5.79 223 223 U 0 unclassified 94.21 3628 2 R 1 root 93.92 3617 0 R1 131567 cellular organisms 93.92 3617 199 D 2 Bacteria 83.33 3209 107 P 1224 Pseudomonadota 79.98 3080 2713 C 1236 Gammaproteobacteria 5.61 216 0 O 135614 Lysobacterales 5.61 216 0 F 32033 Lysobacteraceae 5.58 215 0 G 40323 Stenotrophomonas 5.58 215 0 G1 995085 Stenotrophomonas maltophilia group 5.58 215 215 S 40324 Stenotrophomonas maltophilia 0.03 1 0 G 68 Lysobacter 0.03 1 0 G1 2635362 unclassified Lysobacter 0.03 1 1 S 2925843 Lysobacter sp. S4-A87 2.93 113 0 O 72274 Pseudomonadales 2.93 113 0 F 135621 Pseudomonadaceae 2.93 113 0 G 286 Pseudomonas 2.86 110 0 G1 196821 unclassified Pseudomonas 2.86 110 110 S 2892442 Pseudomonas sp. CIP-10 0.05 2 0 G1 136843 Pseudomonas fluorescens group 0.05 2 2 S 298 Pseudomonas marginalis 0.03 1 0 G1 136841 Pseudomonas aeruginosa group 0.03 1 1 S 287 Pseudomonas aeruginosa 0.49 19 2 O 91347 Enterobacterales 0.42 16 1 F 543 Enterobacteriaceae 0.18 7 0 G 561 Escherichia 0.18 7 7 S 562 Escherichia coli 0.08 3 0 G 547 Enterobacter 0.08 3 0 G1 2608935 unclassified Enterobacter 0.08 3 3 S 2707174 Enterobacter sp. T2 0.08 3 0 G 590 Salmonella 0.08 3 0 S 28901 Salmonella enterica 0.08 3 0 S1 59201 Salmonella enterica subsp. enterica 0.05 2 2 S2 58712 Salmonella enterica subsp. enterica serovar Anatum 0.03 1 1 S2 29474 Salmonella enterica subsp. enterica serovar California 0.05 2 0 F1 2890311 Klebsiella/Raoultella group 0.05 2 0 G 570 Klebsiella 0.03 1 1 S 244366 Klebsiella variicola 0.03 1 1 S 1134687 Klebsiella michiganensis 0.03 1 0 F 1903411 Yersiniaceae 0.03 1 0 G 613 Serratia 0.03 1 1 S 615 Serratia marcescens 0.31 12 0 O 135625 Pasteurellales 0.31 12 0 F 712 Pasteurellaceae 0.29 11 0 G 2094023 Glaesserella 0.29 11 11 S 738 Glaesserella parasuis 0.03 1 0 G 214906 Histophilus 0.03 1 1 S 731 Histophilus somni 0.08 3 0 O 135622 Alteromonadales 0.08 3 0 F 267888 Pseudoalteromonadaceae 0.08 3 0 G 53246 Pseudoalteromonas 0.08 3 0 G1 194690 unclassified Pseudoalteromonas 0.08 3 3 S 649161 Pseudoalteromonas sp. 3J6 0.05 2 0 O 72273 Thiotrichales 0.05 2 1 F 34064 Francisellaceae 0.03 1 1 G 262 Francisella 0.03 1 0 O 135623 Vibrionales 0.03 1 0 F 641 Vibrionaceae 0.03 1 0 G 662 Vibrio 0.03 1 1 S 55601 Vibrio anguillarum 0.03 1 0 O 135624 Aeromonadales 0.03 1 0 F 84642 Aeromonadaceae 0.03 1 1 G 642 Aeromonas 0.44 17 0 C 28216 Betaproteobacteria 0.39 15 0 O 80840 Burkholderiales 0.39 15 0 F 506 Alcaligenaceae 0.39 15 0 G 517 Bordetella 0.39 15 15 S 518 Bordetella bronchiseptica 0.05 2 0 O 206351 Neisseriales 0.05 2 1 F 481 Neisseriaceae 0.03 1 0 G 482 Neisseria 0.03 1 1 S 28449 Neisseria subflava 0.13 5 0 C 28211 Alphaproteobacteria 0.08 3 0 O 356 Hyphomicrobiales 0.05 2 0 F 335928 Xanthobacteraceae 0.05 2 0 G 279 Xanthobacter 0.05 2 2 S 280 Xanthobacter autotrophicus 0.03 1 0 F 31993 Methylocystaceae 0.03 1 0 G 425 Methylosinus 0.03 1 0 G1 2624500 unclassified Methylosinus 0.03 1 1 S 2699395 Methylosinus sp. C49 0.03 1 0 O 204441 Rhodospirillales 0.03 1 0 F 2829815 Azospirillaceae 0.03 1 0 G 191 Azospirillum 0.03 1 1 S 1064539 Azospirillum baldaniorum 0.03 1 0 O 204458 Caulobacterales 0.03 1 0 F 76892 Caulobacteraceae 0.03 1 0 G 41275 Brevundimonas 0.03 1 1 S 172043 Brevundimonas nasdae 5.06 195 35 D1 1783272 Terrabacteria group 3.61 139 0 P 1239 Bacillota 3.45 133 1 C 91061 Bacilli 3.04 117 0 O 1385 Bacillales 2.80 108 0 F 186817 Bacillaceae 2.75 106 0 G 1386 Bacillus 2.70 104 0 G1 86661 Bacillus cereus group 2.70 104 104 S 1396 Bacillus cereus 0.05 2 0 G1 653685 Bacillus subtilis group 0.03 1 1 S 1423 Bacillus subtilis 0.03 1 0 G2 1938374 Bacillus amyloliquefaciens group 0.03 1 1 S 492670 Bacillus velezensis 0.05 2 0 G 2837504 Heyndrickxia 0.05 2 2 S 1476025 Heyndrickxia vini 0.23 9 0 F 90964 Staphylococcaceae 0.23 9 0 G 1279 Staphylococcus 0.21 8 8 S 1280 Staphylococcus aureus 0.03 1 1 S 46127 Staphylococcus felis 0.39 15 0 O 186826 Lactobacillales 0.39 15 0 F 33958 Lactobacillaceae 0.39 15 2 G 1578 Lactobacillus 0.16 6 6 S 147802 Lactobacillus iners 0.05 2 2 S 1587 Lactobacillus helveticus 0.05 2 1 G1 2620435 unclassified Lactobacillus 0.03 1 1 S 2594495 Lactobacillus sp. PV034 0.03 1 1 S 1600 Lactobacillus acetotolerans 0.03 1 1 S 47770 Lactobacillus crispatus 0.03 1 1 S 1579 Lactobacillus acidophilus 0.16 6 2 C 186801 Clostridia 0.08 3 0 O 186802 Eubacteriales 0.05 2 0 F 31979 Clostridiaceae 0.05 2 0 G 1485 Clostridium 0.03 1 0 G1 2614128 unclassified Clostridium 0.03 1 1 S 97138 Clostridium sp. MD294 0.03 1 1 S 1561 Clostridium baratii 0.03 1 0 F 216572 Oscillospiraceae 0.03 1 0 G 216851 Faecalibacterium 0.03 1 1 S 853 Faecalibacterium prausnitzii 0.03 1 0 O 3085656 Monoglobales 0.03 1 0 F 3085657 Monoglobaceae 0.03 1 0 G 2039302 Monoglobus 0.03 1 1 S 1981510 Monoglobus pectinilyticus 0.49 19 0 P 201174 Actinomycetota 0.49 19 0 C 1760 Actinomycetes 0.39 15 0 O 85011 Kitasatosporales 0.39 15 0 F 2062 Streptomycetaceae 0.36 14 2 G 1883 Streptomyces 0.26 10 0 G1 2593676 unclassified Streptomyces 0.13 5 5 S 2099583 Streptomyces sp. ICC1 0.08 3 3 S 2933779 Streptomyces sp. WAC00303 0.05 2 2 S 2099584 Streptomyces sp. ICC4 0.03 1 1 S 83291 Streptomyces armeniacus 0.03 1 0 G1 2867164 Streptomyces rochei group 0.03 1 1 S 67376 Streptomyces vinaceusdrappus 0.03 1 0 G 2995702 Actinacidiphila 0.03 1 1 S 235986 Actinacidiphila glaucinigra 0.05 2 0 O 85004 Bifidobacteriales 0.05 2 1 F 31953 Bifidobacteriaceae 0.03 1 1 G 1678 Bifidobacterium 0.03 1 0 O 2037 Actinomycetales 0.03 1 0 F 2049 Actinomycetaceae 0.03 1 0 G 1654 Actinomyces 0.03 1 1 S 111015 Actinomyces radicidentis 0.03 1 0 O 85007 Mycobacteriales 0.03 1 0 F 1762 Mycobacteriaceae 0.03 1 0 G 1866885 Mycolicibacterium 0.03 1 1 S 39687 Mycolicibacterium austroafricanum 0.03 1 0 P 544448 Mycoplasmatota 0.03 1 0 O 2790996 Mycoplasmoidales 0.03 1 0 F 2790998 Mycoplasmoidaceae 0.03 1 0 G 2995234 Mycoplasmoides 0.03 1 1 S 2097 Mycoplasmoides genitalium 0.03 1 0 P 3027942 Thermomicrobiota 0.03 1 0 C 189775 Thermomicrobia 0.03 1 0 O 189776 Thermomicrobiales 0.03 1 0 F 189777 Thermomicrobiaceae 0.03 1 0 G 499 Thermomicrobium 0.03 1 0 S 500 Thermomicrobium roseum 0.03 1 1 S1 309801 Thermomicrobium roseum DSM 5159 0.21 8 0 D1 1783270 FCB group 0.21 8 0 D2 68336 Bacteroidota/Chlorobiota group 0.21 8 0 P 976 Bacteroidota 0.16 6 0 C 200643 Bacteroidia 0.16 6 0 O 171549 Bacteroidales 0.08 3 0 F 815 Bacteroidaceae 0.05 2 1 G 909656 Phocaeicola 0.03 1 0 S 376805 Phocaeicola salanitronis 0.03 1 1 S1 667015 Phocaeicola salanitronis DSM 18170 0.03 1 0 G 816 Bacteroides 0.03 1 1 S 820 Bacteroides uniformis 0.05 2 0 F 171552 Prevotellaceae 0.05 2 0 G 838 Prevotella 0.03 1 1 S 28125 Prevotella bivia 0.03 1 0 S 589437 Prevotella scopos 0.03 1 1 S1 1236518 Prevotella scopos JCM 17725 0.03 1 0 F 171550 Rikenellaceae 0.03 1 0 G 1647173 Acetobacteroides 0.03 1 0 G1 1760810 environmental samples 0.03 1 1 S 1760811 uncultured Acetobacteroides sp. 0.05 2 0 C 117743 Flavobacteriia 0.05 2 0 O 200644 Flavobacteriales 0.03 1 0 F 39782 Blattabacteriaceae 0.03 1 0 G 34098 Blattabacterium 0.03 1 1 S 1653831 Blattabacterium cuenoti 0.03 1 0 F 49546 Flavobacteriaceae 0.03 1 1 G 52959 Polaribacter 0.10 4 0 P 203691 Spirochaetota 0.10 4 0 C 203692 Spirochaetia 0.10 4 0 O 136 Spirochaetales 0.10 4 0 F 1643685 Borreliaceae 0.10 4 0 G 64895 Borreliella 0.10 4 4 S 29519 Borreliella garinii 0.03 1 0 P 29547 Campylobacterota 0.03 1 0 C 3031852 Epsilonproteobacteria 0.03 1 0 O 213849 Campylobacterales 0.03 1 0 F 72294 Campylobacteraceae 0.03 1 0 G 194 Campylobacter 0.03 1 1 S 374106 Campylobacter cuniculorum 0.03 1 0 P 2818505 Myxococcota 0.03 1 0 C 32015 Myxococcia 0.03 1 0 O 29 Myxococcales 0.03 1 0 O1 80811 Cystobacterineae 0.03 1 0 F 31 Myxococcaceae 0.03 1 1 G 32 Myxococcus 0.23 9 0 D 10239 Viruses 0.23 9 0 D1 2731341 Duplodnaviria 0.23 9 0 K 2731360 Heunggongvirae 0.23 9 0 P 2731618 Uroviricota 0.23 9 0 C 2731619 Caudoviricetes 0.23 9 0 F 2946170 Straboviridae 0.23 9 0 F1 1198136 Tevenvirinae 0.23 9 0 G 10663 Tequatrovirus 0.21 8 0 S 2844208 Tequatrovirus kaw 0.21 8 8 S1 2508180 Escherichia phage vB_EcoM_KAW1E185 0.03 1 0 S 2846203 Tequatrovirus shfml11 0.03 1 1 S1 1863008 Shigella phage SHFML-11