12.01 160216 160216 U 0 unclassified 87.99 1174280 716 R 1 root 87.94 1173529 3 R1 131567 cellular organisms 87.94 1173523 1275 D 2 Bacteria 87.44 1166902 655 P 1224 Pseudomonadota 86.98 1160762 445 C 1236 Gammaproteobacteria 86.58 1155374 11760 O 91347 Enterobacterales 80.36 1072451 61 F 1903409 Erwiniaceae 78.93 1053252 141 G 53335 Pantoea 78.83 1052046 0 G1 1654067 Pantoea agglomerans group 78.83 1052046 1052019 S 549 Pantoea agglomerans 0.00 18 18 S1 48984 Pantoea agglomerans pv. gypsophilae 0.00 9 9 S1 77834 Pantoea agglomerans pv. betae 0.06 773 4 G1 2630326 unclassified Pantoea 0.05 711 711 S 2654189 Pantoea sp. JZ2 0.00 30 30 S 3141322 Pantoea sp. BJ2 0.00 13 13 S 2787629 Pantoea sp. SM3640 0.00 13 13 S 2675223 Pantoea sp. RSPAM1 0.00 1 1 S 2490851 Pantoea sp. CCBC3-3-1 0.00 1 1 S 3028622 Pantoea sp. Lij88 0.01 105 105 S 59814 Pantoea dispersa 0.01 80 3 S 66269 Pantoea stewartii 0.00 57 57 S1 66270 Pantoea stewartii subsp. indologenes 0.00 20 0 S1 66271 Pantoea stewartii subsp. stewartii 0.00 20 20 S2 660596 Pantoea stewartii subsp. stewartii DC283 0.00 62 62 S 2052056 Pantoea phytobeneficialis 0.00 14 14 S 470932 Pantoea deleyi 0.00 13 13 S 553 Pantoea ananatis 0.00 9 4 S 470934 Pantoea vagans 0.00 5 5 S1 712898 Pantoea vagans C9-1 0.00 3 3 S 1891675 Pantoea alhagi 0.00 2 2 S 1076550 Pantoea rwandensis 0.00 2 2 S 3098669 Pantoea soli 0.00 1 1 S 472693 Pantoea eucrina 0.00 1 1 S 55209 Pantoea cypripedii 1.41 18879 410 G 551 Erwinia 0.68 9042 9042 S 68334 Erwinia aphidicola 0.28 3761 2309 S 552 Erwinia amylovora 0.11 1452 1452 S1 716540 Erwinia amylovora ATCC 49946 0.19 2506 2506 S 65700 Erwinia tracheiphila 0.13 1754 1754 S 55211 Erwinia persicina 0.06 738 80 S 182337 Erwinia billingiae 0.05 658 658 S1 634500 Erwinia billingiae Eb661 0.03 412 5 G1 2622719 unclassified Erwinia 0.03 350 350 S 3141543 Erwinia sp. HDF1-3R 0.00 55 55 S 2675378 Erwinia sp. E602 0.00 2 2 S 2547962 Erwinia sp. QL-Z3 0.01 161 161 S 55212 Erwinia rhapontici 0.00 36 36 S 2681984 Erwinia sorbitola 0.00 18 18 S 1324864 [Pantoea] beijingensis 0.00 18 18 S 3062598 Erwinia pyri 0.00 12 0 S 338565 Erwinia tasmaniensis 0.00 12 12 S1 465817 Erwinia tasmaniensis Et1/99 0.00 9 9 S 1922217 Candidatus Erwinia haradaeae 0.00 2 2 S 79967 Erwinia pyrifoliae 0.01 141 0 G 82986 Tatumella 0.01 140 140 S 53336 Tatumella citrea 0.00 1 1 S 82987 Tatumella ptyseos 0.01 104 0 G 3026546 Duffyella 0.01 104 104 S 1619313 Duffyella gerundensis 0.00 12 0 G 2100764 Mixta 0.00 6 6 S 665914 Mixta gaviniae 0.00 3 3 S 1615494 Mixta intestinalis 0.00 2 2 S 2872648 Mixta hanseatica 0.00 1 1 S 665913 Mixta calida 0.00 1 0 G 2997349 Winslowiella 0.00 1 1 S 92490 Winslowiella toletana 0.00 1 0 G 3231896 Paramixta 0.00 1 1 S 2740817 Paramixta manurensis 2.99 39881 13974 F 543 Enterobacteriaceae 0.87 11638 209 F1 2890311 Klebsiella/Raoultella group 0.84 11227 298 G 570 Klebsiella 0.55 7357 3760 S 573 Klebsiella pneumoniae 0.27 3595 64 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.26 3531 3531 S2 1392499 Klebsiella pneumoniae subsp. pneumoniae 1158 0.00 2 2 S1 574 Klebsiella pneumoniae subsp. ozaenae 0.17 2251 2251 S 244366 Klebsiella variicola 0.04 590 590 S 1134687 Klebsiella michiganensis 0.02 284 284 S 571 Klebsiella oxytoca 0.02 254 51 G1 2608929 unclassified Klebsiella 0.01 192 192 S 2851540 Klebsiella sp. PL-2018 0.00 6 6 S 2267618 Klebsiella sp. P1CD1 0.00 3 3 S 3111629 Klebsiella sp. ZJOU C1 0.00 1 1 S 2873296 Klebsiella sp. CTHL.F3a 0.00 1 1 S 2675726 Klebsiella sp. WP8-S18-ESBL-06 0.01 132 132 S 2058152 Klebsiella grimontii 0.00 33 33 S 548 Klebsiella aerogenes 0.00 22 19 S 1463165 Klebsiella quasipneumoniae 0.00 3 3 S1 1463164 Klebsiella quasipneumoniae subsp. similipneumoniae 0.00 6 6 S 2153354 Klebsiella huaxiensis 0.02 202 8 G 160674 Raoultella 0.01 113 113 S 575 Raoultella planticola 0.00 63 63 S 54291 Raoultella ornithinolytica 0.00 18 0 G1 2627600 unclassified Raoultella 0.00 18 18 S 2923366 Raoultella sp. HC6 0.33 4403 1 G 590 Salmonella 0.33 4401 968 S 28901 Salmonella enterica 0.23 3134 70 S1 59201 Salmonella enterica subsp. enterica 0.13 1792 1792 S2 596 Salmonella enterica subsp. enterica serovar Muenchen 0.08 1107 2 S2 58712 Salmonella enterica subsp. enterica serovar Anatum 0.08 1105 1105 S3 1454589 Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1728 0.00 35 0 S2 1242085 Salmonella enterica subsp. enterica serovar Macclesfield 0.00 35 35 S3 1242107 Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 0.00 28 28 S2 53961 Salmonella enterica subsp. enterica serovar Abortusovis 0.00 26 0 S2 436295 Salmonella enterica subsp. enterica serovar Poona 0.00 26 26 S3 1124962 Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 0.00 22 22 S2 1962641 Salmonella enterica subsp. enterica serovar Birkenhead 0.00 20 20 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.00 5 0 S2 595 Salmonella enterica subsp. enterica serovar Infantis 0.00 5 5 S3 596155 Salmonella enterica subsp. enterica serovar Infantis str. SARB27 0.00 4 4 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 4 4 S2 70803 Salmonella enterica subsp. enterica serovar Minnesota 0.00 4 4 S2 913070 Salmonella enterica subsp. enterica serovar Gaminara 0.00 3 0 S2 1242082 Salmonella enterica subsp. enterica serovar India 0.00 3 3 S3 1242098 Salmonella enterica subsp. enterica serovar India str. SA20085604 0.00 3 3 S2 2024273 Salmonella enterica subsp. enterica serovar Sundsvall 0.00 3 3 S2 58101 Salmonella enterica subsp. enterica serovar Waycross 0.00 2 2 S2 57743 Salmonella enterica subsp. enterica serovar Weltevreden 0.00 1 1 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.00 1 1 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 1 1 S2 192953 Salmonella enterica subsp. enterica serovar Stanley 0.00 1 1 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.00 1 0 S2 486994 Salmonella enterica subsp. enterica serovar Hvittingfoss 0.00 1 1 S3 1242097 Salmonella enterica subsp. enterica serovar Hvittingfoss str. SA20014981 0.00 1 0 S2 1243577 Salmonella enterica subsp. enterica serovar Milwaukee 0.00 1 1 S3 1243578 Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 0.02 289 0 S1 59202 Salmonella enterica subsp. salamae 0.02 286 286 S2 2500152 Salmonella enterica subsp. salamae serovar 42:r:- 0.00 2 2 S2 2577858 Salmonella enterica subsp. salamae serovar 56:b:[1,5] 0.00 1 0 S2 1243601 Salmonella enterica subsp. salamae serovar 55:k:z39 0.00 1 1 S3 1243602 Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K 0.00 7 0 S1 59205 Salmonella enterica subsp. houtenae 0.00 7 7 S2 2729104 Salmonella enterica subsp. houtenae serovar 43:z4 0.00 3 0 S1 59204 Salmonella enterica subsp. diarizonae 0.00 3 3 S2 1192842 Salmonella enterica subsp. diarizonae serovar 48:i:z 0.00 1 1 S 54736 Salmonella bongori 0.29 3914 7 G 561 Escherichia 0.27 3617 3568 S 562 Escherichia coli 0.00 35 35 S1 1329907 Escherichia coli APEC IMT5155 0.00 13 13 S1 1446707 Escherichia coli O25:NM 0.00 1 0 S1 1038927 Escherichia coli O104:H4 0.00 1 1 S2 1133852 Escherichia coli O104:H4 str. 2011C-3493 0.02 265 265 S 208962 Escherichia albertii 0.00 21 21 S 1499973 Escherichia marmotae 0.00 2 2 S 564 Escherichia fergusonii 0.00 2 0 G1 2608889 unclassified Escherichia 0.00 2 2 S 2044467 Escherichia sp. E4742 0.20 2647 260 G 544 Citrobacter 0.11 1455 1455 S 545 Citrobacter koseri 0.04 559 116 G1 1344959 Citrobacter freundii complex 0.02 248 248 S 546 Citrobacter freundii 0.01 173 173 S 57706 Citrobacter braakii 0.00 17 17 S 67827 Citrobacter werkmanii 0.00 3 3 S 1639133 Citrobacter portucalensis 0.00 2 0 G2 2816438 unclassified Citrobacter freundii complex 0.00 2 2 S 2066049 Citrobacter freundii complex sp. CFNIH2 0.02 310 42 S 35703 Citrobacter amalonaticus 0.02 268 268 S1 1261127 Citrobacter amalonaticus Y19 0.00 48 4 G1 2644389 unclassified Citrobacter 0.00 16 16 S 2716879 Citrobacter sp. Y3 0.00 10 10 S 2742648 Citrobacter sp. RHBSTW-00446 0.00 9 9 S 2742632 Citrobacter sp. RHBSTW-00053 0.00 3 3 S 2742667 Citrobacter sp. RHBSTW-00881 0.00 2 2 S 3015952 Citrobacter sp. 21OH12SH02A-Citro 0.00 2 2 S 2742655 Citrobacter sp. RHBSTW-00570 0.00 1 1 S 1703250 Citrobacter sp. CRE-46 0.00 1 1 S 2742624 Citrobacter sp. RHB25-C09 0.00 11 11 S 67824 Citrobacter farmeri 0.00 3 3 S 1563222 Citrobacter pasteurii 0.00 1 1 S 67825 Citrobacter rodentium 0.17 2229 203 G 547 Enterobacter 0.07 937 385 G1 2608935 unclassified Enterobacter 0.03 361 361 S 2831891 Enterobacter sp. JBIWA005 0.01 110 110 S 2742639 Enterobacter sp. RHBSTW-00175 0.00 45 45 S 2870346 Enterobacter sp. C2 0.00 16 16 S 2976431 Enterobacter sp. CP102 0.00 8 8 S 2742676 Enterobacter sp. RHBSTW-00994 0.00 5 5 S 1827481 Enterobacter sp. ODB01 0.00 2 2 S 399742 Enterobacter sp. 638 0.00 2 2 S 2831890 Enterobacter sp. JBIWA003 0.00 2 2 S 2831892 Enterobacter sp. JBIWA008 0.00 1 1 S 3077940 Enterobacter sp. DTU_2021_1002640_1_SI_PRY_ASU_LCPMC_013 0.06 812 9 G1 354276 Enterobacter cloacae complex 0.04 544 544 S 61645 Enterobacter asburiae 0.01 136 135 S 158836 Enterobacter hormaechei 0.00 1 1 S1 1812934 Enterobacter hormaechei subsp. hoffmannii 0.00 49 49 S 550 Enterobacter cloacae 0.00 31 31 S 299767 Enterobacter ludwigii 0.00 26 26 S 69218 Enterobacter cancerogenus 0.00 10 10 S 1812935 Enterobacter roggenkampii 0.00 2 2 S 208224 Enterobacter kobei 0.00 2 2 S 2071710 Enterobacter sichuanensis 0.00 2 0 G2 2757714 unclassified Enterobacter cloacae complex 0.00 2 2 S 1915310 Enterobacter cloacae complex sp. ECNIH7 0.00 1 1 S 2494701 Enterobacter chengduensis 0.02 227 227 S 881260 Enterobacter bugandensis 0.00 26 26 S 2494702 Enterobacter huaxiensis 0.00 15 15 S 885040 Enterobacter soli 0.00 8 8 S 539813 Enterobacter mori 0.00 1 1 S 2478464 Enterobacter oligotrophicus 0.02 300 1 G 413496 Cronobacter 0.02 298 7 S 28141 Cronobacter sakazakii 0.02 291 291 S1 290339 Cronobacter sakazakii ATCC BAA-894 0.00 1 1 S 413503 Cronobacter malonaticus 0.02 233 0 G 1330547 Kosakonia 0.02 203 0 G1 2632876 unclassified Kosakonia 0.01 147 147 S 3139408 Kosakonia sp. BYX6 0.00 40 40 S 2067958 Kosakonia sp. MUSA4 0.00 15 15 S 2492396 Kosakonia sp. CCTCC M2018092 0.00 1 1 S 2980557 Kosakonia sp. ML.JS2a 0.00 25 25 S 208223 Kosakonia cowanii 0.00 2 2 S 497725 Kosakonia oryzae 0.00 1 1 S 551989 Kosakonia arachidis 0.00 1 1 S 1005665 Kosakonia oryzendophytica 0.00 1 1 S 1158459 Kosakonia sacchari 0.02 229 0 F1 191675 Enterobacteriaceae incertae sedis 0.02 229 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.01 77 0 F3 84564 ant endosymbionts 0.01 77 0 G 203804 Candidatus Blochmanniella 0.01 76 76 S 108080 Candidatus Blochmanniella camponoti 0.00 1 0 G1 711328 unclassified Candidatus Blochmanniella 0.00 1 1 S 2681987 Blochmannia endosymbiont of Colobopsis nipponica 0.01 76 0 G 801 Symbiopectobacterium 0.01 76 76 S 2871826 Symbiopectobacterium purcellii 0.01 75 0 F3 146507 aphid secondary symbionts 0.01 74 0 G 568987 Candidatus Hamiltonella 0.01 74 4 S 138072 Candidatus Hamiltonella defensa 0.01 70 70 S1 672795 Candidatus Hamiltonella defensa (Bemisia tabaci) 0.00 1 1 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.00 1 0 G 1906659 Candidatus Hoaglandella 0.00 1 1 S 1778263 Candidatus Hoaglandella endobia 0.01 118 0 G 158876 Yokenella 0.01 118 118 S 158877 Yokenella regensburgei 0.00 56 0 G 1330546 Pluralibacter 0.00 56 56 S 61647 Pluralibacter gergoviae 0.00 35 0 G 579 Kluyvera 0.00 28 28 S 61648 Kluyvera intermedia 0.00 5 5 S 51288 Kluyvera ascorbata 0.00 1 1 S 580 Kluyvera cryocrescens 0.00 1 0 G1 2619995 unclassified Kluyvera 0.00 1 1 S 2873269 Kluyvera sp. CRP 0.00 31 0 G 83654 Leclercia 0.00 22 0 G1 2627398 unclassified Leclercia 0.00 18 18 S 2282309 Leclercia sp. W17 0.00 2 2 S 2282310 Leclercia sp. W6 0.00 1 1 S 2714951 Leclercia sp. 29361 0.00 1 1 S 3138178 Leclercia sp. S52 0.00 7 7 S 83655 Leclercia adecarboxylata 0.00 2 2 S 2815358 Leclercia pneumoniae 0.00 20 0 G 82976 Buttiauxella 0.00 18 18 S 82977 Buttiauxella agrestis 0.00 2 0 G1 2634062 unclassified Buttiauxella 0.00 2 2 S 2479367 Buttiauxella sp. 3AFRM03 0.00 14 0 G 2726810 Scandinavium 0.00 14 14 S 1851514 Scandinavium goeteborgense 0.00 10 0 G 158483 Cedecea 0.00 10 10 S 158822 Cedecea neteri 0.00 9 0 G 702 Plesiomonas 0.00 9 9 S 703 Plesiomonas shigelloides 0.00 6 1 G 620 Shigella 0.00 2 2 S 621 Shigella boydii 0.00 2 2 S 624 Shigella sonnei 0.00 1 1 S 623 Shigella flexneri 0.00 3 0 G 1649298 Siccibacter 0.00 3 3 S 1505757 Siccibacter colletis 0.00 2 0 G 2055880 Pseudescherichia 0.00 2 2 S 566 Pseudescherichia vulneris 0.00 2 2 G 1177214 Candidatus Profftia 0.00 2 0 G 1330545 Lelliottia 0.00 2 0 G1 2642424 unclassified Lelliottia 0.00 1 1 S 2153385 Lelliottia sp. WB101 0.00 1 1 S 3110110 Lelliottia sp. JS-SCA-14 0.00 2 0 G 1504576 Pseudocitrobacter 0.00 2 2 S 2891570 Pseudocitrobacter corydidari 0.00 1 0 G 447792 Phytobacter 0.00 1 0 G1 2625049 unclassified Phytobacter 0.00 1 1 S 2487150 Phytobacter sp. MRY16-398 0.00 1 0 G 2815296 Jejubacter 0.00 1 1 S 2579935 Jejubacter calystegiae 0.00 1 0 G 1903434 Atlantibacter 0.00 1 1 S 565 Atlantibacter hermannii 0.00 1 1 G 401618 Candidatus Riesia 1.12 14976 326 F 1903414 Morganellaceae 0.88 11767 2139 G 586 Providencia 0.67 8962 0 G1 2633465 unclassified Providencia 0.67 8961 8961 S 2791982 Providencia sp. 2.29 0.00 1 1 S 2939731 Providencia sp. PROV188 0.02 333 333 S 587 Providencia rettgeri 0.02 333 333 S 588 Providencia stuartii 0.16 2177 3 G 583 Proteus 0.15 2047 2047 S 584 Proteus mirabilis 0.00 60 60 S 2050967 Proteus faecis 0.00 48 0 S 1574161 Proteus terrae 0.00 48 48 S1 626774 Proteus terrae subsp. cibarius 0.00 19 0 G1 257482 unclassified Proteus (in: enterobacteria) 0.00 19 19 S 2697019 Proteus sp. ZN5 0.03 358 3 G 637 Arsenophonus 0.03 341 341 S 638 Arsenophonus nasoniae 0.00 13 0 G1 2627083 unclassified Arsenophonus 0.00 7 7 S 634121 Arsenophonus symbiont of Ornithomya chloropus 0.00 5 5 S 3041619 Arsenophonus sp. aPb 0.00 1 1 S 1231049 Arsenophonus endosymbiont of Aphis craccivora 0.00 1 1 S 2879119 Arsenophonus apicola 0.02 322 0 G 581 Morganella 0.02 322 13 S 582 Morganella morganii 0.02 309 309 S1 180434 Morganella morganii subsp. morganii 0.00 20 13 G 626 Xenorhabdus 0.00 4 4 S 351672 Xenorhabdus griffiniae 0.00 1 0 S 40576 Xenorhabdus bovienii 0.00 1 1 S1 406818 Xenorhabdus bovienii SS-2004 0.00 1 0 S 40577 Xenorhabdus poinarii 0.00 1 1 S1 1354304 Xenorhabdus poinarii G6 0.00 1 1 S 351679 Xenorhabdus hominickii 0.00 6 0 G 29487 Photorhabdus 0.00 4 4 S 230089 Photorhabdus thracensis 0.00 1 1 S 171438 Photorhabdus akhurstii 0.00 1 1 S 291112 Photorhabdus asymbiotica 1.07 14334 68 F 1903411 Yersiniaceae 0.76 10198 231 G 613 Serratia 0.24 3193 3193 S 615 Serratia marcescens 0.19 2499 2485 S 138074 Serratia symbiotica 0.00 14 14 S1 3066236 Serratia symbiotica (Periphyllus acericola) 0.07 981 9 G1 2647522 unclassified Serratia (in: enterobacteria) 0.06 818 818 S 488142 Serratia sp. SCBI 0.01 105 105 S 2831894 Serratia sp. JSRIV002 0.00 34 34 S 2831893 Serratia sp. JSRIV001 0.00 3 3 S 1327989 Serratia sp. FS14 0.00 3 3 S 2831895 Serratia sp. JSRIV004 0.00 3 3 S 2724469 Serratia sp. JUb9 0.00 3 3 S 2482769 Serratia sp. P2ACOL2 0.00 1 1 S 2986763 Serratia sp. UGAL515B_01 0.00 1 1 S 2831896 Serratia sp. JSRIV006 0.00 1 1 S 2773264 Serratia sp. Tan611 0.06 866 866 S 614 Serratia liquefaciens 0.06 840 840 S 2703794 Serratia nevei 0.05 684 684 S 82996 Serratia plymuthica 0.03 384 0 S 2338073 Serratia inhibens 0.03 384 384 S1 1154756 Serratia inhibens PRI-2C 0.02 272 272 S 47917 Serratia fonticola 0.02 220 220 S 61651 Serratia ficaria 0.00 10 10 S 300181 Serratia ureilytica 0.00 8 8 S 618 Serratia odorifera 0.00 7 7 S 28151 Serratia proteamaculans 0.00 2 2 S 61652 Serratia rubidaea 0.00 1 1 S 137545 Serratia quinivorans 0.23 3085 342 G 629 Yersinia 0.09 1138 0 G1 1649845 Yersinia pseudotuberculosis complex 0.06 771 720 S 632 Yersinia pestis 0.00 36 0 S1 1234659 Yersinia pestis subsp. microtus 0.00 36 36 S2 229193 Yersinia pestis biovar Microtus str. 91001 0.00 15 15 S1 637386 Yersinia pestis Z176003 0.02 311 311 S 367190 Yersinia similis 0.00 56 12 S 633 Yersinia pseudotuberculosis 0.00 44 44 S1 273123 Yersinia pseudotuberculosis IP 32953 0.08 1126 1126 S 29486 Yersinia ruckeri 0.03 356 356 S 630 Yersinia enterocolitica 0.00 42 42 S 2339259 Yersinia hibernica 0.00 26 0 S 33060 Yersinia mollaretii 0.00 26 26 S1 349967 Yersinia mollaretii ATCC 43969 0.00 22 22 S 419257 Yersinia massiliensis 0.00 18 18 S 1604335 Yersinia rochesterensis 0.00 9 9 S 29484 Yersinia frederiksenii 0.00 5 5 S 631 Yersinia intermedia 0.00 1 1 S 935293 Yersinia entomophaga 0.06 780 1 G 1927833 Candidatus Fukatsuia 0.06 779 779 S 1878942 Candidatus Fukatsuia symbiotica 0.01 183 0 G 34037 Rahnella 0.01 170 170 S 1510570 Rahnella victoriana 0.00 10 10 S 1805933 Rahnella sikkimica 0.00 2 2 S 2703885 Rahnella aceris 0.00 1 1 S 2816248 Rahnella bonaserana 0.00 7 0 G 1565532 Rouxiella 0.00 5 5 S 1646377 Rouxiella badensis 0.00 2 2 S 1513468 Rouxiella chamberiensis 0.00 7 0 G 1745211 Chania 0.00 7 0 S 1639108 Chania multitudinisentens 0.00 7 7 S1 1441930 Chania multitudinisentens RB-25 0.00 3 0 G 929812 Gibbsiella 0.00 3 3 S 929813 Gibbsiella quercinecans 0.00 2 0 G 41201 Ewingella 0.00 2 2 S 41202 Ewingella americana 0.00 1 0 G 1964366 Nissabacter 0.00 1 0 G1 2636213 unclassified Nissabacter 0.00 1 1 S 2126321 Nissabacter sp. SGAir0207 0.10 1352 1 F 1903410 Pectobacteriaceae 0.10 1320 7 G 122277 Pectobacterium 0.07 981 224 S 29471 Pectobacterium atrosepticum 0.06 757 757 S1 218491 Pectobacterium atrosepticum SCRI1043 0.02 309 309 S 180957 Pectobacterium brasiliense 0.00 7 7 S 2204145 Pectobacterium aquaticum 0.00 6 6 S 2042057 Pectobacterium polaris 0.00 3 3 S 1201031 Pectobacterium aroidearum 0.00 3 3 S 2488639 Pectobacterium versatile 0.00 1 1 S 1905730 Pectobacterium parmentieri 0.00 1 0 S 554 Pectobacterium carotovorum 0.00 1 1 S1 555 Pectobacterium carotovorum subsp. carotovorum 0.00 1 0 S 55208 Pectobacterium wasabiae 0.00 1 1 S1 1175631 Pectobacterium wasabiae CFBP 3304 0.00 1 1 S 2778550 Pectobacterium parvum 0.00 14 0 G 71655 Brenneria 0.00 13 13 S 3057057 Brenneria uluponensis 0.00 1 1 S 2722756 Brenneria izadpanahii 0.00 9 0 G 1082702 Lonsdalea 0.00 9 9 S 1172565 Lonsdalea populi 0.00 8 2 G 204037 Dickeya 0.00 3 3 S 204039 Dickeya dianthicola 0.00 2 1 S 556 Dickeya chrysanthemi 0.00 1 1 S1 1223569 Dickeya chrysanthemi NCPPB 402 0.00 1 1 S 1089444 Dickeya solani 0.03 384 1 F 1903412 Hafniaceae 0.03 368 13 G 635 Edwardsiella 0.02 277 277 S 636 Edwardsiella tarda 0.00 47 47 S 67780 Edwardsiella ictaluri 0.00 29 29 S 1263550 Edwardsiella piscicida 0.00 2 2 S 93378 Edwardsiella hoshinae 0.00 15 0 G 568 Hafnia 0.00 9 9 S 569 Hafnia alvei 0.00 6 6 S 546367 Hafnia paralvei 0.02 235 0 F 2812006 Bruguierivoracaceae 0.02 235 1 G 84565 Sodalis 0.01 131 0 S 63612 Sodalis glossinidius 0.01 131 131 S1 343509 Sodalis glossinidius str. 'morsitans' 0.00 57 57 S 1239307 Sodalis praecaptivus 0.00 46 0 S 1486991 Candidatus Sodalis pierantonius 0.00 46 46 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.00 1 0 F 1903416 Budviciaceae 0.00 1 0 G 2172100 Limnobaculum 0.00 1 1 S 2498113 Limnobaculum zhutongyuii 0.09 1260 0 O 72274 Pseudomonadales 0.09 1259 0 F 135621 Pseudomonadaceae 0.09 1259 2 G 286 Pseudomonas 0.07 999 0 G1 196821 unclassified Pseudomonas 0.07 996 996 S 3020843 Pseudomonas sp. Q1-7 0.00 1 1 S 3141539 Pseudomonas sp. F3-2 0.00 1 1 S 1981174 Pseudomonas sp. M30-35 0.00 1 1 S 2049589 Pseudomonas sp. HLS-6 0.01 171 169 G1 136849 Pseudomonas syringae group 0.00 2 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.00 2 2 S 317 Pseudomonas syringae 0.01 78 78 S 2518644 Pseudomonas tructae 0.00 3 3 S 289370 Pseudomonas argentinensis 0.00 2 2 S 485870 Pseudomonas anuradhapurensis 0.00 1 1 S 2364649 Pseudomonas laurentiana 0.00 1 0 G1 136841 Pseudomonas aeruginosa group 0.00 1 1 S 287 Pseudomonas aeruginosa 0.00 1 1 G1 136845 Pseudomonas putida group 0.00 1 0 G1 136843 Pseudomonas fluorescens group 0.00 1 0 S 294 Pseudomonas fluorescens 0.00 1 1 S1 743713 Pseudomonas fluorescens R124 0.00 1 0 F 2887365 Marinobacteraceae 0.00 1 0 G 2742 Marinobacter 0.00 1 0 G1 83889 unclassified Marinobacter 0.00 1 1 S 1749259 Marinobacter sp. LQ44 0.06 763 1 O 135614 Lysobacterales 0.06 760 0 F 32033 Lysobacteraceae 0.06 757 754 G 40323 Stenotrophomonas 0.00 3 0 G1 995085 Stenotrophomonas maltophilia group 0.00 3 3 S 40324 Stenotrophomonas maltophilia 0.00 2 0 G 338 Xanthomonas 0.00 2 0 S 343 Xanthomonas translucens 0.00 2 2 S1 134875 Xanthomonas translucens pv. translucens 0.00 1 0 G 2370 Xylella 0.00 1 1 S 2371 Xylella fastidiosa 0.00 2 0 F 1775411 Rhodanobacteraceae 0.00 2 0 G 231454 Dyella 0.00 2 0 G1 2634549 unclassified Dyella 0.00 2 2 S 3069105 Dyella sp. A6 0.05 660 0 O 135624 Aeromonadales 0.05 660 0 F 84642 Aeromonadaceae 0.05 660 89 G 642 Aeromonas 0.02 296 296 S 648 Aeromonas caviae 0.02 270 270 S 654 Aeromonas veronii 0.00 4 0 G1 257493 unclassified Aeromonas 0.00 4 4 S 2033032 Aeromonas sp. CA23 0.00 1 1 S 644 Aeromonas hydrophila 0.04 550 0 O 135619 Oceanospirillales 0.03 366 0 F 28256 Halomonadaceae 0.03 366 0 G 2745 Halomonas 0.03 365 5 G1 2609666 unclassified Halomonas 0.03 360 360 S 3061632 Halomonas sp. I5-271120 0.00 1 1 S 232346 Halomonas alkaliantarctica 0.01 182 0 F 255527 Saccharospirillaceae 0.01 182 0 G 230494 Reinekea 0.01 182 182 S 1336806 Reinekea forsetii 0.00 1 0 F 224379 Hahellaceae 0.00 1 0 G 158481 Hahella 0.00 1 0 S 158327 Hahella chejuensis 0.00 1 1 S1 349521 Hahella chejuensis KCTC 2396 0.00 1 0 F 449732 Litorivicinaceae 0.00 1 0 G 418700 Litorivicinus 0.00 1 1 S 418701 Litorivicinus lipolyticus 0.04 505 0 O 135623 Vibrionales 0.04 505 0 F 641 Vibrionaceae 0.04 503 151 G 662 Vibrio 0.02 286 286 S 28169 Vibrio pelagius 0.00 50 1 G1 717610 Vibrio harveyi group 0.00 42 42 S 680 Vibrio campbellii 0.00 7 7 S 669 Vibrio harveyi 0.00 9 9 S 1481914 Vibrio ishigakensis 0.00 2 2 S 2014742 Vibrio tarriae 0.00 1 1 S 685 Vibrio diazotrophicus 0.00 1 0 G1 2614977 unclassified Vibrio 0.00 1 1 S 2751178 Vibrio sp. B1FLJ16 0.00 1 1 S 28171 Vibrio aestuarianus 0.00 1 1 S 62763 Vibrio pectenicida 0.00 1 1 S 1074311 Vibrio alfacsensis 0.00 2 0 G 246861 Grimontia 0.00 2 2 S 673 Grimontia hollisae 0.04 491 0 O 135613 Chromatiales 0.03 373 0 F 72276 Ectothiorhodospiraceae 0.03 373 0 G 106633 Thioalkalivibrio 0.03 373 0 S 108010 Thioalkalivibrio paradoxus 0.03 373 373 S1 713585 Thioalkalivibrio paradoxus ARh 1 0.01 118 0 F 1046 Chromatiaceae 0.01 118 0 G 1227 Nitrosococcus 0.01 118 0 S 473531 Nitrosococcus watsonii 0.01 118 118 S1 105559 Nitrosococcus watsonii C-113 0.03 356 0 O 2887327 Kangiellales 0.03 356 0 F 1920240 Kangiellaceae 0.03 356 0 G 261963 Kangiella 0.03 356 0 S 261964 Kangiella koreensis 0.03 356 356 S1 523791 Kangiella koreensis DSM 16069 0.01 187 0 O 2887326 Moraxellales 0.01 187 19 F 468 Moraxellaceae 0.01 124 122 G 469 Acinetobacter 0.00 1 1 S 2715163 Acinetobacter lanii 0.00 1 1 S 202950 Acinetobacter baylyi 0.00 44 1 G 497 Psychrobacter 0.00 43 43 G1 196806 unclassified Psychrobacter 0.01 112 0 O 1706369 Cellvibrionales 0.01 109 0 F 1706372 Halieaceae 0.01 109 0 G 1217416 Halioglobus 0.01 109 109 S 930805 Halioglobus japonicus 0.00 2 0 F 1706373 Microbulbiferaceae 0.00 2 0 G 48073 Microbulbifer 0.00 2 0 G1 2619833 unclassified Microbulbifer 0.00 1 1 S 359370 Microbulbifer sp. A4B17 0.00 1 1 S 2745199 Microbulbifer sp. YPW1 0.00 1 0 F 1706371 Cellvibrionaceae 0.00 1 0 G 316625 Saccharophagus 0.00 1 1 S 86304 Saccharophagus degradans 0.00 56 0 O 135625 Pasteurellales 0.00 56 0 F 712 Pasteurellaceae 0.00 56 0 G 724 Haemophilus 0.00 56 56 S 727 Haemophilus influenzae 0.00 2 0 O 135622 Alteromonadales 0.00 1 0 F 267888 Pseudoalteromonadaceae 0.00 1 1 G 53246 Pseudoalteromonas 0.00 1 0 F 267893 Idiomarinaceae 0.00 1 0 G 135575 Idiomarina 0.00 1 0 G1 2614829 unclassified Idiomarina 0.00 1 1 S 2100422 Idiomarina sp. OT37-5b 0.00 1 0 O 3085109 Thiohalobacterales 0.00 1 0 F 3085110 Thiohalobacteraceae 0.00 1 1 G 1273155 Thiohalobacter 0.40 5292 0 C 28216 Betaproteobacteria 0.40 5281 4 O 80840 Burkholderiales 0.34 4587 0 F 80864 Comamonadaceae 0.33 4447 0 G 34072 Variovorax 0.33 4447 4447 S 34073 Variovorax paradoxus 0.01 139 0 G 364316 Verminephrobacter 0.01 139 0 S 364317 Verminephrobacter eiseniae 0.01 139 139 S1 391735 Verminephrobacter eiseniae EF01-2 0.00 1 0 G 283 Comamonas 0.00 1 0 S 32013 Comamonas terrigena 0.00 1 1 S1 1219032 Comamonas terrigena NBRC 13299 0.03 433 0 F 119060 Burkholderiaceae 0.03 336 4 G 1822464 Paraburkholderia 0.01 177 177 S 273251 Paraburkholderia sabiae 0.01 83 83 S 1245436 Paraburkholderia kirstenboschensis 0.01 72 72 S 75105 Paraburkholderia caribensis 0.01 76 0 G 106589 Cupriavidus 0.01 76 76 S 164546 Cupriavidus taiwanensis 0.00 11 0 G 32008 Burkholderia 0.00 6 0 G1 2613784 unclassified Burkholderia 0.00 5 5 S 1494466 Burkholderia sp. FERM BP-3421 0.00 1 1 S 2811788 Burkholderia sp. MS455 0.00 3 3 S 337 Burkholderia glumae 0.00 1 0 G1 87882 Burkholderia cepacia complex 0.00 1 1 S 292 Burkholderia cepacia 0.00 1 0 G1 111527 pseudomallei group 0.00 1 1 S 1503053 Burkholderia singularis 0.00 8 0 G 93217 Pandoraea 0.00 8 8 S 656179 Pandoraea faecigallinarum 0.00 1 0 G 44013 Polynucleobacter 0.00 1 0 G1 2640945 unclassified Polynucleobacter 0.00 1 1 S 1758374 Polynucleobacter sp. TSB-Sco08W16 0.00 1 1 G 48736 Ralstonia 0.02 256 0 F 75682 Oxalobacteraceae 0.02 256 0 F1 2895353 Telluria group 0.02 256 0 G 149698 Massilia 0.02 256 256 S 1141883 Massilia putida 0.00 1 0 F 2975441 Sphaerotilaceae 0.00 1 0 G 93681 Roseateles 0.00 1 0 G1 2626991 unclassified Roseateles 0.00 1 1 S 2877940 Roseateles sp. XES5 0.00 6 0 O 32003 Nitrosomonadales 0.00 5 0 F 2008790 Thiobacillaceae 0.00 5 0 G 919 Thiobacillus 0.00 5 0 G1 2646513 unclassified Thiobacillus 0.00 5 5 S 924 Thiobacillus sp. 0.00 1 0 F 32011 Methylophilaceae 0.00 1 0 G 1679002 Candidatus Methylopumilus 0.00 1 1 S 1581557 Candidatus Methylopumilus planktonicus 0.00 4 0 O 206351 Neisseriales 0.00 3 0 F 1499392 Chromobacteriaceae 0.00 3 0 G 535 Chromobacterium 0.00 3 0 G1 2641838 unclassified Chromobacterium 0.00 3 3 S 2735795 Chromobacterium sp. Beijing 0.00 1 0 F 2897176 Aquaspirillaceae 0.00 1 0 G 187 Aquaspirillum 0.00 1 0 G1 2620219 unclassified Aquaspirillum 0.00 1 1 S 1938604 Aquaspirillum sp. LM1 0.00 1 0 O 206389 Rhodocyclales 0.00 1 0 F 75787 Rhodocyclaceae 0.00 1 0 G 146937 Azospira 0.00 1 0 S 146939 Azospira oryzae 0.00 1 1 S1 640081 Azospira oryzae PS 0.01 193 2 C 28211 Alphaproteobacteria 0.01 140 0 O 356 Hyphomicrobiales 0.01 130 0 F 82115 Rhizobiaceae 0.01 114 0 F1 227292 Sinorhizobium/Ensifer group 0.01 114 0 G 28105 Sinorhizobium 0.01 111 0 G1 663276 Sinorhizobium fredii group 0.01 111 0 S 380 Sinorhizobium fredii 0.01 111 111 S1 394 Sinorhizobium fredii NGR234 0.00 3 3 S 375549 Sinorhizobium mexicanum 0.00 16 0 G 323620 Shinella 0.00 16 0 G1 2643062 unclassified Shinella 0.00 16 16 S 879274 Shinella sp. HZN7 0.00 3 0 F 2821832 Stappiaceae 0.00 3 0 G 258255 Pseudovibrio 0.00 3 0 G1 2627060 unclassified Pseudovibrio 0.00 3 3 S 911045 Pseudovibrio sp. FO-BEG1 0.00 3 0 F 41294 Nitrobacteraceae 0.00 3 1 G 374 Bradyrhizobium 0.00 2 0 G1 2631580 unclassified Bradyrhizobium 0.00 1 1 S 114615 Bradyrhizobium sp. ORS 278 0.00 1 1 S 1197460 Bradyrhizobium sp. 6(2017) 0.00 2 0 F 2831106 Devosiaceae 0.00 2 0 G 46913 Devosia 0.00 2 2 S 191302 Devosia neptuniae 0.00 1 0 F 2831090 Blastochloridaceae 0.00 1 0 G 59282 Blastochloris 0.00 1 1 S 1079 Blastochloris viridis 0.00 1 0 F 69277 Phyllobacteriaceae 0.00 1 0 G 68287 Mesorhizobium 0.00 1 0 G1 325217 unclassified Mesorhizobium 0.00 1 1 S 2744520 Mesorhizobium sp. 131-3-5 0.00 18 0 O 204455 Rhodobacterales 0.00 9 0 F 31989 Paracoccaceae 0.00 8 1 G 265 Paracoccus 0.00 6 6 S 34002 Paracoccus alcaliphilus 0.00 1 1 S 2259340 Paracoccus suum 0.00 1 0 G 1653176 Cereibacter 0.00 1 1 S 1063 Cereibacter sphaeroides 0.00 9 0 F 2854170 Roseobacteraceae 0.00 6 0 G 245186 Loktanella 0.00 6 6 S 195913 Loktanella salsilacus 0.00 2 0 G 93682 Roseivivax 0.00 2 2 G1 2639302 unclassified Roseivivax 0.00 1 0 G 60136 Sulfitobacter 0.00 1 0 G1 196795 unclassified Sulfitobacter 0.00 1 1 S 1389004 Sulfitobacter sp. SK011 0.00 14 1 O 766 Rickettsiales 0.00 13 0 F 942 Anaplasmataceae 0.00 13 0 F1 952 Wolbachieae 0.00 13 0 G 953 Wolbachia 0.00 13 0 G1 2640676 unclassified Wolbachia 0.00 12 12 S 3066146 Wolbachia endosymbiont (group A) of Lypha dubia 0.00 1 1 S 3066154 Wolbachia endosymbiont (group A) of Pipizella viduata 0.00 13 0 O 204457 Sphingomonadales 0.00 12 0 F 41297 Sphingomonadaceae 0.00 9 0 G 150203 Blastomonas 0.00 9 9 S 1550728 Blastomonas fulva 0.00 3 0 G 13687 Sphingomonas 0.00 2 2 S 2071607 Sphingomonas rhizophila 0.00 1 0 G1 196159 unclassified Sphingomonas 0.00 1 1 S 2903960 Sphingomonas sp. S2-65 0.00 1 0 F 335929 Erythrobacteraceae 0.00 1 0 G 1295327 Croceicoccus 0.00 1 0 G1 2629967 unclassified Croceicoccus 0.00 1 1 S 2798724 Croceicoccus sp. YJ47 0.00 3 0 O 204441 Rhodospirillales 0.00 2 0 F 3036766 Magnetospirillaceae 0.00 2 0 G 3031148 Paramagnetospirillum 0.00 2 0 S 84159 Paramagnetospirillum magneticum 0.00 2 2 S1 342108 Paramagnetospirillum magneticum AMB-1 0.00 1 0 F 41295 Rhodospirillaceae 0.00 1 0 G 13134 Magnetospirillum 0.00 1 0 G1 2617991 unclassified Magnetospirillum 0.00 1 1 S 1639348 Magnetospirillum sp. ME-1 0.00 2 0 O 204458 Caulobacterales 0.00 2 0 F 76892 Caulobacteraceae 0.00 2 0 G 75 Caulobacter 0.00 2 2 S 2708539 Caulobacter soli 0.00 1 0 O 1921002 Holosporales 0.00 1 0 F 2100208 Caedimonadaceae 0.00 1 0 G 1509243 Candidatus Nucleicultrix 0.00 1 0 S 1509244 Candidatus Nucleicultrix amoebiphila 0.00 1 1 S1 1414854 Candidatus Nucleicultrix amoebiphila FS5 0.23 3080 0 D1 1783270 FCB group 0.23 3080 0 D2 68336 Bacteroidota/Chlorobiota group 0.23 3080 10 P 976 Bacteroidota 0.23 3046 0 C 200643 Bacteroidia 0.23 3046 0 O 171549 Bacteroidales 0.23 3045 0 F 2005525 Tannerellaceae 0.23 3045 0 G 375288 Parabacteroides 0.23 3045 3045 S 823 Parabacteroides distasonis 0.00 1 0 F 815 Bacteroidaceae 0.00 1 0 G 816 Bacteroides 0.00 1 0 G1 139043 environmental samples 0.00 1 1 S 162156 uncultured Bacteroides sp. 0.00 18 0 C 117743 Flavobacteriia 0.00 18 0 O 200644 Flavobacteriales 0.00 9 0 F 49546 Flavobacteriaceae 0.00 6 1 G 237 Flavobacterium 0.00 2 2 S 1306519 Flavobacterium commune 0.00 1 1 S 2162713 Flavobacterium magnum 0.00 1 0 G1 196869 unclassified Flavobacterium 0.00 1 1 S 2746225 Flavobacterium sp. K5-23 0.00 1 1 S 3003259 Flavobacterium luteolum 0.00 2 0 G 52959 Polaribacter 0.00 1 1 S 2818493 Polaribacter cellanae 0.00 1 1 S 574710 Polaribacter gangjinensis 0.00 1 0 G 104267 Tenacibaculum 0.00 1 1 S 104268 Tenacibaculum mesophilum 0.00 5 0 F 39782 Blattabacteriaceae 0.00 5 0 G 34098 Blattabacterium 0.00 5 5 S 1653831 Blattabacterium cuenoti 0.00 3 0 F 2762318 Weeksellaceae 0.00 2 0 G 34084 Riemerella 0.00 2 2 S 34085 Riemerella anatipestifer 0.00 1 0 F1 2782232 Chryseobacterium group 0.00 1 0 G 59732 Chryseobacterium 0.00 1 1 S 59733 Chryseobacterium scophthalmum 0.00 1 0 F 3228945 Sanyastnellaceae 0.00 1 0 G 3228946 Sanyastnella 0.00 1 1 S 3069118 Sanyastnella coralliicola 0.00 4 0 C 117747 Sphingobacteriia 0.00 4 0 O 200666 Sphingobacteriales 0.00 4 0 F 84566 Sphingobacteriaceae 0.00 1 0 G 84567 Pedobacter 0.00 1 1 S 2605747 Pedobacter aquae 0.00 1 0 G 376469 Olivibacter 0.00 1 0 G1 2632301 unclassified Olivibacter 0.00 1 1 S 2764720 Olivibacter sp. SDN3 0.00 1 0 G 423349 Mucilaginibacter 0.00 1 1 S 1550579 Mucilaginibacter gotjawali 0.00 1 0 G 929509 Solitalea 0.00 1 0 S 995 Solitalea canadensis 0.00 1 1 S1 929556 Solitalea canadensis DSM 3403 0.00 2 0 C 768503 Cytophagia 0.00 2 0 O 768507 Cytophagales 0.00 2 0 F 1853232 Hymenobacteraceae 0.00 2 0 G 89966 Hymenobacter 0.00 1 1 S 2615203 Hymenobacter baengnokdamensis 0.00 1 0 G1 2615202 unclassified Hymenobacter 0.00 1 1 S 2596915 Hymenobacter sp. NBH84 0.15 1962 3 D1 1783272 Terrabacteria group 0.08 1055 0 P 201174 Actinomycetota 0.08 1055 91 C 1760 Actinomycetes 0.03 372 0 O 1643682 Geodermatophilales 0.03 372 0 F 85030 Geodermatophilaceae 0.03 372 0 G 38501 Blastococcus 0.03 372 0 S 138336 Blastococcus saxobsidens 0.03 372 372 S1 1146883 Blastococcus saxobsidens DD2 0.02 309 1 O 85007 Mycobacteriales 0.02 268 0 F 1762 Mycobacteriaceae 0.02 263 0 G 1866885 Mycolicibacterium 0.02 263 263 S 1286181 Mycolicibacterium arabiense 0.00 5 0 G 1763 Mycobacterium 0.00 5 0 G1 77643 Mycobacterium tuberculosis complex 0.00 5 5 S 78331 Mycobacterium canetti 0.00 36 0 F 85025 Nocardiaceae 0.00 34 0 G 1817 Nocardia 0.00 31 31 S 1141657 Nocardia vulneris 0.00 2 2 S 2755382 Nocardia huaxiensis 0.00 1 1 S 208602 Nocardia puris 0.00 2 0 G 1827 Rhodococcus 0.00 2 0 G1 192944 unclassified Rhodococcus (in: high G+C Gram-positive bacteria) 0.00 1 1 S 1302308 Rhodococcus sp. P1Y 0.00 1 1 S 1723645 Rhodococcus sp. 008 0.00 2 0 F 1653 Corynebacteriaceae 0.00 2 0 G 1716 Corynebacterium 0.00 1 0 S 1404244 Corynebacterium glyciniphilum 0.00 1 1 S1 1404245 Corynebacterium glyciniphilum AJ 3170 0.00 1 1 S 156976 Corynebacterium riegelii 0.00 2 0 F 85026 Gordoniaceae 0.00 2 2 G 2053 Gordonia 0.02 258 0 O 85011 Kitasatosporales 0.02 258 0 F 2062 Streptomycetaceae 0.02 258 0 G 1883 Streptomyces 0.02 255 28 G1 2593676 unclassified Streptomyces 0.02 224 224 S 465541 Streptomyces sp. Mg1 0.00 1 1 S 2903670 Streptomyces sp. NBC_00683 0.00 1 1 S 2975739 Streptomyces sp. NBC_00414 0.00 1 1 S 2903644 Streptomyces sp. NBC_00273 0.00 1 1 S 2991496 Streptomyces endophytica 0.00 1 0 G1 2838332 Streptomyces phaeochromogenes group 0.00 1 1 S 1923 Streptomyces phaeochromogenes 0.00 1 1 S 2599401 Streptomyces qinzhouensis 0.00 12 0 O 85006 Micrococcales 0.00 8 0 F 85023 Microbacteriaceae 0.00 5 0 G 33882 Microbacterium 0.00 4 4 S 69362 Microbacterium schleiferi 0.00 1 1 S 84292 Microbacterium chocolatum 0.00 2 0 G 33877 Agromyces 0.00 2 2 S 2929802 Agromyces larvae 0.00 1 1 G 69578 Cryobacterium 0.00 4 0 F 1268 Micrococcaceae 0.00 3 0 G 57493 Kocuria 0.00 3 3 S 388357 Kocuria turfanensis 0.00 1 0 G 596707 Sinomonas 0.00 1 0 G1 2646595 unclassified Sinomonas 0.00 1 1 S 2020377 Sinomonas sp. R1AF57 0.00 6 0 O 85009 Propionibacteriales 0.00 5 0 F 85015 Nocardioidaceae 0.00 5 0 G 1839 Nocardioides 0.00 5 5 S 2558918 Nocardioides cynanchi 0.00 1 0 F 31957 Propionibacteriaceae 0.00 1 0 G 1085622 Propioniciclava 0.00 1 1 S 2775081 Propioniciclava soli 0.00 2 0 O 85008 Micromonosporales 0.00 2 0 F 28056 Micromonosporaceae 0.00 1 0 G 1865 Actinoplanes 0.00 1 0 G1 2626549 unclassified Actinoplanes 0.00 1 1 S 2836373 Actinoplanes sp. L3-i22 0.00 1 0 G 1873 Micromonospora 0.00 1 0 G1 2617518 unclassified Micromonospora 0.00 1 1 S 2975988 Micromonospora sp. NBC_01813 0.00 2 0 O 85010 Pseudonocardiales 0.00 2 0 F 2070 Pseudonocardiaceae 0.00 1 0 G 1851 Saccharomonospora 0.00 1 0 S 632569 Saccharomonospora marina 0.00 1 1 S1 882083 Saccharomonospora marina XMU15 0.00 1 0 G 1813 Amycolatopsis 0.00 1 0 G1 2618356 unclassified Amycolatopsis 0.00 1 1 S 2932773 Amycolatopsis sp. WQ 127309 0.00 2 0 O 85012 Streptosporangiales 0.00 2 0 F 83676 Nocardiopsaceae 0.00 2 2 G 2013 Nocardiopsis 0.00 1 0 O 622452 Kineosporiales 0.00 1 0 F 83778 Kineosporiaceae 0.00 1 0 G 33981 Kineococcus 0.00 1 0 S 131568 Kineococcus radiotolerans 0.00 1 1 S1 266940 Kineococcus radiotolerans SRS30216 = ATCC BAA-149 0.05 691 0 P 1239 Bacillota 0.03 414 0 C 909932 Negativicutes 0.03 414 0 O 1843489 Veillonellales 0.03 414 0 F 31977 Veillonellaceae 0.03 414 0 G 906 Megasphaera 0.03 414 414 S 2144175 Megasphaera stantonii 0.01 141 0 P1 2840488 Bacillota incertae sedis 0.01 141 0 O 3071001 Caldicellulosiruptorales 0.01 141 0 F 3071002 Caldicellulosiruptoraceae 0.01 141 141 G 44000 Caldicellulosiruptor 0.01 95 1 C 91061 Bacilli 0.01 93 1 O 1385 Bacillales 0.00 53 1 F 186817 Bacillaceae 0.00 49 0 G 2837508 Rossellomorea 0.00 49 49 S 189381 Rossellomorea marisflavi 0.00 1 0 G 1386 Bacillus 0.00 1 0 G1 86661 Bacillus cereus group 0.00 1 1 S 1405 Bacillus mycoides 0.00 1 0 G 74385 Gracilibacillus 0.00 1 1 S 2932255 Gracilibacillus salinarum 0.00 1 0 G 2893057 Shouchella 0.00 1 0 S 300825 Shouchella lehensis 0.00 1 1 S1 1246626 Shouchella lehensis G1 0.00 32 0 F 90964 Staphylococcaceae 0.00 32 7 G 1279 Staphylococcus 0.00 20 20 S 1282 Staphylococcus epidermidis 0.00 2 2 S 1288 Staphylococcus xylosus 0.00 1 1 S 3051183 Staphylococcus hsinchuensis 0.00 1 1 S 1286 Staphylococcus simulans 0.00 1 1 S 1280 Staphylococcus aureus 0.00 6 0 F 186822 Paenibacillaceae 0.00 6 0 G 44249 Paenibacillus 0.00 4 1 G1 185978 unclassified Paenibacillus 0.00 1 1 S 3073092 Paenibacillus sp. D2_2 0.00 1 1 S 1695218 Paenibacillus sp. 32O-W 0.00 1 1 S 2282849 Paenibacillus sp. H1-7 0.00 1 1 S 172713 Paenibacillus kribbensis 0.00 1 1 S 189426 Paenibacillus odorifer 0.00 1 0 F 186818 Planococcaceae 0.00 1 0 G 648802 Rummeliibacillus 0.00 1 1 S 241244 Rummeliibacillus stabekisii 0.00 1 0 O 186826 Lactobacillales 0.00 1 0 F 33958 Lactobacillaceae 0.00 1 0 G 46255 Weissella 0.00 1 1 S 137591 Weissella cibaria 0.00 41 0 C 186801 Clostridia 0.00 37 0 O 3085636 Lachnospirales 0.00 37 1 F 186803 Lachnospiraceae 0.00 35 0 G 2383 Candidatus Epulonipiscium 0.00 35 35 S 420336 Candidatus Epulonipiscium viviparus 0.00 1 0 G 1843210 Anaerocolumna 0.00 1 1 S 2696063 Anaerocolumna sedimenticola 0.00 4 0 O 186802 Eubacteriales 0.00 1 0 F 3082771 Acutalibacteraceae 0.00 1 0 G 2576755 Caproicibacter 0.00 1 1 S 2576756 Caproicibacter fermentans 0.00 1 0 F 186806 Eubacteriaceae 0.00 1 0 G 1730 Eubacterium 0.00 1 1 S 39496 Eubacterium ventriosum 0.00 1 0 F 3046368 Aristaeellaceae 0.00 1 0 G 3046369 Aristaeella 0.00 1 1 S 3046383 Aristaeella lactis 0.00 1 0 F 31979 Clostridiaceae 0.00 1 0 G 1485 Clostridium 0.00 1 0 G1 2614128 unclassified Clostridium 0.00 1 1 S 2992805 Clostridium sp. LQ25 0.02 210 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.02 210 0 P 1117 Cyanobacteriota 0.02 210 0 C 3028117 Cyanophyceae 0.01 139 0 O 3079744 Acaryochloridales 0.01 138 0 F 2881378 Thermosynechococcaceae 0.01 138 0 G 146785 Thermosynechococcus 0.01 138 0 G1 2622553 unclassified Thermosynechococcus 0.01 138 138 S 2814275 Thermosynechococcus sp. 0.00 1 0 F 1890429 Acaryochloridaceae 0.00 1 0 G 155977 Acaryochloris 0.00 1 1 S 155978 Acaryochloris marina 0.01 71 0 O 1161 Nostocales 0.01 69 0 F 1162 Nostocaceae 0.01 69 69 G 1177 Nostoc 0.00 2 0 F 1892259 Aphanizomenonaceae 0.00 2 0 G 748770 Dolichospermum 0.00 2 0 G1 2622029 unclassified Dolichospermum 0.00 2 2 S 1914871 Dolichospermum sp. UHCC 0315A 0.00 3 1 P 544448 Mycoplasmatota 0.00 1 0 C 31969 Mollicutes 0.00 1 0 O 2085 Mycoplasmatales 0.00 1 0 F 2092 Mycoplasmataceae 0.00 1 0 G 2093 Mycoplasma 0.00 1 1 S 547987 Mycoplasma tauri 0.00 1 0 O 2790996 Mycoplasmoidales 0.00 1 0 F 2895623 Metamycoplasmataceae 0.00 1 0 G 2923352 Mesomycoplasma 0.00 1 1 S 171286 Mesomycoplasma lagogenitalium 0.02 281 0 D1 2323 Bacteria incertae sedis 0.02 281 0 D2 1783234 Bacteria candidate phyla 0.02 281 0 P 95818 Candidatus Saccharibacteria 0.02 281 0 C 2093818 Candidatus Saccharimonadia 0.02 281 0 O 2093819 Candidatus Nanosynbacterales 0.02 281 0 F 2093822 Candidatus Nanosynbacteraceae 0.02 281 0 G 2093823 Candidatus Nanosynbacter 0.02 281 281 S 2572088 Candidatus Nanosynbacter featherlites 0.00 13 0 P 57723 Acidobacteriota 0.00 13 0 C 204432 Terriglobia 0.00 13 0 O 332160 Bryobacterales 0.00 13 0 F 1962910 Bryobacteraceae 0.00 13 0 G 1649475 Paludibaculum 0.00 13 13 S 1473598 Paludibaculum fermentans 0.00 4 0 P 203691 Spirochaetota 0.00 4 0 C 203692 Spirochaetia 0.00 4 0 O 136 Spirochaetales 0.00 3 0 F 2845253 Treponemataceae 0.00 3 3 G 157 Treponema 0.00 1 0 F 1643685 Borreliaceae 0.00 1 0 G 138 Borrelia 0.00 1 0 S 40834 Borrelia duttonii 0.00 1 1 S1 412419 Borrelia duttonii Ly 0.00 3 0 P 29547 Campylobacterota 0.00 3 0 C 3031852 Epsilonproteobacteria 0.00 3 0 O 213849 Campylobacterales 0.00 2 0 F 72293 Helicobacteraceae 0.00 2 0 G 209 Helicobacter 0.00 1 1 S 213 Helicobacter cinaedi 0.00 1 1 S 210 Helicobacter pylori 0.00 1 0 F 2932623 Sulfurospirillaceae 0.00 1 0 G 57665 Sulfurospirillum 0.00 1 1 G1 2618290 unclassified Sulfurospirillum 0.00 2 0 P 40117 Nitrospirota 0.00 2 0 C 203693 Nitrospiria 0.00 2 0 O 189778 Nitrospirales 0.00 2 0 F 189779 Nitrospiraceae 0.00 2 0 G 1234 Nitrospira 0.00 2 2 S 2973512 Nitrospira tepida 0.00 1 0 D1 1783257 PVC group 0.00 1 0 P 203682 Planctomycetota 0.00 1 0 C 203683 Planctomycetia 0.00 1 0 O 112 Planctomycetales 0.00 1 0 F 126 Planctomycetaceae 0.00 1 0 G 3132181 Planctoellipticum 0.00 1 1 S 3064265 Planctoellipticum variicoloris 0.00 3 0 D 2157 Archaea 0.00 2 0 D1 1783275 TACK group 0.00 2 0 P 28889 Thermoproteota 0.00 2 0 C 183924 Thermoprotei 0.00 2 0 O 2281 Sulfolobales 0.00 2 0 F 118883 Sulfolobaceae 0.00 2 0 G 12914 Acidianus 0.00 2 0 G1 2629519 unclassified Acidianus 0.00 2 2 S 2886040 Acidianus sp. HS-5 0.00 1 0 P 28890 Euryarchaeota 0.00 1 0 P1 2290931 Stenosarchaea group 0.00 1 0 C 183963 Halobacteria 0.00 1 0 O 2235 Halobacteriales 0.00 1 0 F 1644056 Haloferacaceae 0.00 1 0 G 1073986 Halobellus 0.00 1 0 G1 2638438 unclassified Halobellus 0.00 1 1 S 3075123 Halobellus sp. DFY28 0.00 35 0 D 10239 Viruses 0.00 31 0 D1 2731341 Duplodnaviria 0.00 31 0 K 2731360 Heunggongvirae 0.00 31 0 P 2731618 Uroviricota 0.00 31 0 C 2731619 Caudoviricetes 0.00 30 0 G 3044764 Midgardsormrvirus 0.00 30 0 S 3060306 Midgardsormrvirus midgardsormr38 0.00 30 30 S1 2663326 Erwinia phage Midgardsormr38 0.00 1 0 G 3044856 Wolominvirus 0.00 1 0 S 3060805 Wolominvirus OH 0.00 1 1 S1 2712957 Ochrobactrum phage vB_OspP_OH 0.00 4 0 D1 2731342 Monodnaviria 0.00 4 0 K 2732091 Sangervirae 0.00 4 0 P 2732412 Phixviricota 0.00 4 0 C 2732413 Malgrandaviricetes 0.00 4 0 O 2732414 Petitvirales 0.00 4 0 F 10841 Microviridae 0.00 4 0 F1 1910950 Bullavirinae 0.00 2 0 G 1910954 Sinsheimervirus 0.00 2 0 S 10847 Sinsheimervirus phiX174 0.00 2 2 S1 2886930 Escherichia phage phiX174 0.00 1 1 G 1910951 Alphatrevirus 0.00 1 0 G 1910952 Gequatrovirus 0.00 1 0 S 1910969 Gequatrovirus talmos 0.00 1 1 S1 511969 Escherichia phage ID2 Moscow/ID/2001