0.03 32 32 U 0 unclassified 99.97 108356 6 R 1 root 99.89 108264 0 R1 131567 cellular organisms 99.89 108264 97568 D 2 Bacteria 9.07 9829 171 P 1224 Pseudomonadota 8.85 9592 4828 C 1236 Gammaproteobacteria 4.04 4376 0 O 135614 Lysobacterales 4.04 4376 0 F 32033 Lysobacteraceae 4.04 4376 1 G 40323 Stenotrophomonas 4.04 4375 0 G1 995085 Stenotrophomonas maltophilia group 4.04 4375 4375 S 40324 Stenotrophomonas maltophilia 0.23 251 2 O 91347 Enterobacterales 0.22 243 0 F 543 Enterobacteriaceae 0.13 143 0 F1 2890311 Klebsiella/Raoultella group 0.13 143 1 G 570 Klebsiella 0.13 141 141 S 573 Klebsiella pneumoniae 0.00 1 1 S 2058152 Klebsiella grimontii 0.09 97 0 G 547 Enterobacter 0.09 96 0 G1 2608935 unclassified Enterobacter 0.09 96 96 S 2707174 Enterobacter sp. T2 0.00 1 0 G1 354276 Enterobacter cloacae complex 0.00 1 0 S 158836 Enterobacter hormaechei 0.00 1 1 S1 1296536 Enterobacter hormaechei subsp. xiangfangensis 0.00 2 0 G 561 Escherichia 0.00 2 2 S 562 Escherichia coli 0.00 1 0 G 590 Salmonella 0.00 1 0 S 28901 Salmonella enterica 0.00 1 0 S1 59201 Salmonella enterica subsp. enterica 0.00 1 1 S2 58712 Salmonella enterica subsp. enterica serovar Anatum 0.00 5 0 F 1903414 Morganellaceae 0.00 5 0 G 626 Xenorhabdus 0.00 4 4 S 628 Xenorhabdus nematophila 0.00 1 1 S 40576 Xenorhabdus bovienii 0.00 1 0 F 1903411 Yersiniaceae 0.00 1 0 G 613 Serratia 0.00 1 1 S 47917 Serratia fonticola 0.11 120 0 O 72274 Pseudomonadales 0.11 120 0 F 135621 Pseudomonadaceae 0.11 120 0 G 286 Pseudomonas 0.11 117 0 G1 196821 unclassified Pseudomonas 0.11 117 117 S 2892442 Pseudomonas sp. CIP-10 0.00 2 0 G1 136843 Pseudomonas fluorescens group 0.00 1 1 S 298 Pseudomonas marginalis 0.00 1 1 S 47878 Pseudomonas azotoformans 0.00 1 0 G1 136845 Pseudomonas putida group 0.00 1 1 S 303 Pseudomonas putida 0.01 7 0 O 135622 Alteromonadales 0.01 6 0 F 267888 Pseudoalteromonadaceae 0.01 6 0 G 53246 Pseudoalteromonas 0.01 6 0 G1 194690 unclassified Pseudoalteromonas 0.01 6 6 S 649161 Pseudoalteromonas sp. 3J6 0.00 1 0 F 267890 Shewanellaceae 0.00 1 0 G 22 Shewanella 0.00 1 0 G1 196818 unclassified Shewanella 0.00 1 1 S 2698686 Shewanella sp. Arc9-LZ 0.01 6 0 O 135623 Vibrionales 0.01 6 0 F 641 Vibrionaceae 0.01 6 0 G 662 Vibrio 0.00 4 4 S 55601 Vibrio anguillarum 0.00 1 1 S 672 Vibrio vulnificus 0.00 1 0 G1 2614977 unclassified Vibrio 0.00 1 1 S 2751179 Vibrio sp. B1REV9 0.00 2 0 O 135625 Pasteurellales 0.00 2 0 F 712 Pasteurellaceae 0.00 2 0 G 724 Haemophilus 0.00 1 1 S 729 Haemophilus parainfluenzae 0.00 1 1 S 730 [Haemophilus] ducreyi 0.00 1 0 O 2887326 Moraxellales 0.00 1 0 F 468 Moraxellaceae 0.00 1 0 G 469 Acinetobacter 0.00 1 0 G1 196816 unclassified Acinetobacter 0.00 1 1 S 1608473 Acinetobacter sp. NCu2D-2 0.00 1 0 O 135618 Methylococcales 0.00 1 0 F 403 Methylococcaceae 0.00 1 0 G 429 Methylobacter 0.00 1 0 G1 2635283 unclassified Methylobacter 0.00 1 1 S 2911520 Methylobacter sp. YRD-M1 0.05 59 0 C 28211 Alphaproteobacteria 0.05 51 0 O 356 Hyphomicrobiales 0.04 38 0 F 118882 Brucellaceae 0.04 38 0 F1 2826938 Brucella/Ochrobactrum group 0.04 38 0 G 234 Brucella 0.04 38 0 G1 2632610 unclassified Brucella 0.04 38 38 S 2975050 Brucella sp. 1315 0.01 7 0 F 772 Bartonellaceae 0.01 7 0 G 773 Bartonella 0.01 7 7 S 2267275 Bartonella krasnovii 0.00 5 0 F 119045 Methylobacteriaceae 0.00 5 0 G 407 Methylobacterium 0.00 5 5 S 270351 Methylobacterium aquaticum 0.00 1 0 F 335928 Xanthobacteraceae 0.00 1 0 G 279 Xanthobacter 0.00 1 1 S 280 Xanthobacter autotrophicus 0.00 5 0 O 766 Rickettsiales 0.00 4 0 F 942 Anaplasmataceae 0.00 4 0 G 943 Ehrlichia 0.00 4 0 G1 106178 canis group 0.00 4 4 S 779 Ehrlichia ruminantium 0.00 1 0 F 775 Rickettsiaceae 0.00 1 0 F1 33988 Rickettsieae 0.00 1 0 G 2996317 Candidatus Tisiphia 0.00 1 1 G1 2996318 unclassified Candidatus Tisiphia 0.00 2 0 O 204441 Rhodospirillales 0.00 1 0 F 2829815 Azospirillaceae 0.00 1 0 G 191 Azospirillum 0.00 1 1 S 1064539 Azospirillum baldaniorum 0.00 1 0 F 3031143 Magnetovibrionaceae 0.00 1 0 G 1866954 Varunaivibrio 0.00 1 1 S 1773489 Varunaivibrio sulfuroxidans 0.00 1 0 O 2800060 Hyphomonadales 0.00 1 0 F 69657 Hyphomonadaceae 0.00 1 0 G 85 Hyphomonas 0.00 1 0 G1 225297 environmental samples 0.00 1 1 S 225298 uncultured Hyphomonas sp. 0.01 7 1 C 28216 Betaproteobacteria 0.01 6 0 O 80840 Burkholderiales 0.00 4 0 F 119060 Burkholderiaceae 0.00 3 0 G 106589 Cupriavidus 0.00 3 3 S 164546 Cupriavidus taiwanensis 0.00 1 0 G 48736 Ralstonia 0.00 1 0 G1 3116862 Ralstonia solanacearum species complex 0.00 1 1 S 305 Ralstonia solanacearum 0.00 1 0 F 506 Alcaligenaceae 0.00 1 0 G 305976 Pusillimonas 0.00 1 0 G1 2640016 unclassified Pusillimonas 0.00 1 1 S 1007105 Pusillimonas sp. T7-7 0.00 1 0 F 995019 Sutterellaceae 0.00 1 0 G 40544 Sutterella 0.00 1 1 S 40545 Sutterella wadsworthensis 0.61 659 0 D1 1783272 Terrabacteria group 0.55 600 1 P 1239 Bacillota 0.48 522 0 C 91061 Bacilli 0.48 517 2 O 1385 Bacillales 0.29 314 0 F 186817 Bacillaceae 0.29 313 0 G 1386 Bacillus 0.28 307 3 G1 86661 Bacillus cereus group 0.23 250 250 S 1396 Bacillus cereus 0.05 54 54 S 1392 Bacillus anthracis 0.00 5 0 G1 653685 Bacillus subtilis group 0.00 3 3 S 1423 Bacillus subtilis 0.00 2 0 G2 1938374 Bacillus amyloliquefaciens group 0.00 2 2 S 492670 Bacillus velezensis 0.00 1 1 S 561879 Bacillus safensis 0.00 1 0 G 400634 Lysinibacillus 0.00 1 1 S 28031 Lysinibacillus fusiformis 0.18 199 0 F 90964 Staphylococcaceae 0.18 199 0 G 1279 Staphylococcus 0.18 198 198 S 1280 Staphylococcus aureus 0.00 1 1 S 1288 Staphylococcus xylosus 0.00 1 0 F 186820 Listeriaceae 0.00 1 0 G 1637 Listeria 0.00 1 1 S 1639 Listeria monocytogenes 0.00 1 0 F 186822 Paenibacillaceae 0.00 1 0 G 44249 Paenibacillus 0.00 1 1 G1 185978 unclassified Paenibacillus 0.00 5 0 O 186826 Lactobacillales 0.00 2 0 F 81852 Enterococcaceae 0.00 2 0 G 1350 Enterococcus 0.00 2 2 S 1351 Enterococcus faecalis 0.00 1 0 F 1300 Streptococcaceae 0.00 1 0 G 1301 Streptococcus 0.00 1 0 S 1308 Streptococcus thermophilus 0.00 1 1 S1 767463 Streptococcus thermophilus ND03 0.00 1 0 F 33958 Lactobacillaceae 0.00 1 0 G 2759736 Lacticaseibacillus 0.00 1 1 S 57037 Lacticaseibacillus zeae 0.00 1 0 F 186828 Carnobacteriaceae 0.00 1 0 G 1470540 Jeotgalibaca 0.00 1 0 G1 2621505 unclassified Jeotgalibaca 0.00 1 1 S 1903686 Jeotgalibaca sp. PTS2502 0.07 71 1 C 186801 Clostridia 0.04 41 0 O 186802 Eubacteriales 0.02 21 0 F 31979 Clostridiaceae 0.02 21 1 G 1485 Clostridium 0.02 19 19 S 1491 Clostridium botulinum 0.00 1 0 G1 2614128 unclassified Clostridium 0.00 1 1 S 1155388 Clostridium sp. C1 0.02 17 0 F 216572 Oscillospiraceae 0.01 8 8 G 216851 Faecalibacterium 0.00 5 0 G 35829 Acetivibrio 0.00 5 0 S 288965 Acetivibrio clariflavus 0.00 5 5 S1 720554 Acetivibrio clariflavus DSM 19732 0.00 3 3 G 2892396 Vescimonas 0.00 1 1 G 292632 Subdoligranulum 0.00 1 0 F 3085642 Butyricicoccaceae 0.00 1 0 G 1928820 Intestinibacillus 0.00 1 0 G1 2635293 unclassified Intestinibacillus 0.00 1 1 S 3079303 Intestinibacillus sp. NTUH-41-i26 0.00 1 0 F 186806 Eubacteriaceae 0.00 1 0 G 33951 Acetobacterium 0.00 1 1 S 52694 Acetobacterium wieringae 0.00 1 0 O1 538999 Eubacteriales incertae sedis 0.00 1 1 G 1686313 Fenollaria 0.02 19 0 O 3085636 Lachnospirales 0.02 18 4 F 186803 Lachnospiraceae 0.00 4 0 G 2316020 Mediterraneibacter 0.00 3 3 S 33038 Mediterraneibacter gnavus 0.00 1 1 S 33039 [Ruminococcus] torques 0.00 2 1 G 572511 Blautia 0.00 1 1 S 2779518 Blautia liquoris 0.00 2 0 G 248744 Marvinbryantia 0.00 2 0 S 168384 Marvinbryantia formatexigens 0.00 2 2 S1 478749 Marvinbryantia formatexigens DSM 14469 0.00 1 0 G 841 Roseburia 0.00 1 1 S 301301 Roseburia hominis 0.00 1 0 G 3088373 Chakrabartyella 0.00 1 1 S 2918914 Chakrabartyella piscis 0.00 1 0 G 2163168 Kineothrix 0.00 1 0 G1 2625420 unclassified Kineothrix 0.00 1 1 S 3070215 Kineothrix sp. MB12-C1 0.00 1 0 G 1766253 Agathobacter 0.00 1 1 S 39491 Agathobacter rectalis 0.00 1 1 G 33042 Coprococcus 0.00 1 0 G 207244 Anaerostipes 0.00 1 1 S 1229621 Anaerostipes rhamnosivorans 0.00 1 0 F 3018741 Cellulosilyticaceae 0.00 1 1 G 698776 Cellulosilyticum 0.01 10 0 O 3082720 Peptostreptococcales 0.01 10 0 F 186804 Peptostreptococcaceae 0.01 10 0 G 1849822 Paraclostridium 0.01 10 10 S 1505 Paraclostridium sordellii 0.01 6 0 C 1737404 Tissierellia 0.00 5 0 O 1737405 Tissierellales 0.00 5 0 F 1570339 Peptoniphilaceae 0.00 5 0 G 31983 Helcococcus 0.00 5 5 S 40091 Helcococcus kunzii 0.00 1 0 C1 1737407 Tissierellia incertae sedis 0.00 1 1 G 1582879 Ezakiella 0.05 56 0 P 201174 Actinomycetota 0.05 56 0 C 1760 Actinomycetes 0.04 47 0 O 85011 Kitasatosporales 0.04 47 0 F 2062 Streptomycetaceae 0.04 47 4 G 1883 Streptomyces 0.02 26 0 G1 2593676 unclassified Streptomyces 0.01 12 12 S 2099583 Streptomyces sp. ICC1 0.01 7 7 S 477697 Streptomyces sp. T12 0.00 5 5 S 2099584 Streptomyces sp. ICC4 0.00 1 1 S 2933779 Streptomyces sp. WAC00303 0.00 1 1 S 2750025 Streptomyces sp. CB00271 0.01 9 9 S 83291 Streptomyces armeniacus 0.01 6 0 G1 2867164 Streptomyces rochei group 0.01 6 6 S 67376 Streptomyces vinaceusdrappus 0.00 1 1 S 436397 Streptomyces sudanensis 0.00 1 1 S 83656 Streptomyces tsukubensis 0.00 4 0 O 85004 Bifidobacteriales 0.00 4 0 F 31953 Bifidobacteriaceae 0.00 4 4 G 1678 Bifidobacterium 0.00 3 0 O 85007 Mycobacteriales 0.00 1 0 F 1653 Corynebacteriaceae 0.00 1 0 G 1716 Corynebacterium 0.00 1 1 S 43770 Corynebacterium striatum 0.00 1 0 F 1762 Mycobacteriaceae 0.00 1 0 G 1763 Mycobacterium 0.00 1 0 G1 77643 Mycobacterium tuberculosis complex 0.00 1 1 S 78331 Mycobacterium canetti 0.00 1 0 F 85026 Gordoniaceae 0.00 1 0 G 2053 Gordonia 0.00 1 1 S 40516 Gordonia hydrophobica 0.00 1 0 O 2037 Actinomycetales 0.00 1 0 F 2049 Actinomycetaceae 0.00 1 0 G 2692113 Gleimia 0.00 1 1 S 66228 Gleimia europaea 0.00 1 0 O 85009 Propionibacteriales 0.00 1 0 F 85015 Nocardioidaceae 0.00 1 0 G 1839 Nocardioides 0.00 1 1 S 2575440 Nocardioides jishulii 0.00 2 0 P 544448 Mycoplasmatota 0.00 2 0 C 31969 Mollicutes 0.00 1 0 O 2085 Mycoplasmatales 0.00 1 0 F 2092 Mycoplasmataceae 0.00 1 0 G 2093 Mycoplasma 0.00 1 0 G1 656088 Mycoplasma mycoides group 0.00 1 0 S 2102 Mycoplasma mycoides 0.00 1 1 S1 40477 Mycoplasma mycoides subsp. capri 0.00 1 0 O 186328 Entomoplasmatales 0.00 1 0 F 2131 Spiroplasmataceae 0.00 1 0 G 2132 Spiroplasma 0.00 1 1 S 2133 Spiroplasma citri 0.00 1 0 P 200795 Chloroflexota 0.00 1 0 C 2682225 Tepidiformia 0.00 1 0 O 2682226 Tepidiformales 0.00 1 0 F 2682227 Tepidiformaceae 0.00 1 1 G 2682228 Tepidiforma 0.10 106 0 D1 1783270 FCB group 0.10 106 0 D2 68336 Bacteroidota/Chlorobiota group 0.10 106 2 P 976 Bacteroidota 0.08 87 0 C 200643 Bacteroidia 0.08 87 2 O 171549 Bacteroidales 0.03 37 2 F 815 Bacteroidaceae 0.02 24 4 G 816 Bacteroides 0.02 17 17 S 246787 Bacteroides cellulosilyticus 0.00 1 1 S 820 Bacteroides uniformis 0.00 1 1 S 28111 Bacteroides eggerthii 0.00 1 1 S 338188 Bacteroides finegoldii 0.01 11 3 G 909656 Phocaeicola 0.00 4 0 S 376805 Phocaeicola salanitronis 0.00 4 4 S1 667015 Phocaeicola salanitronis DSM 18170 0.00 2 2 S 821 Phocaeicola vulgatus 0.00 2 2 S 387090 Phocaeicola coprophilus 0.03 29 0 F 171550 Rikenellaceae 0.03 28 0 G 1647173 Acetobacteroides 0.03 28 0 G1 1760810 environmental samples 0.03 28 28 S 1760811 uncultured Acetobacteroides sp. 0.00 1 0 G 239759 Alistipes 0.00 1 1 S 626932 Alistipes indistinctus 0.01 14 3 F 171552 Prevotellaceae 0.01 10 4 G 2974251 Segatella 0.00 5 5 S 165179 Segatella copri 0.00 1 1 S 2518605 Segatella hominis 0.00 1 0 G 558436 Xylanibacter 0.00 1 1 S 839 Xylanibacter ruminicola 0.00 3 0 F 2005525 Tannerellaceae 0.00 2 0 G 375288 Parabacteroides 0.00 1 1 S 328812 Parabacteroides goldsteinii 0.00 1 0 G1 2649774 unclassified Parabacteroides 0.00 1 1 S 2951805 Parabacteroides sp. AD58 0.00 1 1 G 195950 Tannerella 0.00 1 0 F 1853231 Odoribacteraceae 0.00 1 0 G 283168 Odoribacter 0.00 1 1 S 28118 Odoribacter splanchnicus 0.00 1 0 F 2005520 Dysgonomonadaceae 0.00 1 0 G 307628 Petrimonas 0.00 1 1 S 1642646 Petrimonas mucosa 0.01 16 0 C 117743 Flavobacteriia 0.01 16 0 O 200644 Flavobacteriales 0.01 13 0 F 2762318 Weeksellaceae 0.01 13 13 G 308865 Elizabethkingia 0.00 3 0 F 49546 Flavobacteriaceae 0.00 3 0 G 237 Flavobacterium 0.00 3 3 S 96345 Flavobacterium psychrophilum 0.00 1 0 C 768503 Cytophagia 0.00 1 0 O 768507 Cytophagales 0.00 1 0 F 89373 Cytophagaceae 0.00 1 0 G 107 Spirosoma 0.00 1 1 S 2898794 Spirosoma oryzicola 0.05 58 0 P 29547 Campylobacterota 0.05 58 0 C 3031852 Epsilonproteobacteria 0.05 58 50 O 213849 Campylobacterales 0.01 8 0 F 72294 Campylobacteraceae 0.01 8 0 G 194 Campylobacter 0.01 6 0 G1 2593542 unclassified Campylobacter 0.01 6 6 S 1032243 Campylobacter sp. RM6914 0.00 1 1 S 2505970 Campylobacter armoricus 0.00 1 1 S 827 Campylobacter ureolyticus 0.02 21 0 P 203691 Spirochaetota 0.02 21 0 C 203692 Spirochaetia 0.02 21 0 O 136 Spirochaetales 0.02 19 0 F 1643685 Borreliaceae 0.02 18 0 G 64895 Borreliella 0.02 18 18 S 29519 Borreliella garinii 0.00 1 0 G 138 Borrelia 0.00 1 0 G1 2649934 unclassified Borrelia 0.00 1 1 S 3058374 Borrelia sp. P9F1 0.00 2 0 F 2845253 Treponemataceae 0.00 2 0 G 157 Treponema 0.00 2 2 S 158 Treponema denticola 0.02 19 0 P 32066 Fusobacteriota 0.02 19 0 C 203490 Fusobacteriia 0.02 19 0 O 203491 Fusobacteriales 0.02 19 0 F 203492 Fusobacteriaceae 0.02 19 19 G 848 Fusobacterium 0.00 2 0 P 2818505 Myxococcota 0.00 1 0 C 32015 Myxococcia 0.00 1 0 O 29 Myxococcales 0.00 1 0 O1 80811 Cystobacterineae 0.00 1 0 F 31 Myxococcaceae 0.00 1 0 G 224458 Pyxidicoccus 0.00 1 1 S 2813578 Pyxidicoccus parkwaysis 0.00 1 0 P1 3031711 Polyangia 0.00 1 0 O 3031712 Polyangiales 0.00 1 0 F 1055686 Sandaracinaceae 0.00 1 0 G 1055688 Sandaracinus 0.00 1 1 S 927083 Sandaracinus amylolyticus 0.00 2 0 D1 1783257 PVC group 0.00 2 0 P 74201 Verrucomicrobiota 0.00 1 0 C 203494 Verrucomicrobiia 0.00 1 0 O 48461 Verrucomicrobiales 0.00 1 0 F 1647988 Akkermansiaceae 0.00 1 1 G 239934 Akkermansia 0.00 1 0 P1 326457 Verrucomicrobiota incertae sedis 0.00 1 0 G 1541670 Methylacidimicrobium 0.00 1 0 G1 2730358 unclassified Methylacidimicrobium 0.00 1 1 S 2730359 Methylacidimicrobium sp. AP8 0.08 86 0 D 10239 Viruses 0.08 86 0 D1 2559587 Riboviria 0.08 86 0 K 2732396 Orthornavirae 0.08 86 0 P 2732408 Pisuviricota 0.08 86 0 C 2732506 Pisoniviricetes 0.08 86 0 O 76804 Nidovirales 0.08 86 0 O1 2499399 Cornidovirineae 0.08 86 0 F 11118 Coronaviridae 0.08 86 0 F1 2501931 Orthocoronavirinae 0.08 86 0 G 694002 Betacoronavirus 0.08 86 0 G1 2509511 Sarbecovirus 0.08 86 2 S 694009 Severe acute respiratory syndrome-related coronavirus 0.08 84 0 S1 2901879 Severe acute respiratory syndrome coronavirus 0.08 84 84 S2 227984 SARS coronavirus Tor2