0.01 4 4 U 0 unclassified 99.99 57475 0 R 1 root 99.93 57441 0 R1 131567 cellular organisms 99.93 57441 55847 D 2 Bacteria 1.89 1087 59 P 1224 Pseudomonadota 1.72 988 765 C 1236 Gammaproteobacteria 0.20 114 0 O 72274 Pseudomonadales 0.20 114 0 F 135621 Pseudomonadaceae 0.20 114 1 G 286 Pseudomonas 0.20 113 0 G1 196821 unclassified Pseudomonas 0.20 113 113 S 2892442 Pseudomonas sp. CIP-10 0.11 61 0 O 91347 Enterobacterales 0.10 59 0 F 543 Enterobacteriaceae 0.09 54 0 G 547 Enterobacter 0.08 48 0 G1 2608935 unclassified Enterobacter 0.08 48 48 S 2707174 Enterobacter sp. T2 0.01 6 0 G1 354276 Enterobacter cloacae complex 0.01 6 0 S 158836 Enterobacter hormaechei 0.01 6 6 S1 1296536 Enterobacter hormaechei subsp. xiangfangensis 0.01 4 0 G 590 Salmonella 0.01 4 0 S 28901 Salmonella enterica 0.01 4 0 S1 59201 Salmonella enterica subsp. enterica 0.01 4 4 S2 58712 Salmonella enterica subsp. enterica serovar Anatum 0.00 1 0 G 561 Escherichia 0.00 1 1 S 562 Escherichia coli 0.00 1 0 F 1903410 Pectobacteriaceae 0.00 1 0 G 122277 Pectobacterium 0.00 1 1 S 180957 Pectobacterium brasiliense 0.00 1 0 F 1903411 Yersiniaceae 0.00 1 0 G 613 Serratia 0.00 1 1 S 138074 Serratia symbiotica 0.08 45 0 O 135614 Lysobacterales 0.08 45 0 F 32033 Lysobacteraceae 0.08 45 0 G 40323 Stenotrophomonas 0.08 45 0 G1 995085 Stenotrophomonas maltophilia group 0.08 45 45 S 40324 Stenotrophomonas maltophilia 0.00 2 0 O 135622 Alteromonadales 0.00 2 0 F 267888 Pseudoalteromonadaceae 0.00 2 0 G 53246 Pseudoalteromonas 0.00 2 0 G1 194690 unclassified Pseudoalteromonas 0.00 2 2 S 649161 Pseudoalteromonas sp. 3J6 0.00 1 0 O 2887326 Moraxellales 0.00 1 0 F 468 Moraxellaceae 0.00 1 0 G 469 Acinetobacter 0.00 1 0 G1 196816 unclassified Acinetobacter 0.00 1 1 S 2714110 Acinetobacter sp. Marseille-Q1620 0.06 35 0 C 28211 Alphaproteobacteria 0.06 33 0 O 356 Hyphomicrobiales 0.05 31 0 F 118882 Brucellaceae 0.05 31 0 F1 2826938 Brucella/Ochrobactrum group 0.05 31 0 G 234 Brucella 0.05 31 0 G1 2632610 unclassified Brucella 0.05 31 31 S 2975050 Brucella sp. 1315 0.00 1 0 F 772 Bartonellaceae 0.00 1 0 G 773 Bartonella 0.00 1 1 S 2267275 Bartonella krasnovii 0.00 1 0 F 335928 Xanthobacteraceae 0.00 1 0 G 279 Xanthobacter 0.00 1 1 S 280 Xanthobacter autotrophicus 0.00 2 0 O 766 Rickettsiales 0.00 1 0 F 775 Rickettsiaceae 0.00 1 0 F1 33988 Rickettsieae 0.00 1 0 G 2996317 Candidatus Tisiphia 0.00 1 1 G1 2996318 unclassified Candidatus Tisiphia 0.00 1 0 F 942 Anaplasmataceae 0.00 1 0 G 943 Ehrlichia 0.00 1 0 G1 106178 canis group 0.00 1 1 S 779 Ehrlichia ruminantium 0.01 5 0 C 28216 Betaproteobacteria 0.01 5 0 O 80840 Burkholderiales 0.01 5 0 F 119060 Burkholderiaceae 0.01 3 0 G 106589 Cupriavidus 0.01 3 3 S 164546 Cupriavidus taiwanensis 0.00 1 0 G 32008 Burkholderia 0.00 1 0 G1 87882 Burkholderia cepacia complex 0.00 1 0 S 152500 Burkholderia dolosa 0.00 1 1 S1 1385930 Burkholderia dolosa PC543 0.00 1 0 G 48736 Ralstonia 0.00 1 0 G1 3116862 Ralstonia solanacearum species complex 0.00 1 1 S 305 Ralstonia solanacearum 0.40 230 2 D1 1783272 Terrabacteria group 0.34 197 2 P 1239 Bacillota 0.22 124 2 C 91061 Bacilli 0.21 120 0 O 1385 Bacillales 0.11 66 0 F 186817 Bacillaceae 0.11 64 0 G 1386 Bacillus 0.11 62 0 G1 86661 Bacillus cereus group 0.06 34 34 S 1396 Bacillus cereus 0.05 28 28 S 1392 Bacillus anthracis 0.00 2 0 G1 653685 Bacillus subtilis group 0.00 2 0 G2 1938374 Bacillus amyloliquefaciens group 0.00 2 2 S 492670 Bacillus velezensis 0.00 1 0 G 2675232 Neobacillus 0.00 1 0 G1 2675272 unclassified Neobacillus 0.00 1 1 S 3070679 Neobacillus sp. PS3-40 0.00 1 0 G 459532 Terribacillus 0.00 1 1 S 361277 Terribacillus saccharophilus 0.09 53 0 F 90964 Staphylococcaceae 0.09 53 1 G 1279 Staphylococcus 0.07 43 43 S 29382 Staphylococcus cohnii 0.02 9 9 S 1280 Staphylococcus aureus 0.00 1 0 F 186820 Listeriaceae 0.00 1 0 G 1637 Listeria 0.00 1 1 S 1639 Listeria monocytogenes 0.00 2 0 O 186826 Lactobacillales 0.00 2 0 F 81852 Enterococcaceae 0.00 1 0 G 1350 Enterococcus 0.00 1 1 S 1351 Enterococcus faecalis 0.00 1 0 G 2737 Vagococcus 0.00 1 1 S 2738 Vagococcus fluvialis 0.12 68 0 C 186801 Clostridia 0.07 39 0 O 186802 Eubacteriales 0.05 28 0 F 31979 Clostridiaceae 0.05 28 1 G 1485 Clostridium 0.05 26 26 S 1491 Clostridium botulinum 0.00 1 1 S 1502 Clostridium perfringens 0.01 8 0 F 216572 Oscillospiraceae 0.01 5 3 G 216851 Faecalibacterium 0.00 1 1 S 853 Faecalibacterium prausnitzii 0.00 1 1 S 3030638 Faecalibacterium taiwanense 0.00 1 0 G 244127 Anaerotruncus 0.00 1 1 S 169435 Anaerotruncus colihominis 0.00 1 1 G 292632 Subdoligranulum 0.00 1 0 G 2591381 Dysosmobacter 0.00 1 1 S 2093857 Dysosmobacter welbionis 0.00 1 0 F 3085642 Butyricicoccaceae 0.00 1 0 G 1928820 Intestinibacillus 0.00 1 0 G1 2635293 unclassified Intestinibacillus 0.00 1 1 S 3079303 Intestinibacillus sp. NTUH-41-i26 0.00 1 0 O1 538999 Eubacteriales incertae sedis 0.00 1 1 G 1686313 Fenollaria 0.00 1 0 F 2937909 Desulfitobacteriaceae 0.00 1 0 G 36853 Desulfitobacterium 0.00 1 0 S 233055 Desulfitobacterium dichloroeliminans 0.00 1 1 S1 871963 Desulfitobacterium dichloroeliminans LMG P-21439 0.04 22 0 O 3082720 Peptostreptococcales 0.04 22 0 F 186804 Peptostreptococcaceae 0.04 22 0 G 1849822 Paraclostridium 0.04 22 22 S 1505 Paraclostridium sordellii 0.01 7 0 O 3085636 Lachnospirales 0.01 7 2 F 186803 Lachnospiraceae 0.00 2 0 G 2316020 Mediterraneibacter 0.00 2 0 S 33039 [Ruminococcus] torques 0.00 2 2 S1 657313 [Ruminococcus] torques L2-14 0.00 1 0 G 28050 Lachnospira 0.00 1 1 S 39485 Lachnospira eligens 0.00 1 0 G 33042 Coprococcus 0.00 1 1 S 410072 Coprococcus comes 0.00 1 0 G 1213720 Stomatobaculum 0.00 1 0 G1 2643635 unclassified Stomatobaculum 0.00 1 1 S 3059030 Stomatobaculum sp. F0698 0.00 2 0 C 1737404 Tissierellia 0.00 2 0 O 1737405 Tissierellales 0.00 2 0 F 1570339 Peptoniphilaceae 0.00 2 0 G 31983 Helcococcus 0.00 2 2 S 40091 Helcococcus kunzii 0.00 1 0 C 526524 Erysipelotrichia 0.00 1 0 O 526525 Erysipelotrichales 0.00 1 0 F 128827 Erysipelotrichaceae 0.00 1 0 G 1647 Erysipelothrix 0.00 1 1 S 1514105 Erysipelothrix larvae 0.05 26 0 P 201174 Actinomycetota 0.05 26 0 C 1760 Actinomycetes 0.04 21 0 O 85011 Kitasatosporales 0.04 21 0 F 2062 Streptomycetaceae 0.04 21 1 G 1883 Streptomyces 0.02 14 0 G1 2593676 unclassified Streptomyces 0.01 8 8 S 2099583 Streptomyces sp. ICC1 0.01 4 4 S 2099584 Streptomyces sp. ICC4 0.00 1 1 S 2933779 Streptomyces sp. WAC00303 0.00 1 1 S 477697 Streptomyces sp. T12 0.01 3 3 S 83291 Streptomyces armeniacus 0.00 2 0 G1 2867164 Streptomyces rochei group 0.00 2 2 S 67376 Streptomyces vinaceusdrappus 0.00 1 1 S 436397 Streptomyces sudanensis 0.01 3 0 O 85006 Micrococcales 0.00 2 0 F 1268 Micrococcaceae 0.00 2 0 G 1742989 Glutamicibacter 0.00 2 0 G1 2627139 unclassified Glutamicibacter 0.00 2 2 S 1155384 Glutamicibacter sp. ZJUTW 0.00 1 0 F 85023 Microbacteriaceae 0.00 1 0 G 2034 Curtobacterium 0.00 1 0 G1 257496 unclassified Curtobacterium 0.00 1 1 S 2175655 Curtobacterium sp. MCPF17_052 0.00 1 0 O 85004 Bifidobacteriales 0.00 1 0 F 31953 Bifidobacteriaceae 0.00 1 0 G 1678 Bifidobacterium 0.00 1 0 S 216816 Bifidobacterium longum 0.00 1 1 S1 1679 Bifidobacterium longum subsp. longum 0.00 1 0 O 85007 Mycobacteriales 0.00 1 0 F 85025 Nocardiaceae 0.00 1 0 G 2979332 Prescottella 0.00 1 1 S 43767 Prescottella equi 0.01 5 0 P 200795 Chloroflexota 0.01 5 0 C 32061 Chloroflexia 0.01 5 0 O 3139175 Candidatus Chloroheliales 0.01 5 0 F 3139177 Candidatus Chloroheliaceae 0.01 5 0 G 3139173 Candidatus Chlorohelix 0.01 5 5 S 3003348 Candidatus Chlorohelix allophototropha 0.37 214 0 D1 1783270 FCB group 0.37 214 0 D2 68336 Bacteroidota/Chlorobiota group 0.37 214 0 P 976 Bacteroidota 0.35 200 0 C 200643 Bacteroidia 0.35 200 1 O 171549 Bacteroidales 0.29 166 0 F 815 Bacteroidaceae 0.28 161 0 G 816 Bacteroides 0.25 146 146 S 817 Bacteroides fragilis 0.03 15 15 S 246787 Bacteroides cellulosilyticus 0.01 5 1 G 909656 Phocaeicola 0.00 2 2 S 821 Phocaeicola vulgatus 0.00 1 0 S 376805 Phocaeicola salanitronis 0.00 1 1 S1 667015 Phocaeicola salanitronis DSM 18170 0.00 1 1 S 387090 Phocaeicola coprophilus 0.03 19 0 F 171550 Rikenellaceae 0.03 19 0 G 1647173 Acetobacteroides 0.03 19 0 G1 1760810 environmental samples 0.03 19 19 S 1760811 uncultured Acetobacteroides sp. 0.02 11 1 F 171552 Prevotellaceae 0.01 8 0 G 2974251 Segatella 0.01 8 7 S 165179 Segatella copri 0.00 1 1 S1 537011 Segatella copri DSM 18205 0.00 1 1 G 838 Prevotella 0.00 1 0 G 558436 Xylanibacter 0.00 1 1 S 839 Xylanibacter ruminicola 0.00 2 0 F 2005525 Tannerellaceae 0.00 2 0 G 375288 Parabacteroides 0.00 1 1 S 46503 Parabacteroides merdae 0.00 1 0 G1 2649774 unclassified Parabacteroides 0.00 1 1 S 2951805 Parabacteroides sp. AD58 0.00 1 0 F 2005520 Dysgonomonadaceae 0.00 1 0 G 307628 Petrimonas 0.00 1 1 S 1642646 Petrimonas mucosa 0.02 13 0 C 117743 Flavobacteriia 0.02 13 0 O 200644 Flavobacteriales 0.02 10 0 F 2762318 Weeksellaceae 0.02 10 10 G 308865 Elizabethkingia 0.01 3 0 F 49546 Flavobacteriaceae 0.00 1 0 G 3085669 Paenimyroides 0.00 1 1 S 2968490 Paenimyroides aestuarii 0.00 1 1 G 52959 Polaribacter 0.00 1 0 G 237 Flavobacterium 0.00 1 1 S 683124 Flavobacterium haoranii 0.00 1 0 C 768503 Cytophagia 0.00 1 0 O 768507 Cytophagales 0.00 1 0 F 1853232 Hymenobacteraceae 0.00 1 0 G 89966 Hymenobacter 0.00 1 0 G1 2615202 unclassified Hymenobacter 0.00 1 1 S 2584940 Hymenobacter sp. DG01 0.09 52 0 P 29547 Campylobacterota 0.09 52 0 C 3031852 Epsilonproteobacteria 0.09 52 50 O 213849 Campylobacterales 0.00 1 0 F 72293 Helicobacteraceae 0.00 1 0 G 209 Helicobacter 0.00 1 1 S 213 Helicobacter cinaedi 0.00 1 0 F 72294 Campylobacteraceae 0.00 1 1 G 194 Campylobacter 0.01 7 0 P 203691 Spirochaetota 0.01 7 0 C 203692 Spirochaetia 0.01 7 0 O 136 Spirochaetales 0.01 7 0 F 1643685 Borreliaceae 0.01 7 0 G 64895 Borreliella 0.01 7 7 S 29519 Borreliella garinii 0.01 4 0 P 32066 Fusobacteriota 0.01 4 0 C 203490 Fusobacteriia 0.01 4 0 O 203491 Fusobacteriales 0.01 4 0 F 203492 Fusobacteriaceae 0.01 4 4 G 848 Fusobacterium 0.06 34 0 D 10239 Viruses 0.06 34 0 D1 2559587 Riboviria 0.06 34 0 K 2732396 Orthornavirae 0.06 34 0 P 2732408 Pisuviricota 0.06 34 0 C 2732506 Pisoniviricetes 0.06 34 0 O 76804 Nidovirales 0.06 34 0 O1 2499399 Cornidovirineae 0.06 34 0 F 11118 Coronaviridae 0.06 34 0 F1 2501931 Orthocoronavirinae 0.06 34 0 G 694002 Betacoronavirus 0.06 34 0 G1 2509511 Sarbecovirus 0.06 34 0 S 694009 Severe acute respiratory syndrome-related coronavirus 0.06 34 0 S1 2901879 Severe acute respiratory syndrome coronavirus 0.06 34 34 S2 227984 SARS coronavirus Tor2