vibrio 0.01 27 5 G1 2614977 unclassified Vibrio 0.00 12 12 S 2661921 Vibrio sp. THAF191c 0.00 10 10 S 2661922 Vibrio sp. THAF191d 0.01 20 20 S 666 Vibrio cholerae 0.00 15 1 G1 717610 Vibrio harveyi group 0.00 11 11 S 669 Vibrio harveyi 0.00 3 1 S 670 Vibrio parahaemolyticus 0.00 1 1 S1 745023 Vibrio parahaemolyticus 10329 0.00 1 1 S1 1429044 Vibrio parahaemolyticus UCM-V493 0.00 3 3 S 2572923 Vibrio taketomensis 0.00 2 0 G1 87806 environmental samples 0.00 2 2 S 114054 uncultured Vibrio sp. 0.00 2 2 S 2587862 Vibrio aquimaris 0.00 1 0 S 52443 Vibrio tapetis 0.00 1 1 S1 1671868 Vibrio tapetis subsp. tapetis 0.00 1 1 S 29495 Vibrio navarrensis 0.00 1 1 S 673372 Vibrio casei 0.00 1 1 S 674 Vibrio mimicus 0.00 6 0 G 657 Photobacterium 0.00 5 0 S 38293 Photobacterium damselae 0.00 5 5 S1 85581 Photobacterium damselae subsp. damselae 0.00 1 1 S 553611 Photobacterium leiognathi 0.00 1 0 G 188143 Enterovibrio 0.00 1 1 S 1927128 Candidatus Enterovibrio luxaltus 0.02 70 13 O 135622 Alteromonadales 0.01 34 1 F 72275 Alteromonadaceae 0.01 28 0 G 1751872 Lacimicrobium 0.01 28 28 S 1526571 Lacimicrobium alkaliphilum 0.00 3 0 G 2894574 Saccharobesus 0.00 3 3 S 2172099 Saccharobesus litoralis 0.00 2 0 F1 2903219 Alteromonas/Salinimonas group 0.00 2 0 G 226 Alteromonas 0.00 2 2 S 589873 Alteromonas australica 0.00 6 0 F 267890 Shewanellaceae 0.00 4 0 G 2547964 Parashewanella 0.00 4 4 S 2547970 Parashewanella tropica 0.00 2 1 G 22 Shewanella 0.00 1 1 S 62322 Shewanella baltica 0.00 5 0 F 267891 Moritellaceae 0.00 5 0 G 58050 Moritella 0.00 3 0 S 90736 Moritella marina 0.00 3 3 S1 1202962 Moritella marina ATCC 15381 0.00 2 0 G1 2637987 unclassified Moritella 0.00 2 2 S 2746231 Moritella sp. 5 0.00 4 0 F 267889 Colwelliaceae 0.00 4 1 G 1518149 Thalassotalea 0.00 2 0 G1 2614972 unclassified Thalassotalea 0.00 2 2 S 2769490 Thalassotalea sp. LPB0316 0.00 1 1 S 1230533 Thalassotalea piscium 0.00 3 0 F 267892 Ferrimonadaceae 0.00 3 0 G 44011 Ferrimonas 0.00 3 3 G1 2620587 unclassified Ferrimonas 0.00 2 0 F 267888 Pseudoalteromonadaceae 0.00 1 1 G 53246 Pseudoalteromonas 0.00 1 0 G 2834759 Flocculibacter 0.00 1 1 S 2744479 Flocculibacter collagenilyticus 0.00 2 1 F 267893 Idiomarinaceae 0.00 1 0 G 135575 Idiomarina 0.00 1 0 G1 2614829 unclassified Idiomarina 0.00 1 1 S 2055892 Idiomarina sp. X4 0.00 1 0 F 267894 Psychromonadaceae 0.00 1 0 G 67572 Psychromonas 0.00 1 0 G1 2614957 unclassified Psychromonas 0.00 1 1 S 314282 Psychromonas sp. CNPT3 0.02 61 0 O 2887326 Moraxellales 0.02 61 1 F 468 Moraxellaceae 0.02 52 17 G 469 Acinetobacter 0.01 17 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.00 10 9 S 470 Acinetobacter baumannii 0.00 1 1 S1 1279013 Acinetobacter baumannii PR07 0.00 7 6 S 48296 Acinetobacter pittii 0.00 1 1 S1 871585 Acinetobacter pittii PHEA-2 0.00 11 11 S 202956 Acinetobacter towneri 0.00 4 0 G1 196816 unclassified Acinetobacter 0.00 4 4 S 3151496 Acinetobacter sp. ANC 7955 0.00 2 2 S 29430 Acinetobacter haemolyticus 0.00 1 1 S 106648 Acinetobacter bereziniae 0.00 6 0 G 475 Moraxella 0.00 4 0 G1 2685852 unclassified Moraxella 0.00 4 4 S 2904123 Moraxella sp. ZY210820 0.00 2 2 S 90241 Moraxella lincolnii 0.00 2 2 G 497 Psychrobacter 0.02 55 1 O 135613 Chromatiales 0.01 42 5 F 1046 Chromatiaceae 0.00 14 1 G 85072 Allochromatium 0.00 13 13 S 553982 Allochromatium tepidum 0.00 5 5 G 1056 Thiocapsa 0.00 5 1 G 2796146 Candidatus Nitrosacidococcus 0.00 3 0 G1 2942907 unclassified Candidatus Nitrosacidococcus 0.00 3 3 S 2942908 Candidatus Nitrosacidococcus sp. I8 0.00 1 1 S 553981 Candidatus Nitrosacidococcus tergens 0.00 4 0 G 85073 Thermochromatium 0.00 4 0 S 1050 Thermochromatium tepidum 0.00 4 4 S1 316276 Thermochromatium tepidum ATCC 43061 0.00 3 0 G 2828366 Caldichromatium 0.00 3 3 S 2699430 Caldichromatium japonicum 0.00 2 2 G 1227 Nitrosococcus 0.00 2 0 G 67575 Rheinheimera 0.00 2 0 G1 115860 unclassified Rheinheimera 0.00 2 2 S 3019969 Rheinheimera sp. MM224 0.00 1 1 G 61593 Thiorhodovibrio 0.00 1 0 G 1980513 Candidatus Nitrosoglobus 0.00 1 1 S 1630141 Candidatus Nitrosoglobus terrae 0.00 5 0 F 72276 Ectothiorhodospiraceae 0.00 3 3 G 1335745 Spiribacter 0.00 2 2 G 1765964 Acidihalobacter 0.00 5 0 F 2035710 Thioalkalibacteraceae 0.00 5 0 G 2035712 Guyparkeria 0.00 5 5 S 47960 Guyparkeria halophila 0.00 1 0 F 449719 Granulosicoccaceae 0.00 1 0 G 437504 Granulosicoccus 0.00 1 0 S 437505 Granulosicoccus antarcticus 0.00 1 1 S1 1192854 Granulosicoccus antarcticus IMCC3135 0.00 1 0 F 3067276 Sedimenticolaceae 0.00 1 0 G 393764 Candidatus Endoriftia 0.00 1 1 S 393765 Candidatus Endoriftia persephone 0.02 50 0 O 135615 Cardiobacteriales 0.01 48 5 F 868 Cardiobacteriaceae 0.01 33 0 G 13275 Suttonella 0.01 33 0 G1 2908647 unclassified Suttonella 0.01 33 33 S 2908648 Suttonella sp. R2A3 0.00 5 0 G 869 Dichelobacter 0.00 5 5 S 870 Dichelobacter nodosus 0.00 5 2 G 2717 Cardiobacterium 0.00 3 0 G1 2648856 unclassified Cardiobacterium 0.00 3 3 S 2866573 Cardiobacterium sp. Marseille-Q4385 0.00 2 0 F 3018589 Ignatzschineriaceae 0.00 2 0 G 582472 Wohlfahrtiimonas 0.00 2 2 S 400946 Wohlfahrtiimonas chitiniclastica 0.02 49 2 C1 118884 Gammaproteobacteria incertae sedis 0.01 40 0 F 3119552 Candidatus Azoamicaceae 0.01 40 0 G 2817383 Candidatus Azoamicus 0.01 40 40 S 2652803 Candidatus Azoamicus ciliaticola 0.00 3 0 G 1076625 Candidatus Steffania 0.00 3 3 S 1076626 Candidatus Steffania adelgidicola 0.00 2 0 G 204619 Candidatus Nardonella 0.00 2 2 S 1972134 endosymbiont of Sipalinus gigas 0.00 1 0 G 198346 Candidatus Palibaumannia 0.00 1 1 S 186490 Candidatus Palibaumannia cicadellinicola 0.00 1 0 G 2738850 Candidatus Reidiella 0.00 1 1 S 2738883 Candidatus Reidiella endopervernicosa 0.01 46 2 O 135614 Lysobacterales 0.01 37 2 F 32033 Lysobacteraceae 0.01 17 0 G 338 Xanthomonas 0.00 16 16 S 29447 Xanthomonas albilineans 0.00 1 0 S 339 Xanthomonas campestris 0.00 1 1 S1 340 Xanthomonas campestris pv. campestris 0.00 9 7 G 40323 Stenotrophomonas 0.00 2 2 S 216778 Stenotrophomonas rhizophila 0.00 7 6 G 68 Lysobacter 0.00 1 1 S 2795387 Lysobacter arenosi 0.00 1 0 G 2370 Xylella 0.00 1 1 S 2371 Xylella fastidiosa 0.00 1 0 G 2709666 Pseudolysobacter 0.00 1 1 S 2511995 Pseudolysobacter antarcticus 0.00 7 5 F 1775411 Rhodanobacteraceae 0.00 2 0 G 231454 Dyella 0.00 2 0 G1 2634549 unclassified Dyella 0.00 1 1 S 2501295 Dyella sp. M7H15-1 0.00 1 1 S 2994496 Dyella sp. GSA-30 0.01 37 0 O 135618 Methylococcales 0.01 37 1 F 403 Methylococcaceae 0.00 15 0 G 1295378 Methylogaea 0.00 15 15 S 1295382 Methylogaea oryzae 0.00 11 0 G 1808977 Candidatus Methylospira 0.00 11 11 S 1808979 Candidatus Methylospira mobilis 0.00 3 3 G 413 Methylococcus 0.00 3 0 G 762296 Methylovulum 0.00 3 3 S 1704499 Methylovulum psychrotolerans 0.00 2 0 G 416 Methylomonas 0.00 1 0 G1 2608980 unclassified Methylomonas 0.00 1 1 S 3040943 Methylomonas sp. UP202 0.00 1 1 S 3058963 Methylomonas montana 0.00 1 1 G 73778 Methylocaldum 0.00 1 0 G 1760987 Methylomagnum 0.00 1 1 S 1760988 Methylomagnum ishizawai 0.01 28 0 O 118969 Legionellales 0.01 18 2 F 444 Legionellaceae 0.00 16 9 G 445 Legionella 0.00 3 3 S 1867846 Legionella clemsonensis 0.00 2 0 S 446 Legionella pneumophila 0.00 2 2 S1 91891 Legionella pneumophila subsp. pneumophila 0.00 1 1 S 449 Legionella hackeliae 0.00 1 1 S 28087 Legionella sainthelensi 0.00 10 4 F 118968 Coxiellaceae 0.00 3 0 G 254245 Aquicella 0.00 2 2 S 254246 Aquicella lusitana 0.00 1 1 S 254247 Aquicella siphonis 0.00 2 0 G 776 Coxiella 0.00 1 1 S 777 Coxiella burnetii 0.00 1 0 G1 2676648 unclassified Coxiella (in: g-proteobacteria) 0.00 1 1 S 1656159 Coxiella endosymbiont of Dermacentor marginatus 0.00 1 0 F1 134284 unclassified Coxiellaceae 0.00 1 1 S 1592897 Coxiella-like endosymbiont 0.01 28 0 O 1706369 Cellvibrionales 0.00 12 5 F 1706372 Halieaceae 0.00 2 0 G 2847769 Aequoribacter 0.00 2 2 S 2518989 Aequoribacter fuscus 0.00 2 0 G 3040948 Candidatus Paraluminiphilus 0.00 2 2 S 2518994 Candidatus Paraluminiphilus aquimaris 0.00 1 0 G 393661 Congregibacter 0.00 1 0 S 393662 Congregibacter litoralis 0.00 1 1 S1 314285 Congregibacter litoralis KT71 0.00 1 0 G 1217416 Halioglobus 0.00 1 1 S 930805 Halioglobus japonicus 0.00 1 0 G 2678529 Kineobactrum 0.00 1 1 S 2708301 Kineobactrum salinum 0.00 11 0 F 1706371 Cellvibrionaceae 0.00 10 6 G 447467 Simiduia 0.00 2 0 S 447471 Simiduia agarivorans 0.00 2 2 S1 1117647 Simiduia agarivorans SA1 = DSM 21679 0.00 2 0 G1 2639280 unclassified Simiduia 0.00 2 2 S 2909669 Simiduia sp. 21SJ11W-1 0.00 1 0 G 2425 Teredinibacter 0.00 1 0 G1 2648457 unclassified Teredinibacter 0.00 1 1 S 3034506 Teredinibacter sp. KSP-S5-2 0.00 5 0 F 1706375 Spongiibacteraceae 0.00 3 0 G 1084558 Oceanicoccus 0.00 3 3 S 716816 Oceanicoccus sagamiensis 0.00 2 0 G 630749 Spongiibacter 0.00 2 2 S 1748242 Spongiibacter taiwanensis 0.01 24 0 O 72273 Thiotrichales 0.00 12 0 F 135617 Thiotrichaceae 0.00 11 10 G 1030 Thiothrix 0.00 1 1 S 2735563 Thiothrix subterranea 0.00 1 0 G 1021 Beggiatoa 0.00 1 1 S 288004 Beggiatoa leptomitoformis 0.00 10 1 F 135616 Piscirickettsiaceae 0.00 5 0 G 1237 Piscirickettsia 0.00 5 5 S 1238 Piscirickettsia salmonis 0.00 3 3 G 34067 Cycloclasticus 0.00 1 0 G 2781121 Thiosulfatimonas 0.00 1 1 S 2675054 Thiosulfatimonas sediminis 0.00 2 0 F 34064 Francisellaceae 0.00 2 0 G 262 Francisella 0.00 1 0 S 263 Francisella tularensis 0.00 1 1 S1 119856 Francisella tularensis subsp. tularensis 0.00 1 1 S 2249302 Francisella marina 0.01 20 0 O 135624 Aeromonadales 0.01 18 0 F 84642 Aeromonadaceae 0.00 13 9 G 642 Aeromonas 0.00 3 3 S 652 Aeromonas schubertii 0.00 1 1 S 644 Aeromonas hydrophila 0.00 3 0 G 225143 Oceanisphaera 0.00 3 3 S 1903694 Oceanisphaera avium 0.00 2 0 G 2802288 Dongshaea 0.00 2 2 S 2047966 Dongshaea marina 0.00 2 0 F 83763 Succinivibrionaceae 0.00 2 0 G 83770 Succinivibrio 0.00 2 2 S 83771 Succinivibrio dextrinosolvens 0.01 17 0 O 135625 Pasteurellales 0.01 17 2 F 712 Pasteurellaceae 0.00 4 1 G 724 Haemophilus 0.00 3 3 S 727 Haemophilus influenzae 0.00 3 2 G 745 Pasteurella 0.00 1 0 S 747 Pasteurella multocida 0.00 1 1 S1 115545 Pasteurella multocida subsp. septica 0.00 3 0 G 713 Actinobacillus 0.00 3 0 S 718 Actinobacillus equuli 0.00 3 3 S1 202948 Actinobacillus equuli subsp. haemolyticus 0.00 1 0 G 2094023 Glaesserella 0.00 1 0 G1 2629322 unclassified Glaesserella 0.00 1 1 S 2030797 Glaesserella sp. 15-184 0.00 1 0 G 155493 Gallibacterium 0.00 1 1 S 505341 Gallibacterium salpingitidis 0.00 1 0 G 1520333 Vespertiliibacter 0.00 1 1 S 1443036 Vespertiliibacter pulmonis 0.00 1 0 G 1249016 Otariodibacter 0.00 1 1 S 1032623 Otariodibacter oris 0.00 1 1 G 697331 Basfia 0.00 8 0 O 2887327 Kangiellales 0.00 8 0 F 1920240 Kangiellaceae 0.00 8 7 G 261963 Kangiella 0.00 1 1 S 1144748 Kangiella sediminilitoris 0.00 6 0 O 3085109 Thiohalobacterales 0.00 6 0 F 3085110 Thiohalobacteraceae 0.00 6 6 G 1273155 Thiohalobacter 0.00 3 0 O 1692040 Acidiferrobacterales 0.00 3 1 F 1692041 Acidiferrobacteraceae 0.00 1 1 G 986106 Acidiferrobacter 0.00 1 0 G 1744881 Sulfuricaulis 0.00 1 1 S 1620215 Sulfuricaulis limicola 0.00 2 0 O 3084968 Thiohalomonadales 0.00 2 0 F 3084969 Thiohalomonadaceae 0.00 2 0 G 2034504 Sulfurivermis 0.00 2 2 S 1972068 Sulfurivermis fontis 0.00 1 0 O 1775403 Nevskiales 0.00 1 0 F 568386 Nevskiaceae 0.00 1 0 G 2893022 Flagellatimonas 0.00 1 1 S 2806210 Flagellatimonas centrodinii 0.04 134 26 C 28216 Betaproteobacteria 0.02 76 10 O 80840 Burkholderiales 0.01 25 5 F 80864 Comamonadaceae 0.00 10 1 G 283 Comamonas 0.00 5 5 S 1082851 Comamonas serinivorans 0.00 3 3 S 2743470 Comamonas antarctica 0.00 1 1 S 285 Comamonas testosteroni 0.00 3 0 G 219181 Ottowia 0.00 3 0 G1 2645081 unclassified Ottowia 0.00 3 3 S 1658672 Ottowia sp. oral taxon 894 0.00 2 2 G 47420 Hydrogenophaga 0.00 1 1 G 28065 Rhodoferax 0.00 1 0 G 52972 Polaromonas 0.00 1 1 S 37448 Polaromonas vacuolata 0.00 1 1 G 80865 Delftia 0.00 1 1 G 238749 Diaphorobacter 0.00 1 0 G 364316 Verminephrobacter 0.00 1 0 S 364317 Verminephrobacter eiseniae 0.00 1 1 S1 391735 Verminephrobacter eiseniae EF01-2 0.01 21 2 F 119060 Burkholderiaceae 0.00 11 0 G 32008 Burkholderia 0.00 10 0 G1 87882 Burkholderia cepacia complex 0.00 5 5 S 152500 Burkholderia dolosa 0.00 3 3 S 87883 Burkholderia multivorans 0.00 1 1 S 95485 Burkholderia stabilis 0.00 1 1 S 292 Burkholderia cepacia 0.00 1 0 G1 111527 pseudomallei group 0.00 1 1 S 28450 Burkholderia pseudomallei 0.00 5 0 G 48736 Ralstonia 0.00 5 0 G1 3116862 Ralstonia solanacearum species complex 0.00 5 5 S 305 Ralstonia solanacearum 0.00 2 0 G 47670 Lautropia 0.00 2 2 S 47671 Lautropia mirabilis 0.00 1 0 G 106589 Cupriavidus 0.00 1 1 S 164546 Cupriavidus taiwanensis 0.00 9 3 F 995019 Sutterellaceae 0.00 4 0 G 40544 Sutterella 0.00 4 4 S 40545 Sutterella wadsworthensis 0.00 2 0 G 1918598 Turicimonas 0.00 2 2 S 1796652 Turicimonas muris 0.00 4 3 F 75682 Oxalobacteraceae 0.00 1 0 F1 2895353 Telluria group 0.00 1 0 G 149698 Massilia 0.00 1 1 S 457921 Massilia varians 0.00 3 0 F 2975441 Sphaerotilaceae 0.00 2 1 G 196013 Caldimonas 0.00 1 1 S 376175 Schlegelella aquatica 0.00 1 1 G 93681 Roseateles 0.00 2 0 F 506 Alcaligenaceae 0.00 1 0 G 222 Achromobacter 0.00 1 1 S 217204 Achromobacter insolitus 0.00 1 0 G 305976 Pusillimonas 0.00 1 0 G1 2640016 unclassified Pusillimonas 0.00 1 1 S 2716226 Pusillimonas sp. DMV24BSW_D 0.00 2 0 O1 224471 Burkholderiales genera incertae sedis 0.00 2 0 G 114248 Tepidimonas 0.00 2 2 S 307486 Tepidimonas taiwanensis 0.00 15 0 O 32003 Nitrosomonadales 0.00 7 0 F 206379 Nitrosomonadaceae 0.00 7 7 G 914 Nitrosomonas 0.00 5 4 F 32011 Methylophilaceae 0.00 1 0 G 16 Methylophilus 0.00 1 1 S 17 Methylophilus methylotrophus 0.00 2 0 F 2008790 Thiobacillaceae 0.00 2 0 G 1938335 Sulfuritortus 0.00 2 2 S 1914471 Sulfuritortus calidifontis 0.00 1 0 F 2008793 Sterolibacteriaceae 0.00 1 0 G 3050898 Sulfuricystis 0.00 1 1 S 2211108 Sulfuricystis multivorans 0.00 14 2 O 206351 Neisseriales 0.00 7 2 F 481 Neisseriaceae 0.00 3 2 G 482 Neisseria 0.00 1 1 S 485 Neisseria gonorrhoeae 0.00 2 0 G 71 Simonsiella 0.00 2 2 S 72 Simonsiella muelleri 0.00 3 0 F 2897176 Aquaspirillaceae 0.00 2 0 G 57479 Microvirgula 0.00 2 2 S 57480 Microvirgula aerodenitrificans 0.00 1 0 G 168470 Laribacter 0.00 1 1 S 168471 Laribacter hongkongensis 0.00 1 0 F 1499392 Chromobacteriaceae 0.00 1 1 G 535 Chromobacterium 0.00 1 1 F 2897177 Chitinibacteraceae 0.00 2 0 O 206389 Rhodocyclales 0.00 1 0 F 75787 Rhodocyclaceae 0.00 1 0 G 1769726 Niveibacterium 0.00 1 1 S 2811415 Niveibacterium microcysteis 0.00 1 0 F 2008794 Zoogloeaceae 0.00 1 0 G 2891294 Nitrogeniibacter 0.00 1 1 S 2815343 Nitrogeniibacter aestuarii 0.00 1 0 C1 119066 Betaproteobacteria incertae sedis 0.00 1 0 G 1381133 Candidatus Profftella 0.00 1 1 S 669502 Candidatus Profftella armatura 0.00 1 0 C 1807140 Acidithiobacillia 0.00 1 0 O 225057 Acidithiobacillales 0.00 1 0 F 225058 Acidithiobacillaceae 0.00 1 1 G 119977 Acidithiobacillus 0.01 33 0 D1 1783270 FCB group 0.01 33 0 D2 68336 Bacteroidota/Chlorobiota group 0.01 33 0 P 976 Bacteroidota 0.01 26 0 C 200643 Bacteroidia 0.01 25 0 O 171549 Bacteroidales 0.01 20 0 F 815 Bacteroidaceae 0.01 19 0 G 816 Bacteroides 0.01 19 19 S 817 Bacteroides fragilis 0.00 1 0 G 909656 Phocaeicola 0.00 1 1 S 357276 Phocaeicola dorei 0.00 4 2 F 171552 Prevotellaceae 0.00 2 0 G 838 Prevotella 0.00 1 1 S 28131 Prevotella intermedia 0.00 1 1 S 28137 Prevotella veroralis 0.00 1 0 F 171551 Porphyromonadaceae 0.00 1 0 G 836 Porphyromonas 0.00 1 0 S 28123 Porphyromonas asaccharolytica 0.00 1 1 S1 879243 Porphyromonas asaccharolytica DSM 20707 0.00 1 0 O 1970189 Marinilabiliales 0.00 1 0 F 1471398 Prolixibacteraceae 0.00 1 0 G 1471399 Draconibacterium 0.00 1 0 G1 1573822 environmental samples 0.00 1 1 S 1573823 uncultured Draconibacterium sp. 0.00 4 0 C 768503 Cytophagia 0.00 4 1 O 768507 Cytophagales 0.00 1 0 F 89373 Cytophagaceae 0.00 1 0 G 107 Spirosoma 0.00 1 1 S 2666025 Spirosoma endbachense 0.00 1 0 F 1853234 Persicobacteraceae 0.00 1 0 G 1434007 Fulvitalea 0.00 1 1 S 1182444 Fulvitalea axinellae 0.00 1 0 F 2896860 Spirosomataceae 0.00 1 0 G 105 Runella 0.00 1 0 G1 2631759 unclassified Runella 0.00 1 1 S 2268026 Runella sp. SP2 0.00 3 0 C 117743 Flavobacteriia 0.00 3 0 O 200644 Flavobacteriales 0.00 3 0 F 2762318 Weeksellaceae 0.00 3 0 F1 2782232 Chryseobacterium group 0.00 3 2 G 59732 Chryseobacterium 0.00 1 1 S 2929800 Chryseobacterium suipulveris 0.00 7 0 P 200940 Thermodesulfobacteriota 0.00 4 1 C 3031651 Desulfuromonadia 0.00 3 0 O 3031668 Geobacterales 0.00 3 1 F 213422 Geobacteraceae 0.00 2 2 G 28231 Geobacter 0.00 1 0 C 67799 Thermodesulfobacteria 0.00 1 1 O 188710 Thermodesulfobacteriales 0.00 1 0 C 3024408 Syntrophobacteria 0.00 1 0 O 213462 Syntrophobacterales 0.00 1 0 F 213465 Syntrophobacteraceae 0.00 1 0 G 361106 Desulfoglaeba 0.00 1 0 S 361111 Desulfoglaeba alkanexedens 0.00 1 1 S1 980445 Desulfoglaeba alkanexedens ALDC 0.00 1 0 C 3031451 Desulfobulbia 0.00 1 1 O 3024411 Desulfobulbales 0.00 5 0 P 29547 Campylobacterota 0.00 5 0 C 3031852 Epsilonproteobacteria 0.00 5 0 O 213849 Campylobacterales 0.00 3 0 F 72294 Campylobacteraceae 0.00 3 0 G 194 Campylobacter 0.00 3 3 S 76517 Campylobacter hominis 0.00 2 2 F 2808963 Arcobacteraceae 0.00 5 0 D1 1783257 PVC group 0.00 3 0 P 203682 Planctomycetota 0.00 2 0 C 203683 Planctomycetia 0.00 2 0 O 2691354 Pirellulales 0.00 2 0 F 2691359 Lacipirellulaceae 0.00 2 0 G 1400386 Bythopirellula 0.00 2 2 S 1400387 Bythopirellula goksoeyrii 0.00 1 0 C 666505 Phycisphaerae 0.00 1 0 O 2483366 Sedimentisphaerales 0.00 1 0 F 2690158 Anaerohalosphaeraceae 0.00 1 0 G 2690159 Anaerohalosphaera 0.00 1 1 S 1936003 Anaerohalosphaera lusitana 0.00 1 0 P 204428 Chlamydiota 0.00 1 0 C 204429 Chlamydiia 0.00 1 1 O 1963360 Parachlamydiales 0.00 1 0 P 256845 Lentisphaerota 0.00 1 0 C 1313211 Lentisphaeria 0.00 1 0 O 278081 Lentisphaerales 0.00 1 0 F 566277 Lentisphaeraceae 0.00 1 0 G 256846 Lentisphaera 0.00 1 1 S 1658616 Lentisphaera profundi 0.00 4 0 D1 2323 Bacteria incertae sedis 0.00 4 0 D2 1783234 Bacteria candidate phyla 0.00 4 2 P 95818 Candidatus Saccharibacteria 0.00 1 0 C 2093818 Candidatus Saccharimonadia 0.00 1 0 O 2093819 Candidatus Nanosynbacterales 0.00 1 0 F 2093822 Candidatus Nanosynbacteraceae 0.00 1 1 G 2093823 Candidatus Nanosynbacter 0.00 1 0 G 2831665 Candidatus Mycosynbacter 0.00 1 1 S 2665156 Candidatus Mycosynbacter amalyticus 0.00 2 0 P 3018035 Bdellovibrionota 0.00 1 0 C 3031418 Bdellovibrionia 0.00 1 0 O 213481 Bdellovibrionales 0.00 1 0 F 213483 Pseudobdellovibrionaceae 0.00 1 0 G 213485 Micavibrio 0.00 1 0 S 349221 Micavibrio aeruginosavorus 0.00 1 1 S1 349215 Micavibrio aeruginosavorus EPB 0.00 1 0 C 3031419 Bacteriovoracia 0.00 1 0 O 2024979 Bacteriovoracales 0.00 1 0 F 263369 Bacteriovoracaceae 0.00 1 0 G 146784 Bacteriovorax 0.00 1 1 S 960 Bacteriovorax stolpii 0.00 2 0 P 2818505 Myxococcota 0.00 2 0 P1 3031711 Polyangia 0.00 2 0 O 3031712 Polyangiales 0.00 1 0 F 49 Polyangiaceae 0.00 1 0 G 39643 Sorangium 0.00 1 0 S 56 Sorangium cellulosum 0.00 1 1 S1 448385 Sorangium cellulosum So ce56 0.00 1 0 F 1524216 Labilitrichaceae 0.00 1 0 G 1524217 Labilithrix 0.00 1 1 S 1391654 Labilithrix luteola 0.00 1 0 P 203691 Spirochaetota 0.00 1 0 C 203692 Spirochaetia 0.00 1 0 O 136 Spirochaetales 0.00 1 0 F 2791015 Sphaerochaetaceae 0.00 1 1 G 399320 Sphaerochaeta 0.00 1 0 P 32066 Fusobacteriota 0.00 1 0 C 203490 Fusobacteriia 0.00 1 0 O 203491 Fusobacteriales 0.00 1 0 F 3072461 Haliovirgaceae 0.00 1 0 G 3072462 Haliovirga 0.00 1 1 S 2996794 Haliovirga abyssi